FFCP PHASE1:Hg19::chr16:24740673..24740693,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:24740673..24740693,+ to FFCP PHASE1:Hg19::chr16:24740673..24740693,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27327 | |EntrezGene=27327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11969 | |HGNC=11969 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-322bp_to_ENST00000315183_5end | |||
|cluster_id=chr16:24740673..24740693,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_7_at_TNRC6A_5end | |||
|id=chr16:24740673..24740693,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.62e-12!18;CL:0000789!2.62e-12!18;CL:0002420!2.62e-12!18;CL:0002419!2.62e-12!18;CL:0000790!2.62e-12!18;CL:0000838!1.82e-11!52;CL:0000542!6.45e-11!53;CL:0000051!6.45e-11!53;CL:0000084!2.17e-10!25;CL:0000827!2.17e-10!25;CL:0000625!4.75e-09!11;CL:0000738!1.36e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.76e-38;18!CL:0000789;2.76e-38;18!CL:0002419;2.76e-38;18!CL:0000084;1.93e-30;25!CL:0000624;2.13e-23;6!CL:0000625;2.52e-20;11!CL:0000542;1.64e-15;53!CL:0000898;1.19e-12;3!CL:0000623;9.50e-12;3!CL:0000226;3.98e-11;3!CL:0000842;3.98e-11;3!CL:0000815;5.83e-09;2!CL:0000792;5.83e-09;2!CL:0002677;5.83e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.89e-38,18;CL:0000789,1.89e-38,18;CL:0002420,1.89e-38,18;CL:0002419,1.89e-38,18;CL:0000790,1.89e-38,18;CL:0000084,1.92e-30,25;CL:0000827,1.92e-30,25;CL:0000838,2.15e-26,52;CL:0000542,8.62e-26,53;CL:0000051,8.62e-26,53;CL:0000624,2.12e-23,6;CL:0000625,1.79e-20,11;CL:0002087,8.29e-15,115;CL:0000738,6.91e-14,136;CL:0000898,1.19e-12,3;CL:0000623,9.55e-12,3;CL:0000825,9.55e-12,3;CL:0000226,2.11e-11,3;CL:0000842,2.11e-11,3;CL:0000037,5.73e-11,168;CL:0002031,2.51e-10,120;CL:0000988,4.57e-10,177;CL:0000815,5.85e-09,2;CL:0000792,5.85e-09,2;CL:0002677,5.85e-09,2;CL:0002032,5.71e-08,161;CL:0000837,5.71e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.76e-38;18!CL:0000051;1.64e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.43e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0.975865597581014,0.123121058076788,0,0,0,0.136874425072884,0.502170558379211,0.0764134057479513,0.246301768349837,0.157421562627358,0,0.767658796194425,0.928896739896456,0.919421224478927,0,0,0.542270404062111,0.568676929949686,0.587200878669695,1.10799081706375,1.00272223735071,0.868043482863407,0.447830948479849,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0.211255286311942,0,0.419317291016752,0,0.150176892841506,0.16072558669708,0.570025487482497,0.59675003159727,0.730656615058536,0,0,0.889509253863555,0.426730222566507,0.400395987036012,1.14950487990897,0.661044872784862,0,3.41527781465669,0.587237189370939,4.20500550937752,1.32171328579026,0.560508562981536,0,9.44206896546399,4.71612915298998,3.49522548299166,1.17030546773475,5.86660079940463,5.20792586308207,3.89653456815823,1.22551502573691,4.41908861212256,1.77227115666897,2.97884250141517,0.896639238079726,1.43065282315866,0.657751618414705,0,1.15921234294021,3.85545064221357,4.81573490561484,4.18142095219907,1.24640276967323,8.43085085924227,2.06176467289578,1.77113784413652,0.95569624297229,3.25541726928209,0.950452044448374,1.95747654801105,2.17577238962511,1.24930726552346,0.947109008176067,4.92676798152628,3.42731463482045,2.40696176205157,3.91025890483557,0,0,0.383587685530591,0.361439152384566,0,0.289693037921647,0.795285947051099,0,0,0.221729397462564,0,0.458426764241994,0.364295288292542,0,0.324547393654683,0.870648686496336,0.132957960518865,0.953962497221