FFCP PHASE1:Hg19::chr19:12945329..12945340,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:12945329..12945340,- to FFCP PHASE1:Hg19::chr19:12945329..12945340,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83546 | |EntrezGene=83546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30310 | |HGNC=30310 | ||
|TSSclassifier=strong | |||
|UniProt=F1T0I8 | |UniProt=F1T0I8 | ||
|association_with_transcript=49bp_to_AB593122_5end | |||
|cluster_id=chr19:12945329..12945340,- | |||
|coexpression_cluster_id=C1706 | |||
|description=CAGE_peak_5_at_RTBDN_5end | |||
|id=chr19:12945329..12945340,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.30e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!2.15e-55!22;UBERON:0002780!1.27e-50!41;UBERON:0001890!1.27e-50!41;UBERON:0006240!1.27e-50!41;UBERON:0000955!2.00e-49!69;UBERON:0006238!2.00e-49!69;UBERON:0003080!2.73e-49!42;UBERON:0001950!7.02e-49!20;UBERON:0000956!2.02e-48!25;UBERON:0000203!2.02e-48!25;UBERON:0001893!4.09e-47!34;UBERON:0005743!3.00e-46!86;UBERON:0001017!4.48e-46!82;UBERON:0001869!5.72e-46!32;UBERON:0001049!5.37e-44!57;UBERON:0005068!5.37e-44!57;UBERON:0006241!5.37e-44!57;UBERON:0007135!5.37e-44!57;UBERON:0002791!5.45e-44!33;UBERON:0002616!2.77e-42!59;UBERON:0000073!3.99e-41!94;UBERON:0001016!3.99e-41!94;UBERON:0002020!1.08e-38!34;UBERON:0003528!1.08e-38!34;UBERON:0003075!1.25e-38!86;UBERON:0007284!1.25e-38!86;UBERON:0003056!8.53e-38!61;UBERON:0002346!1.46e-36!90;UBERON:0007023!1.97e-31!115;UBERON:0000153!4.22e-30!129;UBERON:0007811!4.22e-30!129;UBERON:0000033!4.09e-28!123;UBERON:0000200!1.08e-22!6;UBERON:0004121!4.36e-22!169;UBERON:0000924!2.24e-21!173;UBERON:0006601!2.24e-21!173;UBERON:0000349!5.94e-19!5;UBERON:0001871!9.40e-17!7;UBERON:0002021!1.73e-12!5;UBERON:0001872!2.25e-12!5;UBERON:0002771!9.75e-12!3;UBERON:0000483!3.25e-11!309;UBERON:0000119!5.14e-11!312;UBERON:0000475!3.03e-10!365;UBERON:0000064!3.23e-10!219;UBERON:0000025!7.44e-10!194;UBERON:0003296!1.56e-09!4;UBERON:0010133!1.56e-09!4;UBERON:0001870!4.42e-09!2;UBERON:0001905!6.02e-09!2;UBERON:0002757!6.02e-09!2;UBERON:0010134!6.02e-09!2;UBERON:0002784!6.02e-09!2;UBERON:0005408!6.02e-09!2;UBERON:0001899!6.02e-09!2;UBERON:0001876!7.29e-09!2;UBERON:0000477!7.49e-09!286;UBERON:0001954!2.81e-08!2;UBERON:0003022!2.81e-08!2;UBERON:0002421!2.81e-08!2;UBERON:0002600!2.81e-08!2;UBERON:0002360!3.37e-08!2;UBERON:0000094!3.37e-08!2;UBERON:0007645!3.37e-08!2;UBERON:0004111!5.92e-08!241;UBERON:0000481!1.33e-07!347;UBERON:0000062!3.89e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.50e-62;20!UBERON:0002619;1.73e-56;22!UBERON:0000956;7.98e-50;25!UBERON:0000203;7.98e-50;25!UBERON:0001869;1.18e-49;32!UBERON:0001893;2.59e-47;34!UBERON:0002780;2.97e-43;41!UBERON:0001890;2.97e-43;41!UBERON:0002791;3.00e-43;32!UBERON:0003528;1.26e-38;34!UBERON:0002020;1.26e-38;34!UBERON:0000200;1.20e-29;6!UBERON:0000073;6.06e-28;53!UBERON:0002616;6.06e-28;53!UBERON:0003296;1.30e-25;4!UBERON:0010133;1.30e-25;4!UBERON:0001905;2.10e-23;2!UBERON:0002757;2.10e-23;2!UBERON:0010134;2.10e-23;2!UBERON:0005408;2.10e-23;2!UBERON:0001899;2.10e-23;2!UBERON:0002021;2.68e-20;5!UBERON:0000955;8.06e-20;68!UBERON:0001870;7.53e-16;3!UBERON:0001871;4.92e-15;6!UBERON:0001894;6.39e-15;7!UBERON:0001017;1.66e-14;75!UBERON:0002022;9.91e-13;1!UBERON:0003112;9.91e-13;1!UBERON:0011158;9.91e-13;1!UBERON:0003128;9.91e-13;1!UBERON:0001703;9.91e-13;1!UBERON:0002241;9.91e-13;1!UBERON:0002581;2.60e-12;1!UBERON:0002902;2.60e-12;1!UBERON:0001882;2.60e-12;1!UBERON:0009899;2.60e-12;1!UBERON:0007190;2.60e-12;1!UBERON:0005403;2.60e-12;1!UBERON:0002784;3.36e-12;4!UBERON:0001016;3.54e-11;83!UBERON:0000349;6.95e-10;5!UBERON:0001872;1.01e-09;5!UBERON:0007023;1.14e-09;114!UBERON:0001876;5.41e-07;2!UBERON:0002702;5.41e-07;2!UBERON:0002771;8.76e-07;2!UBERON:0000007;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,4.54e-65,41;UBERON:0001890,4.54e-65,41;UBERON:0003080,4.54e-65,41;UBERON:0006240,4.54e-65,41;UBERON:0001950,4.78e-62,20;UBERON:0002619,1.52e-56,22;UBERON:0001869,1.22e-54,32;UBERON:0001893,1.99e-51,34;UBERON:0000073,3.34e-50,53;UBERON:0002616,3.34e-50,53;UBERON:0000956,7