FFCP PHASE1:Hg19::chr11:66083107..66083156,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:66083107..66083156,- to FFCP PHASE1:Hg19::chr11:66083107..66083156,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57124 | |EntrezGene=57124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=18219 | |HGNC=18219 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCU0 | |UniProt=Q9HCU0 | ||
|association_with_transcript=480bp_to_AK027290_5end | |||
|cluster_id=chr11:66083107..66083156,- | |||
|coexpression_cluster_id=C563 | |||
|description=CAGE_peak_4_at_CD248_5end | |||
|id=chr11:66083107..66083156,- | |||
|ontology_enrichment_celltype=CL:0000055!1.70e-29!180;CL:0000057!1.50e-28!75;CL:0000183!2.40e-14!59;CL:0000187!1.66e-13!54;CL:0000680!8.95e-13!57;CL:0000056!8.95e-13!57;CL:0000355!8.95e-13!57;CL:0002620!3.62e-12!23;CL:0000048!1.10e-10!430;CL:0000393!1.38e-10!60;CL:0000211!1.38e-10!60;CL:0002334!5.45e-10!12;CL:0000192!6.74e-10!42;CL:0000514!6.74e-10!42;CL:0000723!8.03e-10!436;CL:0000034!5.95e-09!444;CL:0000136!1.63e-08!15;CL:0002570!8.17e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.85e-13;12!CL:0002620;9.61e-13;23!CL:0000057;5.86e-11;73!CL:0000134;1.09e-10;55!CL:0000723;1.95e-10;61!CL:0000048;3.88e-09;58!CL:0002320;6.27e-09;188!CL:0000349;1.55e-08;19!CL:0002570;1.19e-07;8!CL:0000034;2.40e-07;69!CL:0000187;3.86e-07;55!CL:0002559;6.11e-07;5!CL:0000499;8.43e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.98e-31,76;CL:0000048,2.56e-19,427;CL:0000723,1.84e-18,433;CL:0000034,2.32e-17,441;CL:0002334,1.64e-13,12;CL:0002320,5.69e-13,361;CL:0002620,1.08e-12,23;CL:0000187,3.88e-11,55;CL:0000680,8.22e-11,58;CL:0000056,8.22e-11,58;CL:0000355,8.22e-11,58;CL:0000134,1.58e-10,354;CL:0000393,3.99e-09,61;CL:0000211,3.99e-09,61;CL:0000192,1.85e-08,43;CL:0000514,1.85e-08,43;CL:0000349,2.13e-08,19;CL:0000136,3.56e-08,15;CL:0000219,3.69e-08,386;CL:0002570,1.25e-07,8;CL:0002559,5.86e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000355;5.60e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.85e-18!83;UBERON:0002329!5.85e-18!83;UBERON:0003077!5.85e-18!83;UBERON:0003059!5.85e-18!83;UBERON:0007282!5.85e-18!83;UBERON:0009618!5.85e-18!83;UBERON:0007285!5.85e-18!83;UBERON:0004290!2.52e-16!70;UBERON:0000486!1.96e-13!82;UBERON:0002385!2.31e-13!63;UBERON:0001015!2.31e-13!63;UBERON:0000383!2.31e-13!63;UBERON:0001134!5.14e-13!61;UBERON:0002036!5.14e-13!61;UBERON:0003082!5.14e-13!61;UBERON:0002199!3.73e-11!45;UBERON:0002416!3.73e-11!45;UBERON:0003102!5.31e-10!95;UBERON:0005256!1.30e-09!143;UBERON:0004923!2.18e-09!57;UBERON:0002097!2.35e-09!40;UBERON:0001013!1.12e-08!14;UBERON:0000478!5.29e-08!24;UBERON:0005631!1.78e-07!14;UBERON:0000158!1.78e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.43e-10;14!UBERON:0002384;1.68e-10;198!UBERON:0002199;3.63e-10;46!UBERON:0002416;3.63e-10;46!UBERON:0002097;5.00e-10;41!UBERON:0004457;9.71e-09;9!UBERON:0000042;9.71e-09;9!UBERON:0003102;1.59e-08;50!UBERON:0000478;5.00e-08;24!UBERON:0003688;7.03e-08;6!UBERON:0002358;7.03e-08;6!UBERON:0003684;7.03e-08;6!UBERON:0001178;7.03e-08;6!UBERON:0002073;6.11e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.15e-15,46;UBERON:0002416,2.15e-15,46;UBERON:0002384,3.74e-13,371;UBERON:0002097,1.19e-12,41;UBERON:0007524,2.42e-12,73;UBERON:0003102,4.19e-12,99;UBERON:0002329,5.32e-12,71;UBERON:0003059,5.32e-12,71;UBERON:0007282,5.32e-12,71;UBERON:0004290,5.32e-12,71;UBERON:0009618,5.32e-12,71;UBERON:0003077,1.13e-11,72;UBERON:0007285,1.13e-11,72;UBERON:0001013,1.06e-10,14;UBERON:0000486,2.40e-10,83;UBERON:0001134,2.58e-10,62;UBERON:0002036,2.58e-10,62;UBERON:0003082,2.58e-10,62;UBERON:0004923,6.44e-10,66;UBERON:0007503,6.62e-10,78;UBERON:0002385,1.09e-09,64;UBERON:0001015,1.09e-09,64;UBERON:0000383,1.09e-09,64;UBERON:0005631,6.08e-08,14;UBERON:0000158,6.08e-08,14;UBERON:0000478,6.11e-08,24;UBERON:0003688,8.35e-08,6;UBERON:0002358,8.35e-08,6;UBERON:0003684,8.35e-08,6;UBERON:0001178,8.35e-08,6;UBERON:0005256,2.25e-07,122;UBERON:0002073,5.86e-07,5;UBERON:0005086,5.86e-07,5 | |||
