FFCP PHASE1:Hg19::chr16:50655573..50655586,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:50655573..50655586,- | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_at_chr16:50655573..50655586,- | |||
|id=chr16:50655573..50655586,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.03e-29;12!CL:0002581;4.59e-23;1!CL:0000322;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.18e-30,12;CL:0002581,5.13e-23,1;CL:0000223,1.08e-09,58;CL:0000322,1.30e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.32e-32;11!UBERON:0009497;1.78e-27;13!UBERON:0001041;2.17e-26;30!UBERON:0003104;1.07e-11;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1325;1.44e-13;7!DOID:3904;1.44e-13;7!DOID:3910;3.06e-12;2!DOID:3905;9.01e-11;9!DOID:7;6.84e-09;39!DOID:5409;7.27e-07;4!DOID:1324;7.98e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,1.40e-13,7;DOID:3904,1.40e-13,7;DOID:3910,2.90e-12,2;DOID:3905,8.79e-11,9;DOID:305,4.15e-10,106;DOID:7,1.78e-09,39;DOID:0050687,1.95e-07,143;DOID:5409,7.27e-07,4;DOID:1324,7.86e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.00e-14!115;UBERON:0001049!4.13e-12!57;UBERON:0005068!4.13e-12!57;UBERON:0006241!4.13e-12!57;UBERON:0007135!4.13e-12!57;UBERON:0001017!3.72e-10!82;UBERON:0005743!1.81e-09!86;UBERON:0000073!4.20e-09!94;UBERON:0001016!4.20e-09!94;UBERON:0002616!1.02e-08!59;UBERON:0001893!6.12e-08!34;UBERON:0001950!7.05e-08!20;UBERON:0000955!7.59e-08!69;UBERON:0006238!7.59e-08!69;UBERON:0002780!1.40e-07!41;UBERON:0001890!1.40e-07!41;UBERON:0006240!1.40e-07!41;UBERON:0003075!1.43e-07!86;UBERON:0007284!1.43e-07!86;UBERON:0003080!2.40e-07!42;UBERON:0002619!4.46e-07!22;UBERON:0002346!4.70e-07!90;UBERON:0003127!6.40e-07!2;UBERON:0002791!7.84e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.67e-19;19!UBERON:0006925;5.67e-19;19!UBERON:0002423;1.56e-14;25!UBERON:0004903;3.06e-12;2!UBERON:0005406;3.06e-12;2!UBERON:0002173;3.06e-12;2!UBERON:0002186;3.06e-12;2!UBERON:0002365;3.35e-11;31!UBERON:0002330;3.35e-11;31!UBERON:0002368;3.21e-10;33!UBERON:0004821;1.35e-08;3!UBERON:0007499;1.35e-08;3!UBERON:0003215;1.35e-08;3!UBERON:0010368;1.35e-08;3!UBERON:0009911;1.35e-08;3!UBERON:0002299;1.35e-08;3!UBERON:0006524;1.35e-08;3!UBERON:0008874;1.35e-08;3!UBERON:0002169;1.35e-08;3!UBERON:0004894;1.35e-08;3!UBERON:0000949;7.61e-08;43!UBERON:0009856;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,3.40e-22,25;UBERON:0009856,2.36e-21,26;UBERON:0002107,5.29e-19,19;UBERON:0006925,5.29e-19,19;UBERON:0008836,5.29e-19,19;UBERON:0008835,1.77e-16,22;UBERON:0003894,1.77e-16,22;UBERON:0009854,8.78e-16,23;UBERON:0009497,1.48e-14,25;UBERON:0000015,1.48e-14,25;UBERON:0002423,1.48e-14,25;UBERON:0006235,1.48e-14,25;UBERON:0004161,1.48e-14,25;UBERON:0004903,2.90e-12,2;UBERON:0002173,2.90e-12,2;UBERON:0002186,2.90e-12,2;UBERON:0005406,3.24e-12,2;UBERON:0002365,8.01e-12,31;UBERON:0002330,8.01e-12,31;UBERON:0002368,1.62e-10,35;UBERON:0005911,1.06e-09,82;UBERON:0001041,3.84e-09,87;UBERON:0004821,1.30e-08,3;UBERON:0003215,1.30e-08,3;UBERON:0010368,1.30e-08,3;UBERON:0009911,1.30e-08,3;UBERON:0002299,1.30e-08,3;UBERON:0006524,1.30e-08,3;UBERON:0008874,1.30e-08,3;UBERON:0002169,1.30e-08,3;UBERON:0004894,1.30e-08,3;UBERON:0000949,2.94e-08,45;UBERON:0005177,7.28e-08,101;UBERON:0009569,4.42e-07,112;UBERON:0003929,6.21e-07,54;UBERON:0005172,6.21e-07,54;UBERON:0005173,6.21e-07,54 | |||
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| ||
|short_description=p@chr16:50655573..50655586,- | |||
}} | }} |
Latest revision as of 09:32, 25 July 2015
Short description: | p@chr16:50655573..50655586, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50655573..50655586, - |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.18e-30 | 12 |
perirenal preadipocyte | 5.13e-23 | 1 |
endodermal cell | 1.08e-09 | 58 |
pneumocyte | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial sac | 3.40e-22 | 25 |
sac | 2.36e-21 | 26 |
liver | 5.29e-19 | 19 |
digestive gland | 5.29e-19 | 19 |
liver bud | 5.29e-19 | 19 |
hepatic diverticulum | 1.77e-16 | 22 |
liver primordium | 1.77e-16 | 22 |
digestive tract diverticulum | 8.78e-16 | 23 |
epithelium of foregut-midgut junction | 1.48e-14 | 25 |
anatomical boundary | 1.48e-14 | 25 |
hepatobiliary system | 1.48e-14 | 25 |
foregut-midgut junction | 1.48e-14 | 25 |
septum transversum | 1.48e-14 | 25 |
bronchoalveolar duct junction | 2.90e-12 | 2 |
alveolar duct | 2.90e-12 | 2 |
bronchiole | 2.90e-12 | 2 |
perirenal fat | 3.24e-12 | 2 |
exocrine gland | 8.01e-12 | 31 |
exocrine system | 8.01e-12 | 31 |
endocrine gland | 1.62e-10 | 35 |
endo-epithelium | 1.06e-09 | 82 |
foregut | 3.84e-09 | 87 |
pulmonary alveolus epithelium | 1.30e-08 | 3 |
alveolus | 1.30e-08 | 3 |
pulmonary lobule | 1.30e-08 | 3 |
lobule | 1.30e-08 | 3 |
alveolus of lung | 1.30e-08 | 3 |
alveolar system | 1.30e-08 | 3 |
pulmonary acinus | 1.30e-08 | 3 |
alveolar sac | 1.30e-08 | 3 |
alveolar wall | 1.30e-08 | 3 |
endocrine system | 2.94e-08 | 45 |
trunk region element | 7.28e-08 | 101 |
subdivision of trunk | 4.42e-07 | 112 |
gut epithelium | 6.21e-07 | 54 |
abdomen element | 6.21e-07 | 54 |
abdominal segment element | 6.21e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.40e-13 | 7 |
bronchogenic carcinoma | 1.40e-13 | 7 |
lung adenocarcinoma | 2.90e-12 | 2 |
lung carcinoma | 8.79e-11 | 9 |
carcinoma | 4.15e-10 | 106 |
disease of anatomical entity | 1.78e-09 | 39 |
cell type cancer | 1.95e-07 | 143 |
lung small cell carcinoma | 7.27e-07 | 4 |
lung cancer | 7.86e-07 | 15 |