FFCP PHASE1:Hg19::chr15:81171136..81171166,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:81171136..81171166,- to FFCP PHASE1:Hg19::chr15:81171136..81171166,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:81171136..81171166,- | |||
|coexpression_cluster_id=C387 | |||
|description=CAGE_peak_at_chr15:81171136..81171166,- | |||
|id=chr15:81171136..81171166,- | |||
|ontology_enrichment_celltype=CL:0000057!2.79e-20!75;CL:0000055!1.35e-17!180;CL:0002620!1.47e-08!23;CL:0002334!3.26e-08!12;CL:0000499!5.65e-08!27;CL:0000136!2.45e-07!15;CL:1000306!5.86e-07!4;CL:0002547!5.86e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002334;8.82e-17;12!CL:0002579;5.69e-14;3!CL:0002580;7.19e-14;3!CL:0000135;4.16e-13;3!CL:0000388;4.16e-13;3!CL:1000306;1.15e-09;4!CL:0002547;1.15e-09;4!CL:0002617;1.50e-09;2!CL:0000057;3.13e-08;73!CL:0000136;4.78e-08;13!CL:0002620;2.15e-07;23!CL:0002615;8.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.11e-27,76;CL:0002334,7.86e-17,12;CL:0002579,5.58e-14,3;CL:0002580,6.62e-14,3;CL:0000135,3.12e-13,3;CL:0000388,3.12e-13,3;CL:1000306,1.41e-09,4;CL:0002547,1.41e-09,4;CL:0000136,1.59e-09,15;CL:0002617,1.67e-09,2;CL:0000134,1.59e-07,354;CL:0002620,1.78e-07,23;CL:0002320,3.18e-07,361;CL:0000048,3.77e-07,427;CL:0000723,6.28e-07,433;CL:0000219,8.74e-07,386;CL:0002615,9.24e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.92e-08!5;DOID:450!4.92e-08!5;DOID:66!4.92e-08!5;DOID:423!4.92e-08!5;DOID:0080000!4.92e-08!5;DOID:11722!4.92e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.39e-07;5!DOID:450;1.39e-07;5!DOID:66;1.39e-07;5!DOID:423;1.39e-07;5!DOID:0080000;1.39e-07;5!DOID:11722;1.39e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.13e-07,5;DOID:450,1.13e-07,5;DOID:66,1.13e-07,5;DOID:423,1.13e-07,5;DOID:0080000,1.13e-07,5;DOID:11722,1.13e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.06e-10!6;UBERON:0002358!1.06e-10!6;UBERON:0003684!1.06e-10!6;UBERON:0001178!1.06e-10!6;UBERON:0004457!1.67e-08!12;UBERON:0000042!1.67e-08!12;UBERON:0002097!6.31e-08!40;UBERON:0002199!2.28e-07!45;UBERON:0002416!2.28e-07!45;UBERON:0000415!5.86e-07!4;UBERON:0007240!5.86e-07!4;UBERON:0005742!5.86e-07!4;UBERON:0005734!5.86e-07!4;UBERON:0004664!5.86e-07!4;UBERON:0004663!5.86e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.78e-23;9!UBERON:0000042;5.78e-23;9!UBERON:0003688;2.75e-18;6!UBERON:0002358;2.75e-18;6!UBERON:0003684;2.75e-18;6!UBERON:0001178;2.75e-18;6!UBERON:0007846;4.16e-13;3!UBERON:0000043;4.16e-13;3!UBERON:0007845;4.16e-13;3!UBERON:0000310;1.12e-10;10!UBERON:0001443;1.13e-09;11!UBERON:0004797;1.15e-09;4!UBERON:0000415;1.15e-09;4!UBERON:0007240;1.15e-09;4!UBERON:0005742;1.15e-09;4!UBERON:0005734;1.15e-09;4!UBERON:0004664;1.15e-09;4!UBERON:0004663;1.15e-09;4!UBERON:0005406;5.09e-09;2!UBERON:0002384;6.80e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.80e-18,6;UBERON:0002358,2.80e-18,6;UBERON:0003684,2.80e-18,6;UBERON:0001178,2.80e-18,6;UBERON:0004457,5.50e-17,12;UBERON:0000042,5.50e-17,12;UBERON:0007846,3.12e-13,3;UBERON:0000043,3.12e-13,3;UBERON:0007845,3.12e-13,3;UBERON:0000310,1.13e-10,10;UBERON:0001443,1.14e-09,11;UBERON:0000415,1.41e-09,4;UBERON:0007240,1.41e-09,4;UBERON:0005742,1.41e-09,4;UBERON:0005734,1.41e-09,4;UBERON:0004664,1.41e-09,4;UBERON:0004663,1.41e-09,4;UBERON:0005406,4.51e-09,2;UBERON:0002097,8.67e-08,41;UBERON:0002384,1.69e-07,371;UBERON:0002199,9.51e-07,46;UBERON:0002416,9.51e-07,46 | |||
|phase1_expression=5.63202975738726,3.21150785836475,6.06103937612676,6.00439790118782,0.446961094427288,3.48935409640147,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04580098949649,0.722878304769133,0.50133791063589,1.01392563272577,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,0.379891534993739,2.25095607382472,3.72887606973458,1.06400514659507,4.48542080113846,0,0.74000264525148,0.311211035399766,0,0,0.302714855289863,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0.718618141816238,0,0,0,0,8.58165828237255,2.40380894250555,0,1.4351170855109,0.427114777637135,2.33125091275518,1.80054657650641,0.412210116953756,0.772921620136887,0.37223371266318,1.5189869901714,0.194874010322397,2.52433774244115,1.74894807420369,0.646584227275248,0,0,1.18692414617341,0,0,0,0,0,0,0,0,0,0,7.07565032012174,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.234282829985426,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0.783204629850962,0,0,0,0,0,0,0,7.93944985020086,7.21271274453894,5.89386198309454,12.429497477803,4.09365799253363,8.84696566289841,1.48418066444991,0,0,0,0,0.116210378459959,0,0,0,0.574072240823034,0.910455840033585,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0,2.232950216158,0,0.953150969619124,0,0.42793898803392,1.27281299170375,0.78494864019923,1.07923474549989,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0.974853958525138,0,0,0.424216295861138