|phase1_expression=7.08545679155171,17.7703434829516,8.3163098416623,6.00439790118782,7.59833860526389,7.85104671690332,0,6.94891860769514,12.0145388971926,0.737201809504527,0,3.27662058195258,1.05506791291381,3.46545788288131,2.31978163009541,2.6893005858071,2.41077811209591,0,1.95173119516203,0.492484232307152,0,0,1.14494394852423,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,17.0664806419773,0.670700859703636,0.767175371061182,2.53007406669196,2.00535164254356,1.59331170856906,0.795285947051099,0,0.189069634328136,0.221729397462564,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.424298792383,0.886413581652058,1.72131935057184,21.512746556161,4.25602058638028,1.68203280042692,0,0.49333509683432,0.933633106199299,0.269421344139376,0.326923806226917,4.99479511228274,5.76175924479999,0.468642863667593,4.68240115245481,0.570471821544449,2.54062756938062,0.704606991862589,0.485618833104395,0.140450806702248,3.0623125688234,1.96534907698829,7.95608515053394,3.56400857184616,7.91254173691382,3.64064544775211,3.59309070908119,1.0100166837244,1.87677779807946,1.38532057742091,3.5118209670467,2.45190236639216,1.95309476578576,0.113432183160021,19.9122495614637,5.12537733164562,4.23863802319124,6.90209520994125,5.5648365788757,7.9868567414145,7.63079110959518,7.08860595413318,4.18979122193154,11.3595198409852,3.31379635112278,7.59736467048416,24.4956618836464,6.54888638479662,7.29110546935097,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,6.25798129319264,21.8701918985581,6.90674606762403,8.8229906326076,13.7157101517221,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,4.41026134156626,0,0,0,0,0,0.857839051492628,0,0,0,0,1.3032332212413,0,0,0,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0,2.35475277125258,2.61576041299968,2.27348686044945,1.42198887333556,25.0359512096318,3.381211010224,6.64845291462176,9.36066932202295,1.02882949704857,0,4.26275486425759,5.29018576535146,14.1081617401775,3.29296134712308,0.65147236858747,2.48774364119782,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0.718874566474748,1.14861935834114,0,1.44781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,1.96306386750624,5.50187573165645,1.89885516589815,3.32753378449291,12.3116002270042,6.78120384645919,3.63138386477411,3.31040709700491,4.5481500811197,0,1.99267679560631,2.02806085395873,5.90808578382963,6.85304051119592,5.83343820478455,0,0,0.213455115606889,3.33440328590885,6.65741758041988,9.97887967987945,12.4053903909388,3.52962538562544,11.507063871756,10.6355493882232,8.18731598506726,8.20354997832398,2.96836132889982,7.09364591492216,7.63515418846446,5.33826514089759,13.5006151587741,8.71577838449694,0,0,0,0.459257792658427,4.55227920016793,2.36023946926963,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0,4.82051789532479,1.35339005608971,1.54048617114644,3.68408819342711,0.827019434907183,3.22260734604821,4.93056759308377,1.44885266607372,3.11612124763581,0,0,0,0,1.85938219718914,17.6294914225158,2.0911118104818,0,1.06461206063404,0,0.74129687641568,0,1.48863347743867,3.48017367190598,2.66882271493355,6.14154699147201,14.9778645811872,4