FFCP PHASE1:Hg19::chr14:101415932..101415935,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:101415932..101415935,+ to FFCP PHASE1:Hg19::chr14:101415932..101415935,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=767577 | |EntrezGene=767577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=32989 | |HGNC=32989 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-234bp_to_NR_003193,uc001yir.2_5end | |||
|cluster_id=chr14:101415932..101415935,+ | |||
|description=CAGE_peak_2_at_SNORD114-1_5end | |||
|id=chr14:101415932..101415935,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.45e-14!180;CL:0000680!1.36e-12!57;CL:0000056!1.36e-12!57;CL:0000355!1.36e-12!57;CL:0000183!1.13e-11!59;CL:0000187!2.25e-11!54;CL:0000192!2.35e-11!42;CL:0000514!2.35e-11!42;CL:0000393!5.58e-09!60;CL:0000211!5.58e-09!60;CL:0000359!1.53e-08!32;CL:0000222!1.82e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.35e-14;19!CL:0002569;1.67e-10;6!CL:0002577;6.83e-09;3!CL:0000192;3.29e-07;43!CL:0000138;4.27e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.05e-14,19;CL:0002569,2.06e-10,6;CL:0000192,2.05e-09,43;CL:0000514,2.05e-09,43;CL:0002577,4.12e-09,3;CL:0000187,7.38e-09,55;CL:0000680,3.40e-08,58;CL:0000056,3.40e-08,58;CL:0000355,3.40e-08,58;CL:0000393,1.34e-07,61;CL:0000211,1.34e-07,61;CL:0000058,3.10e-07,6;CL:0000138,3.10e-07,6;CL:0000359,3.19e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;3.29e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.11e-13!61;UBERON:0002036!1.11e-13!61;UBERON:0003082!1.11e-13!61;UBERON:0002385!2.55e-13!63;UBERON:0001015!2.55e-13!63;UBERON:0000383!2.55e-13!63;UBERON:0000486!4.20e-13!82;UBERON:0004290!6.02e-12!70;UBERON:0000914!1.45e-11!83;UBERON:0002329!1.45e-11!83;UBERON:0003077!1.45e-11!83;UBERON:0003059!1.45e-11!83;UBERON:0007282!1.45e-11!83;UBERON:0009618!1.45e-11!83;UBERON:0007285!1.45e-11!83;UBERON:0000475!1.86e-10!365;UBERON:0002049!2.95e-08!79;UBERON:0007798!2.95e-08!79;UBERON:0000481!1.20e-07!347;UBERON:0004872!2.15e-07!84;UBERON:0000119!7.63e-07!312;UBERON:0000055!8.91e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.17e-13;24!UBERON:0001987;2.17e-11;4!UBERON:0003422;1.67e-10;6!UBERON:0003104;6.05e-09;7!UBERON:0009142;6.05e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,3.77e-13,24;UBERON:0001987,1.35e-11,4;UBERON:0004340,1.35e-11,4;UBERON:0003422,2.06e-10,6;UBERON:0001134,7.85e-10,62;UBERON:0002036,7.85e-10,62;UBERON:0003082,7.85e-10,62;UBERON:0002385,2.23e-09,64;UBERON:0001015,2.23e-09,64;UBERON:0000383,2.23e-09,64;UBERON:0002329,4.86e-09,71;UBERON:0003059,4.86e-09,71;UBERON:0007282,4.86e-09,71;UBERON:0004290,4.86e-09,71;UBERON:0009618,4.86e-09,71;UBERON:0003077,7.57e-09,72;UBERON:0007285,7.57e-09,72;UBERON:0007524,1.16e-08,73;UBERON:0005631,1.31e-08,14;UBERON:0000158,1.31e-08,14;UBERON:0007503,8.39e-08,78;UBERON:0000486,4.69e-07,83 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,1.26343974685366,0,0.245733936501509,0,3.71350332621293,0.263766978228454,1.36142988256051,0.331397375727916,0,0,0.730310090387373,0.975865597581014,2.09305798730539,0,1.88072832886853,0.286235987131057,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,1.44575660953827,7.52006865953834,0.869079113764942,2.3858578411533,0.973269740605272,0.378139268656271,0,0.175669571386252,0.261958150995425,1.82147644146271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,1.42306505074684,1.00416183829401,0,1.52054421143703,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,8.474187572046,0.573673241497627,0,0.560677600142307,0,0,0.622422070799533,0.134710672069688,0,2.27036141467397,0,0.468642863667593,0,0,0,0.117434498643765,0.161872944368132,0,0.61246251376468,0.245668634623536,0,1.18800285728205,0,1.82032272387605,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0.635795703478686,0,0.412210116953756,0.257640540045629,0.744467425326359,5.06328996723799,0.0974370051611986,0.252433774244115,1.10459878370759,0.646584227275248,0.355009592516614,0.705264687593482,1.18692414617341,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,1.1240175325762,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.821860859650752,0.721832238805369,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,1.34557301214433,0,0.36669142910475,1.16344544182,0,0,1.32969058292435,0,0,0,0.532844358032199,0.857867961948885,7.05408087008876,1.64648067356154,0.65147236858747