FFCP PHASE1:Hg19::chr12:26624724..26624760,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:26624724..26624760,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr12:26624724..26624760,+ | |||
|id=chr12:26624724..26624760,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.86e-58!42;CL:0000860!9.09e-54!45;CL:0002194!2.41e-36!63;CL:0000576!2.41e-36!63;CL:0000040!2.41e-36!63;CL:0000559!2.41e-36!63;CL:0002009!4.29e-35!65;CL:0000766!2.44e-32!76;CL:0000839!2.82e-32!70;CL:0000557!9.28e-32!71;CL:0002087!8.38e-23!119;CL:0000763!2.05e-22!112;CL:0000049!2.05e-22!112;CL:0000738!2.23e-20!140;CL:0002031!9.20e-20!124;CL:0000037!5.06e-17!172;CL:0000566!5.06e-17!172;CL:0002032!1.91e-16!165;CL:0000837!1.91e-16!165;CL:0000988!8.94e-16!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.72e-53;33!CL:0002057;1.72e-53;33!CL:0000473;6.58e-40;39!CL:0000234;6.58e-40;39!CL:0000576;2.86e-30;48!CL:0000766;1.08e-11;69!CL:0002593;1.86e-09;2!CL:0000763;2.08e-09;100!CL:0002087;9.61e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.10e-46,42;CL:0002057,1.10e-46,42;CL:0000473,8.92e-41,48;CL:0000234,8.92e-41,48;CL:0002194,1.70e-32,59;CL:0000576,1.70e-32,59;CL:0000040,1.70e-32,59;CL:0000559,1.70e-32,59;CL:0002009,1.99e-31,61;CL:0000839,4.95e-29,66;CL:0000557,1.35e-28,67;CL:0000766,1.37e-26,72;CL:0000763,1.47e-17,108;CL:0000049,1.47e-17,108;CL:0002087,1.89e-16,115;CL:0002031,9.79e-16,120;CL:0000738,8.47e-14,136;CL:0002032,1.57e-11,161;CL:0000837,1.57e-11,161;CL:0000037,5.14e-11,168;CL:0000988,2.07e-10,177;CL:0002593,2.02e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.25e-38;42!CL:0000049;1.23e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.70e-30!80;UBERON:0001474!4.87e-28!86;UBERON:0002390!1.54e-27!102;UBERON:0003061!1.54e-27!102;UBERON:0002193!1.29e-24!112;UBERON:0004765!3.67e-23!101;UBERON:0001434!3.67e-23!101;UBERON:0002405!9.49e-20!115;UBERON:0002204!9.23e-15!167;UBERON:0003081!1.93e-12!216;UBERON:0002298!2.59e-10!8;UBERON:0006331!8.88e-08!3;UBERON:0000988!1.34e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.86e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.59e-25,76;UBERON:0001474,2.67e-23,82;UBERON:0004765,3.47e-21,90;UBERON:0002405,1.74e-20,93;UBERON:0002390,2.06e-19,98;UBERON:0003061,2.06e-19,98;UBERON:0001434,5.18e-19,100;UBERON:0002193,1.47e-17,108;UBERON:0002204,2.60e-13,167;UBERON:0003081,8.49e-11,203;UBERON:0002456,2.02e-09,2 | |||
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|short_description=p@chr12:26624724..26624760,+ | |||
}} | }} |
Latest revision as of 07:50, 24 July 2015
Short description: | p@chr12:26624724..26624760, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:26624724..26624760, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.10e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-46 | 42 |
defensive cell | 8.92e-41 | 48 |
phagocyte | 8.92e-41 | 48 |
monopoietic cell | 1.70e-32 | 59 |
monocyte | 1.70e-32 | 59 |
monoblast | 1.70e-32 | 59 |
promonocyte | 1.70e-32 | 59 |
macrophage dendritic cell progenitor | 1.99e-31 | 61 |
myeloid lineage restricted progenitor cell | 4.95e-29 | 66 |
granulocyte monocyte progenitor cell | 1.35e-28 | 67 |
myeloid leukocyte | 1.37e-26 | 72 |
myeloid cell | 1.47e-17 | 108 |
common myeloid progenitor | 1.47e-17 | 108 |
nongranular leukocyte | 1.89e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 9.79e-16 | 120 |
leukocyte | 8.47e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.57e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-11 | 161 |
hematopoietic stem cell | 5.14e-11 | 168 |
hematopoietic cell | 2.07e-10 | 177 |
smooth muscle cell of the internal thoracic artery | 2.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.59e-25 | 76 |
bone element | 2.67e-23 | 82 |
skeletal element | 3.47e-21 | 90 |
immune system | 1.74e-20 | 93 |
hematopoietic system | 2.06e-19 | 98 |
blood island | 2.06e-19 | 98 |
skeletal system | 5.18e-19 | 100 |
hemolymphoid system | 1.47e-17 | 108 |
musculoskeletal system | 2.60e-13 | 167 |
lateral plate mesoderm | 8.49e-11 | 203 |
internal thoracic artery | 2.02e-09 | 2 |