.13e-50,25;UBERON:0000203,7.13e-50,25;UBERON:0001049,1.84e-47,56;UBERON:0005068,1.84e-47,56;UBERON:0006241,1.84e-47,56;UBERON:0007135,1.84e-47,56;UBERON:0002791,2.03e-46,32;UBERON:0003528,1.11e-43,34;UBERON:0002020,1.11e-43,34;UBERON:0003056,1.75e-43,61;UBERON:0000955,2.70e-38,68;UBERON:0006238,2.70e-38,68;UBERON:0001017,5.43e-32,81;UBERON:0003075,5.43e-32,82;UBERON:0007284,5.43e-32,82;UBERON:0002346,1.98e-30,86;UBERON:0000200,8.59e-30,6;UBERON:0001016,1.14e-28,89;UBERON:0007023,6.36e-26,114;UBERON:0003296,1.54e-25,4;UBERON:0010133,1.54e-25,4;UBERON:0010371,7.20e-25,104;UBERON:0001905,3.91e-23,2;UBERON:0002757,3.91e-23,2;UBERON:0010134,3.91e-23,2;UBERON:0005408,3.91e-23,2;UBERON:0001899,3.91e-23,2;UBERON:0010314,6.39e-22,132;UBERON:0002021,2.43e-20,5;UBERON:0001870,4.99e-16,3;UBERON:0001871,5.55e-15,6;UBERON:0001894,7.03e-15,7;UBERON:0006222,7.03e-15,7;UBERON:0004121,3.60e-14,171;UBERON:0000924,3.60e-14,171;UBERON:0006601,3.60e-14,171;UBERON:0002022,1.11e-12,1;UBERON:0003112,1.25e-12,1;UBERON:0011158,1.25e-12,1;UBERON:0003128,1.25e-12,1;UBERON:0001703,1.25e-12,1;UBERON:0002241,1.25e-12,1;UBERON:0004761,1.25e-12,1;UBERON:0009617,1.25e-12,1;UBERON:0007190,1.40e-12,1;UBERON:0000025,1.47e-12,192;UBERON:0002581,1.96e-12,1;UBERON:0002902,2.20e-12,1;UBERON:0009899,2.20e-12,1;UBERON:0001882,3.45e-12,1;UBERON:0005403,3.45e-12,1;UBERON:0002784,4.57e-12,4;UBERON:0011216,6.25e-12,223;UBERON:0000349,7.11e-10,5;UBERON:0001872,1.06e-09,5;UBERON:0004111,1.31e-09,240;UBERON:0001876,4.83e-07,2;UBERON:0000483,4.85e-07,306;UBERON:0002702,5.11e-07,2;UBERON:0000119,5.99e-07,309;UBERON:0005253,6.07e-07,2;UBERON:0000007,7.20e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,2.98244294329889,0.703347082052564,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83601308272048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,2.49073182297901,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.09823638411767,0.3755727921195,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,1.41696576325585,0.159633859057151,1.43581454968528,0,1.52145955421279,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89105236931505,0.781078098613847,0.206686796501184,1.14148458349032,0,0,0,0,0,4.82131652290458,1.00885116665647,1.82089681270989,0,0,0.115233987555779,0,0.271878931907327,1.64431933907123,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0.47404083519818,1.16241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0.109940516745429,0.301925687133347,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58367662725476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387533459016037,0.124149428591716,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,2.98244294329889,0.703347082052564,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83601308272048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,2.49073182297901,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.09823638411767,0.3755727921195,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,1.41696576325585,0.159633859057151,1.43581454968528,0,1.52145955421279,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89105236931505,0.781078098613847,0.206686796501184,1.14148458349032,0,0,0,0,0,4.82131652290458,1.00885116665647,1.82089681270989,0,0,0.115233987555779,0,0.271878931907327,1.64431933907123,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0.47404083519818,1.16241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0.109940516745429,0.301925687133347,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58367662725476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387533459016037,0.124149428591716,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@RTBDN | |||
}} | }} |
Latest revision as of 21:34, 15 September 2015
Short description: | p5@RTBDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RTBDN_5end |
Coexpression cluster: | C1706_pineal_occipital_paracentral_postcentral_alveolar_parietal_medial |
Association with transcript: | 49bp_to_AB593122_5end |
EntrezGene: | RTBDN |
HGNC: | 30310 |
UniProt: | F1T0I8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data