FFCP PHASE1:Hg19::chr16:57309513..57309516,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:57309513..57309516,- to FFCP PHASE1:Hg19::chr16:57309513..57309516,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:57309513..57309516,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_at_chr16:57309513..57309516,- | |||
|id=chr16:57309513..57309516,- | |||
|ontology_enrichment_celltype=CL:0002150!3.00e-08!3;CL:0000861!3.00e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.77e-37!57;UBERON:0005068!2.77e-37!57;UBERON:0006241!2.77e-37!57;UBERON:0007135!2.77e-37!57;UBERON:0007023!4.38e-36!115;UBERON:0002780!1.48e-28!41;UBERON:0001890!1.48e-28!41;UBERON:0006240!1.48e-28!41;UBERON:0002616!3.02e-28!59;UBERON:0003080!9.80e-28!42;UBERON:0001017!9.75e-27!82;UBERON:0000955!1.13e-26!69;UBERON:0006238!1.13e-26!69;UBERON:0001893!6.38e-26!34;UBERON:0002020!8.03e-26!34;UBERON:0003528!8.03e-26!34;UBERON:0005743!4.30e-25!86;UBERON:0002791!6.28e-24!33;UBERON:0003075!1.50e-23!86;UBERON:0007284!1.50e-23!86;UBERON:0002346!4.07e-22!90;UBERON:0000073!6.74e-22!94;UBERON:0001016!6.74e-22!94;UBERON:0001869!8.21e-22!32;UBERON:0002308!6.50e-19!9;UBERON:0000125!6.50e-19!9;UBERON:0003056!3.12e-17!61;UBERON:0002420!1.55e-14!9;UBERON:0007245!1.55e-14!9;UBERON:0010009!1.55e-14!9;UBERON:0010011!1.55e-14!9;UBERON:0000454!1.55e-14!9;UBERON:0002619!5.24e-14!22;UBERON:0009663!5.75e-14!7;UBERON:0000153!7.42e-14!129;UBERON:0007811!7.42e-14!129;UBERON:0000033!8.82e-14!123;UBERON:0001950!6.08e-13!20;UBERON:0000956!4.59e-12!25;UBERON:0000203!4.59e-12!25;UBERON:0002298!4.94e-12!8;UBERON:0000200!5.66e-11!6;UBERON:0000025!1.33e-10!194;UBERON:0003076!1.66e-10!15;UBERON:0003057!1.66e-10!15;UBERON:0004121!3.70e-10!169;UBERON:0004111!5.17e-10!241;UBERON:0000924!9.92e-10!173;UBERON:0006601!9.92e-10!173;UBERON:0006331!1.69e-09!3;UBERON:0000477!3.39e-09!286;UBERON:0002240!3.46e-09!3;UBERON:0000988!4.41e-09!3;UBERON:0002771!2.26e-08!3;UBERON:0001871!2.94e-08!7;UBERON:0001897!4.62e-07!2;UBERON:0001875!5.64e-07!2;UBERON:0006514!5.64e-07!2;UBERON:0002148!9.86e-07!2;UBERON:0009662!9.86e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;2.39e-66;1!UBERON:0009661;2.39e-66;1!UBERON:0002950;2.39e-66;1!UBERON:0001891;2.39e-66;1!UBERON:0009663;1.80e-38;7!UBERON:0001897;5.04e-34;2!UBERON:0001875;5.04e-34;2!UBERON:0006514;5.04e-34;2!UBERON:0010225;5.04e-34;2!UBERON:0002420;3.09e-30;9!UBERON:0000125;3.09e-30;9!UBERON:0007245;3.09e-30;9!UBERON:0002308;3.09e-30;9!UBERON:0010009;3.09e-30;9!UBERON:0010011;3.09e-30;9!UBERON:0000454;3.09e-30;9!UBERON:0002784;8.69e-18;4!UBERON:0002780;1.28e-13;41!UBERON:0001890;1.28e-13;41!UBERON:0000073;3.12e-11;53!UBERON:0002616;3.12e-11;53!UBERON:0001894;8.99e-11;7!UBERON:0002791;5.60e-08;32!UBERON:0001016;4.15e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.23e-66,1;UBERON:0009661,1.23e-66,1;UBERON:0002950,1.23e-66,1;UBERON:0001891,1.23e-66,1;UBERON:0009616,1.23e-66,1;UBERON:0010286,1.23e-66,1;UBERON:0009663,1.80e-38,7;UBERON:0001897,5.04e-34,2;UBERON:0010225,5.04e-34,2;UBERON:0001875,7.05e-34,2;UBERON:0006514,7.05e-34,2;UBERON:0002420,3.09e-30,9;UBERON:0000125,3.09e-30,9;UBERON:0007245,3.09e-30,9;UBERON:0002308,3.09e-30,9;UBERON:0010009,3.09e-30,9;UBERON:0010011,3.09e-30,9;UBERON:0000454,3.09e-30,9;UBERON:0002784,8.69e-18,4;UBERON:0002780,3.52e-15,41;UBERON:0001890,3.52e-15,41;UBERON:0003080,3.52e-15,41;UBERON:0006240,3.52e-15,41;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0001894,8.99e-11,7;UBERON:0006222,8.99e-11,7;UBERON:0003056,1.22e-10,61;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002791,3.95e-09,32;UBERON:0003528,1.14e-08,34;UBERON:0002020,1.14e-08,34;UBERON:0001893,1.14e-08,34;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0.611030144933625,0,0.123563938946503,0,0.943615861729479,0,0.468528891450678,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483781656445426,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.316553979779393,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,1.09524303113594,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0,0.13480708770837,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.387848869084652,0.66116300871345,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.263091094251396,0.118193840883968,0,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.392616934229891,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,1.86341458096887,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0,0,0.829169439458779,1.34462894620464,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0.611030144933625,0,0.123563938946503,0,0.943615861729479,0,0.468528891450678,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483781656445426,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.316553979779393,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,1.09524303113594,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0,0.13480708770837,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.387848869084652,0.66116300871345,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.263091094251396,0.118193840883968,0,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.392616934229891,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,1.86341458096887,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0,0,0.829169439458779,1.34462894620464,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr16:57309513..57309516,- | |||
}} | }} |
Latest revision as of 10:30, 25 July 2015
Short description: | p@chr16:57309513..57309516, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57309513..57309516, - |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data