FFCP PHASE1:Hg19::chr19:6109109..6109132,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:6109109..6109132,+ | |||
|description=CAGE_peak_at_chr19:6109109..6109132,+ | |||
|id=chr19:6109109..6109132,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.41e-18;5!CL:0000163;1.93e-10;9!CL:0002540;2.49e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.21e-18,5;CL:0002028,2.21e-18,5;CL:0000163,1.84e-10,9;CL:0002540,2.53e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.71e-14;3!UBERON:0006242;9.96e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.75e-17!115;UBERON:0001049!1.88e-10!57;UBERON:0005068!1.88e-10!57;UBERON:0006241!1.88e-10!57;UBERON:0007135!1.88e-10!57;UBERON:0002780!5.52e-09!41;UBERON:0001890!5.52e-09!41;UBERON:0006240!5.52e-09!41;UBERON:0002616!8.48e-09!59;UBERON:0003080!1.23e-08!42;UBERON:0001893!2.81e-08!34;UBERON:0002791!9.84e-08!33;UBERON:0002020!2.03e-07!34;UBERON:0003528!2.03e-07!34;UBERON:0003075!3.59e-07!86;UBERON:0007284!3.59e-07!86;UBERON:0001869!9.31e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;4.35e-11;1!UBERON:0005208;4.35e-11;1!UBERON:0004145;4.35e-11;1!UBERON:0005946;4.35e-11;1!UBERON:0005965;4.35e-11;1!UBERON:0002078;4.35e-11;1!UBERON:0004733;8.58e-08;12!UBERON:0002028;8.58e-08;12!UBERON:0002037;2.49e-07;6!UBERON:0004732;3.14e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,4.15e-11,1;UBERON:0005208,4.15e-11,1;UBERON:0005946,4.15e-11,1;UBERON:0005965,4.15e-11,1;UBERON:0002078,4.15e-11,1;UBERON:0003076,1.50e-10,15;UBERON:0003057,1.50e-10,15;UBERON:0004733,8.00e-08,12;UBERON:0002028,8.00e-08,12;UBERON:0007277,8.00e-08,12;UBERON:0002037,2.23e-07,6;UBERON:0006215,2.23e-07,6;UBERON:0004732,2.95e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,1.23852898652861,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.941211697713023,0,0.224723484445085,0,0,0,0,0,0.852449501065388,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.393419540227666,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0.211931901159562,1.20036438433761,0.103052529238439,0.257640540045629,0,0.506328996723799,0,0.504867548488229,0,0,1.42003837006646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90259361757081,4.03535869567492,5.80715193761348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0,0,0,0,0.394061520403854,0.646882724578552,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.987884678879706,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0.280797178113459,0,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,1.39473591775749,0.552567831062295,0,0,0,0.311039587661807,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,1.52581736317083,3.20679853800551,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.687481272035051,2.15361907373044,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0.899895566206002,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.79339561045614,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0.1251909307065,0,2.10765197920019,0.496771223531068,0,0,0,0,0,0,0.144921028610825,0.298509605773748,0.467426619694449,1.10961172300523,0.568209015825267,1.25783950876288,3.55924488638614,0.228840068396924,1.81477108515887,0,0.295710299979268,0,0,0.155262956876259,0,0,0,0.901545653983311,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.19024743058172,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,2.0793248022896,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0,0.253397002022874,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.517164979309476,0,0.23806443146374,0.0645889098360061,0,0.112131862580613,0,0.404234377916439,0.435433495793923,0,0,0.0717222053926763,0,0,0,0,0,0,0.733448665097199,0,0,0.201273793591026,0 | 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| ||
|short_description=p@chr19:6109109..6109132,+ | |||
}} | }} |
Latest revision as of 18:02, 27 July 2015
Short description: | p@chr19:6109109..6109132, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6109109..6109132, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.21e-18 | 5 |
basophil mast progenitor cell | 2.21e-18 | 5 |
endocrine cell | 1.84e-10 | 9 |
mesenchymal stem cell of the bone marrow | 2.53e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 4.15e-11 | 1 |
right atrium valve | 4.15e-11 | 1 |
outflow tract of atrium | 4.15e-11 | 1 |
outflow part of right atrium | 4.15e-11 | 1 |
right cardiac atrium | 4.15e-11 | 1 |
posterior neural tube | 1.50e-10 | 15 |
chordal neural plate | 1.50e-10 | 15 |
segmental subdivision of hindbrain | 8.00e-08 | 12 |
hindbrain | 8.00e-08 | 12 |
presumptive hindbrain | 8.00e-08 | 12 |
cerebellum | 2.23e-07 | 6 |
rhombic lip | 2.23e-07 | 6 |
segmental subdivision of nervous system | 2.95e-07 | 13 |