.77304871888905,0,1.2591072030832,2.74537029736055,1.53156123049392,0.404364963146632,0,0.421258456238981,2.43816869544795,0.243713489631284,1.05650146756755,3.68549760801562,6.36324443791707,6.78048699721457,1.10273068709225,0,0.438450885253763,6.94530641120025,4.59126326432643,0.608731130888112,0.92947049429925,2.81695602532241,0.430234056612155,0.982490410131212,0.7133421029625,3.90237170477658,8.86652068250189,15.8061548620753,1.51789269506286,3.49934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,1.19372242368845,0.296964680832639,0.614321404198464,0,0.281338832821026,0.111308705022906,0,0,0.398495976502139,0.552567831062295,0,0,0,4.97663340258892,0,0,0,0.986434056369336,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.923403102045565,0,0,0,0,1.91400695839152,2.28993983504656,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,0,0.30607276163049,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,3.31980669659857,0,0,0,0,0.387956065953678,0,0.677942222341597,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0.223171457441873,0.268733889946905,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p4@CD248 | |||
}} | }} |
Latest revision as of 13:56, 19 September 2015
Short description: | p4@CD248 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD248_5end |
Coexpression cluster: | C563_Mesenchymal_Fibroblast_Adipocyte_tenocyte_Placental_Hair_Synoviocyte |
Association with transcript: | 480bp_to_AK027290_5end |
EntrezGene: | CD248 |
HGNC: | 18219 |
UniProt: | Q9HCU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.98e-31 | 76 |
multi fate stem cell | 2.56e-19 | 427 |
somatic stem cell | 1.84e-18 | 433 |
stem cell | 2.32e-17 | 441 |
preadipocyte | 1.64e-13 | 12 |
connective tissue cell | 5.69e-13 | 361 |
skin fibroblast | 1.08e-12 | 23 |
muscle cell | 3.88e-11 | 55 |
muscle precursor cell | 8.22e-11 | 58 |
myoblast | 8.22e-11 | 58 |
multi-potent skeletal muscle stem cell | 8.22e-11 | 58 |
mesenchymal cell | 1.58e-10 | 354 |
electrically responsive cell | 3.99e-09 | 61 |
electrically active cell | 3.99e-09 | 61 |
smooth muscle cell | 1.85e-08 | 43 |
smooth muscle myoblast | 1.85e-08 | 43 |
extraembryonic cell | 2.13e-08 | 19 |
fat cell | 3.56e-08 | 15 |
motile cell | 3.69e-08 | 386 |
mesenchymal stem cell of adipose | 1.25e-07 | 8 |
hair follicle cell | 5.86e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
integument | 2.15e-15 | 46 |
integumental system | 2.15e-15 | 46 |
connective tissue | 3.74e-13 | 371 |
skin of body | 1.19e-12 | 41 |
dense mesenchyme tissue | 2.42e-12 | 73 |
surface structure | 4.19e-12 | 99 |
somite | 5.32e-12 | 71 |
presomitic mesoderm | 5.32e-12 | 71 |
presumptive segmental plate | 5.32e-12 | 71 |
dermomyotome | 5.32e-12 | 71 |
trunk paraxial mesoderm | 5.32e-12 | 71 |
paraxial mesoderm | 1.13e-11 | 72 |
presumptive paraxial mesoderm | 1.13e-11 | 72 |
adipose tissue | 1.06e-10 | 14 |
multilaminar epithelium | 2.40e-10 | 83 |
skeletal muscle tissue | 2.58e-10 | 62 |
striated muscle tissue | 2.58e-10 | 62 |
myotome | 2.58e-10 | 62 |
organ component layer | 6.44e-10 | 66 |
epithelial vesicle | 6.62e-10 | 78 |
muscle tissue | 1.09e-09 | 64 |
musculature | 1.09e-09 | 64 |
musculature of body | 1.09e-09 | 64 |
extraembryonic membrane | 6.08e-08 | 14 |
membranous layer | 6.08e-08 | 14 |
extraembryonic structure | 6.11e-08 | 24 |
omentum | 8.35e-08 | 6 |
peritoneum | 8.35e-08 | 6 |
abdominal cavity | 8.35e-08 | 6 |
visceral peritoneum | 8.35e-08 | 6 |
trunk mesenchyme | 2.25e-07 | 122 |
hair follicle | 5.86e-07 | 5 |
hair follicle placode | 5.86e-07 | 5 |