368,0.571994910780128,1.48583000531826,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0,0.835979866147242,0.775250277507987,0.35576626268671,0.66944122552934,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.49333509683432,0.311211035399766,0.269421344139376,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0,0.408308342509787,0.122834317311768,0.413303124703062,0,0.494533858557114,0,0,0.336672227908132,0,0,0.438977620880838,0,0,0.113432183160021,0.358779271377724,0.427114777637135,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0.286804595389004,0.243947412259191,0.132529768321485,0.348581828608555,0.310983165046111,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0.118306800039844,0,0.482022059766964,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0,0.234004265139238,0,0,0,0.425325291727159,0,0,0,0,0.088048434013226,0.414656231081544,0.432359860250884,0.6312121671319,0,0.381988425558278,0,0,0,0,0,0,0,0.2933531432838,0,0,0,0.797814349754612,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0,2.56139988262505,2.58753089831421,2.05348858047597,0.254094624222463,0,0.773288812777695,0.335032530668698,0,1.49801404789436,0,0.828831026872071,0.12269149171914,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,2.68798433959754,1.2942852049117,1.70764092485511,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0.519254429183621,0,0.120859449591622,0,0.276242966807689,0,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0.66343897524122,0,0,0,0.202910376962704,0.6196469961995,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,0,1.62009431171434,2.37937552888281,0.213648142254946,0,0,0,0.28853842595289,0.213425530045242,0.318852545457645,0.798317485731266,0,0.211673582723883,0,0,0,0.313359791546046,2.50634477090067,0.169291777801603,0.1605880751037,0,0,0,0,0.223676107892416,0,0.19538809540204,0.556812347790485,0,0.270455678475983,0.33307196799782,0,0,0.146508179271894,0.121360521749513,0.111443384277478,0,0.71623345421307,1.18785872333055,0,0,0.422008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| ||
|short_description=p7@TNRC6A | |||
}} | }} |
Latest revision as of 18:28, 15 September 2015
Short description: | p7@TNRC6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNRC6A_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -322bp_to_ENST00000315183_5end |
EntrezGene: | TNRC6A |
HGNC: | 11969 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.89e-38 | 18 |
alpha-beta T cell | 1.89e-38 | 18 |
immature T cell | 1.89e-38 | 18 |
mature T cell | 1.89e-38 | 18 |
immature alpha-beta T cell | 1.89e-38 | 18 |
T cell | 1.92e-30 | 25 |
pro-T cell | 1.92e-30 | 25 |
lymphoid lineage restricted progenitor cell | 2.15e-26 | 52 |
lymphocyte | 8.62e-26 | 53 |
common lymphoid progenitor | 8.62e-26 | 53 |
CD4-positive, alpha-beta T cell | 2.12e-23 | 6 |
CD8-positive, alpha-beta T cell | 1.79e-20 | 11 |
nongranular leukocyte | 8.29e-15 | 115 |
leukocyte | 6.91e-14 | 136 |
naive T cell | 1.19e-12 | 3 |
natural killer cell | 9.55e-12 | 3 |
pro-NK cell | 9.55e-12 | 3 |
single nucleate cell | 2.11e-11 | 3 |
mononuclear cell | 2.11e-11 | 3 |
hematopoietic stem cell | 5.73e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 2.51e-10 | 120 |
hematopoietic cell | 4.57e-10 | 177 |
regulatory T cell | 5.85e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.85e-09 | 2 |
naive regulatory T cell | 5.85e-09 | 2 |
hematopoietic oligopotent progenitor cell | 5.71e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.71e-08 | 161 |