,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0,2.9555068941673,8.23237232399755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,3.60299883542404,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0,1.51230923763239,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,1.34699795506368,0,0,0,0.260994291965212,0.453411851024545,3.47283711485751,0,0.179088841081487,0.308801447160972,3.28926074368061,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54403480522735,0,0,1.41070377476274,0.918736432059601,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0.196308467114945,0,0.8453114551668,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,2.97596014533401,5.0839319149456,2.59575937274273,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=5.63202975738726,3.21150785836475,6.06103937612676,6.00439790118782,0.446961094427288,3.48935409640147,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04580098949649,0.722878304769133,0.50133791063589,1.01392563272577,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,0.379891534993739,2.25095607382472,3.72887606973458,1.06400514659507,4.48542080113846,0,0.74000264525148,0.311211035399766,0,0,0.302714855289863,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0.718618141816238,0,0,0,0,8.58165828237255,2.40380894250555,0,1.4351170855109,0.427114777637135,2.33125091275518,1.80054657650641,0.412210116953756,0.772921620136887,0.37223371266318,1.5189869901714,0.194874010322397,2.52433774244115,1.74894807420369,0.646584227275248,0,0,1.18692414617341,0,0,0,0,0,0,0,0,0,0,7.07565032012174,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.234282829985426,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0.783204629850962,0,0,0,0,0,0,0,7.93944985020086,7.21271274453894,5.89386198309454,12.429497477803,4.09365799253363,8.84696566289841,1.48418066444991,0,0,0,0,0.116210378459959,0,0,0,0.574072240823034,0.910455840033585,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0,2.232950216158,0,0.953150969619124,0,0.42793898803392,1.27281299170375,0.78494864019923,1.07923474549989,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0,0.974853958525138,0,0,0.424216295861138,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0,2.9555068941673,8.23237232399755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,3.60299883542404,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0,1.51230923763239,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,1.34699795506368,0,0,0,0.260994291965212,0.453411851024545,3.47283711485751,0,0.179088841081487,0.308801447160972,3.28926074368061,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54403480522735,0,0,1.41070377476274,0.918736432059601,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0.196308467114945,0,0.8453114551668,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,2.97596014533401,5.0839319149456,2.59575937274273,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr15:81171136..81171166,- | |||
}} | }} |
Latest revision as of 04:48, 25 July 2015
Short description: | p@chr15:81171136..81171166, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:81171136..81171166, - |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.11e-27 | 76 |
preadipocyte | 7.86e-17 | 12 |
omentum preadipocyte | 5.58e-14 | 3 |
preadipocyte of the breast | 6.62e-14 | 3 |
fibrocyte | 3.12e-13 | 3 |
tendon cell | 3.12e-13 | 3 |
fibroblast of tunica adventitia of artery | 1.41e-09 | 4 |
fibroblast of the aortic adventitia | 1.41e-09 | 4 |
fat cell | 1.59e-09 | 15 |
adipocyte of breast | 1.67e-09 | 2 |
mesenchymal cell | 1.59e-07 | 354 |
skin fibroblast | 1.78e-07 | 23 |
connective tissue cell | 3.18e-07 | 361 |
multi fate stem cell | 3.77e-07 | 427 |
somatic stem cell | 6.28e-07 | 433 |
motile cell | 8.74e-07 | 386 |
adipocyte of omentum tissue | 9.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.80e-18 | 6 |
peritoneum | 2.80e-18 | 6 |
abdominal cavity | 2.80e-18 | 6 |
visceral peritoneum | 2.80e-18 | 6 |
cavity lining | 5.50e-17 | 12 |
serous membrane | 5.50e-17 | 12 |
dense regular connective tissue | 3.12e-13 | 3 |
tendon | 3.12e-13 | 3 |
regular connective tissue | 3.12e-13 | 3 |
breast | 1.13e-10 | 10 |
chest | 1.14e-09 | 11 |
artery wall | 1.41e-09 | 4 |
tunica adventitia of artery | 1.41e-09 | 4 |
adventitia | 1.41e-09 | 4 |
tunica adventitia of blood vessel | 1.41e-09 | 4 |
aorta tunica adventitia | 1.41e-09 | 4 |
aorta wall | 1.41e-09 | 4 |
perirenal fat | 4.51e-09 | 2 |
skin of body | 8.67e-08 | 41 |
connective tissue | 1.69e-07 | 371 |
integument | 9.51e-07 | 46 |
integumental system | 9.51e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.13e-07 | 5 |
myotonic disease | 1.13e-07 | 5 |
muscle tissue disease | 1.13e-07 | 5 |
myopathy | 1.13e-07 | 5 |
muscular disease | 1.13e-07 | 5 |
myotonic dystrophy | 1.13e-07 | 5 |