,0.355391948742546,0.791951872933429,1.20575750823834,0,0.199945982364114,0,0,0,2.63587341040741,1.14861935834114,0,0.579125226670317,0.410952645100767,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.736148950314839,0,0.271265023699736,1.45579603071565,1.78428988797162,0.946214490203608,0.702848489956279,3.61135319673263,2.27407504055985,0,0.664225598535437,0.184369168541703,1.30325421702124,2.34961388955289,0,0,0,0,24.2502057157008,4.99306318531491,1.81434175997808,0,4.14347327877769,0.280660094433074,1.66580894032411,0,0.482561763430822,0,0,0.177561725313127,0.739144404124282,0.519254429183621,0.232420756919918,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0.655622074797121,0,0.231046011313244,0,0,0,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,1.6068392984416,1.54673149267395,0,0.15350367472613,0,0.537101224341368,0.145016693914229,0.0852266274161009,2.04773681987496,0,0,0.382838137483752,0,0,0.62962469366128,0.6970372701606,2.46426864140871,1.06461206063404,1.73986598415015,2.03856641014312,0.143124886741991,0.744316738719335,0.632758849437452,0,2.04718233049067,0.42793898803392,2.86382923133343,0,0.899362287916574,0,0.117812402345686,3.43710218674637,0,0,1.46290121726877,0.243713489631284,0,0.818999468447914,0.282810863907425,1.13008116620243,3.85955740482287,0,0.876901770507525,1.73632660280006,0,1.62328301570163,0.6196469961995,0.281695602532241,1.00387946542836,0.982490410131212,1.78335525740625,1.06428319221179,0.422215270595328,0.329294892959902,1.89736586882858,0,0.192444225451024,0,0,1.31801321087491,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,2.37571744666111,0,0,0.140669416410513,0,0,0.844501632511974,0.19924798825107,0.276283915531148,0,0.409074730008619,0,2.17727711363265,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.331737779793674,0.591095237907095,0,0,0.697118721393016,1.30815439456455,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,3.81447789552909,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0,3.21031058919516,0.234264445725339,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,2.23581842213102,0,0,0,0.0969890164884194,1.6768664071385,0.225980740780532,0,0,0.0633107959558787,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.485996453264197,0,0.157611414598396,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0.146552233678082,2.65013777824443,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.3755727921195,0,0.110929051536852,0.248385611765534,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,1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| ||
|short_description=p2@SNORD114-1 | |||
}} | }} |
Latest revision as of 12:01, 18 September 2015
Short description: | p2@SNORD114-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNORD114-1_5end |
Coexpression cluster: | NA |
Association with transcript: | -234bp_to_NR_003193, uc001yir.2_5end |
EntrezGene: | SNORD114-1 |
HGNC: | 32989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.05e-14 | 19 |
mesenchymal stem cell of umbilical cord | 2.06e-10 | 6 |
smooth muscle cell | 2.05e-09 | 43 |
smooth muscle myoblast | 2.05e-09 | 43 |
placental epithelial cell | 4.12e-09 | 3 |
muscle cell | 7.38e-09 | 55 |
muscle precursor cell | 3.40e-08 | 58 |
myoblast | 3.40e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.40e-08 | 58 |
electrically responsive cell | 1.34e-07 | 61 |
electrically active cell | 1.34e-07 | 61 |
chondroblast | 3.10e-07 | 6 |
chondrocyte | 3.10e-07 | 6 |
vascular associated smooth muscle cell | 3.19e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 3.77e-13 | 24 |
placenta | 1.35e-11 | 4 |
allantois | 1.35e-11 | 4 |
mesenchyme of umbilical cord | 2.06e-10 | 6 |
skeletal muscle tissue | 7.85e-10 | 62 |
striated muscle tissue | 7.85e-10 | 62 |
myotome | 7.85e-10 | 62 |
muscle tissue | 2.23e-09 | 64 |
musculature | 2.23e-09 | 64 |
musculature of body | 2.23e-09 | 64 |
somite | 4.86e-09 | 71 |
presomitic mesoderm | 4.86e-09 | 71 |
presumptive segmental plate | 4.86e-09 | 71 |
dermomyotome | 4.86e-09 | 71 |
trunk paraxial mesoderm | 4.86e-09 | 71 |
paraxial mesoderm | 7.57e-09 | 72 |
presumptive paraxial mesoderm | 7.57e-09 | 72 |
dense mesenchyme tissue | 1.16e-08 | 73 |
extraembryonic membrane | 1.31e-08 | 14 |
membranous layer | 1.31e-08 | 14 |
epithelial vesicle | 8.39e-08 | 78 |
multilaminar epithelium | 4.69e-07 | 83 |