FFCP PHASE1:Hg19::chr14:60072110..60072126,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6252 | |EntrezGene=6252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10467 | |HGNC=10467 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=100bp_to_ENST00000490111_5end | |||
|cluster_id=chr14:60072110..60072126,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_13_at_RTN1_5end | |||
|id=chr14:60072110..60072126,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.14e-15;3!UBERON:0006238;9.26e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.87e-70!57;UBERON:0005068!1.87e-70!57;UBERON:0006241!1.87e-70!57;UBERON:0007135!1.87e-70!57;UBERON:0002020!1.40e-69!34;UBERON:0003528!1.40e-69!34;UBERON:0001017!1.93e-68!82;UBERON:0005743!1.19e-67!86;UBERON:0000073!1.93e-65!94;UBERON:0001016!1.93e-65!94;UBERON:0001893!3.48e-65!34;UBERON:0001869!5.25e-65!32;UBERON:0002616!3.45e-64!59;UBERON:0002791!1.52e-62!33;UBERON:0000955!2.37e-62!69;UBERON:0006238!2.37e-62!69;UBERON:0002780!3.46e-60!41;UBERON:0001890!3.46e-60!41;UBERON:0006240!3.46e-60!41;UBERON:0003080!1.44e-58!42;UBERON:0000956!2.01e-57!25;UBERON:0000203!2.01e-57!25;UBERON:0001950!5.10e-56!20;UBERON:0002619!1.02e-55!22;UBERON:0003075!1.75e-50!86;UBERON:0007284!1.75e-50!86;UBERON:0002346!9.92e-48!90;UBERON:0003056!5.89e-43!61;UBERON:0000033!1.86e-37!123;UBERON:0000153!3.67e-35!129;UBERON:0007811!3.67e-35!129;UBERON:0004121!5.22e-34!169;UBERON:0007023!3.83e-33!115;UBERON:0000924!6.40e-33!173;UBERON:0006601!6.40e-33!173;UBERON:0001871!8.50e-22!7;UBERON:0000025!3.90e-18!194;UBERON:0000200!4.73e-17!6;UBERON:0002021!6.89e-15!5;UBERON:0001872!7.93e-15!5;UBERON:0002420!4.08e-14!9;UBERON:0007245!4.08e-14!9;UBERON:0010009!4.08e-14!9;UBERON:0010011!4.08e-14!9;UBERON:0000454!4.08e-14!9;UBERON:0002308!8.83e-14!9;UBERON:0000125!8.83e-14!9;UBERON:0004733!2.82e-13!12;UBERON:0002028!2.82e-13!12;UBERON:0007277!2.82e-13!12;UBERON:0004111!3.22e-13!241;UBERON:0000064!4.17e-13!219;UBERON:0003076!4.58e-13!15;UBERON:0003057!4.58e-13!15;UBERON:0004732!3.83e-12!13;UBERON:0002298!2.33e-11!8;UBERON:0002680!1.23e-10!9;UBERON:0001895!1.23e-10!9;UBERON:0010092!1.23e-10!9;UBERON:0000477!4.57e-10!286;UBERON:0009663!2.09e-09!7;UBERON:0000349!2.29e-09!5;UBERON:0000483!4.89e-09!309;UBERON:0002771!5.80e-09!3;UBERON:0000119!7.68e-09!312;UBERON:0000988!8.94e-09!3;UBERON:0006331!1.08e-08!3;UBERON:0000475!3.51e-08!365;UBERON:0001870!5.60e-07!2;UBERON:0001876!7.46e-07!2;UBERON:0000369!8.99e-07!4;UBERON:0002435!8.99e-07!4;UBERON:0000204!8.99e-07!4;UBERON:0010082!8.99e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.96e-51;20!UBERON:0002619;1.06e-46;22!UBERON:0000956;3.48e-41;25!UBERON:0000203;3.48e-41;25!UBERON:0002791;7.44e-38;32!UBERON:0001869;7.44e-38;32!UBERON:0003528;1.42e-32;34!UBERON:0002020;1.42e-32;34!UBERON:0001893;9.19e-32;34!UBERON:0000955;1.43e-22;68!UBERON:0002780;6.29e-21;41!UBERON:0001890;6.29e-21;41!UBERON:0001872;1.80e-20;5!UBERON:0002021;2.43e-20;5!UBERON:0001017;1.77e-19;75!UBERON:0000073;3.16e-18;53!UBERON:0002616;3.16e-18;53!UBERON:0000200;1.75e-17;6!UBERON:0001016;1.44e-16;83!UBERON:0001871;4.92e-15;6!UBERON:0002581;3.08e-12;1!UBERON:0001874;3.08e-12;1!UBERON:0002037;2.71e-08;6!UBERON:0002771;4.55e-07;2!UBERON:0002702;5.26e-07;2!UBERON:0001876;5.90e-07;2!UBERON:0011216;6.27e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.34e-51,20;UBERON:0002619,8.51e-47,22;UBERON:0000956,2.87e-41,25;UBERON:0000203,2.87e-41,25;UBERON:0002791,5.93e-39,32;UBERON:0001869,5.93e-39,32;UBERON:0000955,2.44e-38,68;UBERON:0006238,2.44e-38,68;UBERON:0003528,1.19e-36,34;UBERON:0002020,1.19e-36,34;UBERON:0001893,1.19e-36,34;UBERON:0001017,2.26e-36,81;UBERON:0000073,1.09e-32,53;UBERON:0002616,1.09e-32,53;UBERON:0001016,1.28e-32,89;UBERON:0001049,6.99e-31,56;UBERON:0005068,6.99e-31,56;UBERON:0006241,6.99e-31,56;UBERON:0007135,6.99e-31,56;UBERON:0002780,2.57e-30,41;UBERON:0001890,2.57e-30,41;UBERON:0003080,2.57e-30,41;UBERON:0006240,2.57e-30,41;UBERON:0003075,1.15e-20,82;UBERON:0007284,1.15e-20,82;UBERON:0001872,1.53e-20,5;UBERON:0002021,1.63e-20,5;UBERON:0003056,4.42e-20,61;UBERON:0002346,1.23e-19,86;UBERON:0000200,1.80e-17,6;UBERON:0004121,2.98e-16,171;UBERON:0000924,2.98e-16,171;UBERON:0006601,2.98e-16,171;UBERON:0010371,5.82e-16,104;UBERON:0001871,5.82e-15,6;UBERON:0007023,2.59e-12,114;UBERON:0002581,3.08e-12,1;UBERON:0010314,3.26e-12,132;UBERON:0001874,4.81e-12,1;UBERON:0011216,6.20e-12,223;UBERON:0002037,2.91e-08,6;UBERON:0006215,2.91e-08,6;UBERON:0000025,8.01e-08,192;UBERON:0002771,4.56e-07,2;UBERON:0002702,5.41e-07,2;UBERON:0001876,6.07e-07,2 | |||
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| ||
|short_description=p13@RTN1 | |||
}} | }} |
Latest revision as of 19:50, 24 September 2015
Short description: | p13@RTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RTN1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 100bp_to_ENST00000490111_5end |
EntrezGene: | RTN1 |
HGNC: | 10467 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data