FFCP PHASE1:Hg19::chr1:155179012..155179053,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:155179012..155179053,+ to FFCP PHASE1:Hg19::chr1:155179012..155179053,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4580 | |EntrezGene=4580 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7504 | |HGNC=7504 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000424959,ENST00000481771_5end | |||
|cluster_id=chr1:155179012..155179053,+ | |||
|coexpression_cluster_id=C534 | |||
|description=CAGE_peak_1_at_MTX1_5end | |||
|id=chr1:155179012..155179053,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.21e-42!679;CL:0000004!4.21e-42!679;CL:0000255!4.21e-42!679;CL:0000012!5.11e-42!682;CL:0000220!1.23e-31!246;CL:0002321!1.74e-31!248;CL:0000066!2.05e-31!254;CL:0000003!9.29e-27!722;CL:0000144!1.79e-25!625;CL:0000222!4.95e-20!119;CL:0002371!2.75e-17!591;CL:0000183!1.16e-14!59;CL:0000055!7.40e-13!180;CL:0000393!1.53e-12!60;CL:0000211!1.53e-12!60;CL:0000187!1.63e-12!54;CL:0000063!2.39e-12!578;CL:0000680!1.29e-11!57;CL:0000056!1.29e-11!57;CL:0000355!1.29e-11!57;CL:0000192!6.99e-10!42;CL:0000514!6.99e-10!42;CL:0000213!2.15e-08!57;CL:0000215!2.15e-08!57;CL:1000449!5.51e-08!16;CL:1000497!1.27e-07!18;CL:0002518!1.27e-07!18;CL:0000359!2.04e-07!32;CL:0000076!3.53e-07!62;CL:0000221!5.64e-07!71;CL:0002681!5.74e-07!13;CL:0002584!5.74e-07!13;CL:0002078!9.65e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:1000449;9.41e-09;15!CL:1000497;2.57e-08;17!CL:0002518;2.57e-08;17!CL:0002681;9.56e-08;12!CL:0002584;9.56e-08;12!CL:0000187;9.63e-08;55!CL:0000359;4.97e-07;32!CL:0000192;9.33e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.11e-31,253;CL:0002321,1.12e-31,250;CL:0000222,4.03e-20,121;CL:0000393,3.63e-12,61;CL:0000211,3.63e-12,61;CL:0000187,4.12e-12,55;CL:0000680,2.99e-11,58;CL:0000056,2.99e-11,58;CL:0000355,2.99e-11,58;CL:0000192,1.74e-09,43;CL:0000514,1.74e-09,43;CL:0000213,9.29e-09,58;CL:0000215,9.29e-09,58;CL:1000449,9.79e-09,15;CL:1000497,2.83e-08,17;CL:0002518,2.83e-08,17;CL:0002681,9.35e-08,12;CL:0002584,9.35e-08,12;CL:0000359,2.04e-07,32;CL:0000076,2.36e-07,63;CL:0000221,3.82e-07,72;CL:0002078,4.22e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000355;5.91e-07;58!CL:0000514;9.33e-07;43 | |||
|ontology_enrichment_disease=DOID:0050687!4.79e-10!143;DOID:162!1.97e-09!235;DOID:14566!3.39e-09!239;DOID:305!3.40e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.79e-10,143;DOID:162,1.97e-09,235;DOID:14566,3.39e-09,239;DOID:305,3.40e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!3.33e-15!238;UBERON:0009142!3.33e-15!238;UBERON:0005256!7.38e-15!143;UBERON:0002100!1.17e-14!216;UBERON:0000490!9.19e-14!138;UBERON:0003914!6.80e-12!118;UBERON:0000486!8.48e-12!82;UBERON:0000914!1.16e-10!83;UBERON:0002329!1.16e-10!83;UBERON:0003077!1.16e-10!83;UBERON:0003059!1.16e-10!83;UBERON:0007282!1.16e-10!83;UBERON:0009618!1.16e-10!83;UBERON:0007285!1.16e-10!83;UBERON:0004290!1.33e-10!70;UBERON:0001134!5.48e-09!61;UBERON:0002036!5.48e-09!61;UBERON:0003082!5.48e-09!61;UBERON:0002385!5.49e-08!63;UBERON:0001015!5.49e-08!63;UBERON:0000383!5.49e-08!63;UBERON:0004211!5.51e-08!16;UBERON:0001285!5.51e-08!16;UBERON:0007684!5.51e-08!16;UBERON:0003220!5.51e-08!16;UBERON:0004208!5.51e-08!16;UBERON:0002049!7.14e-08!79;UBERON:0007798!7.14e-08!79;UBERON:0001048!9.72e-08!168;UBERON:0009569!1.22e-07!113;UBERON:0001851!4.86e-07!16;UBERON:0006555!5.63e-07!17;UBERON:0005103!5.63e-07!17;UBERON:0000083!5.63e-07!17;UBERON:0009201!5.63e-07!17;UBERON:0004819!5.63e-07!17;UBERON:0006553!5.63e-07!17;UBERON:0003074!5.63e-07!17;UBERON:0003060!5.63e-07!17;UBERON:0001225!5.74e-07!13;UBERON:0008987!5.74e-07!13;UBERON:0000055!7.36e-07!69;UBERON:0001737!9.23e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.41e-09;15!UBERON:0004819;9.41e-09;15!UBERON:0001285;9.41e-09;15!UBERON:0007684;9.41e-09;15!UBERON:0001225;9.56e-08;12!UBERON:0008987;9.56e-08;12!UBERON:0001851;1.10e-07;15!UBERON:0006554;1.16e-07;30!UBERON:0001008;1.16e-07;30!UBERON:0002113;1.39e-07;24!UBERON:0011143;1.39e-07;24!UBERON:0000353;1.73e-07;15!UBERON:0000490;5.74e-07;33!UBERON:0000072;7.73e-07;37!UBERON:0001737;9.35e-07;9!UBERON:0001557;9.35e-07;9!UBERON:0003914;9.86e-07;74 | |||
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078 | ||
|short_description=p1@MTX1 | |||
}} | }} |
Latest revision as of 11:52, 17 September 2015
Short description: | p1@MTX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTX1_5end |
Coexpression cluster: | C534_Mesenchymal_Alveolar_Renal_Placental_Fibroblast_Smooth_Tracheal |
Association with transcript: | 0bp_to_ENST00000424959, ENST00000481771_5end |
EntrezGene: | MTX1 |
HGNC: | 7504 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.11e-31 | 253 |
embryonic cell | 1.12e-31 | 250 |
mesodermal cell | 4.03e-20 | 121 |
electrically responsive cell | 3.63e-12 | 61 |
electrically active cell | 3.63e-12 | 61 |
muscle cell | 4.12e-12 | 55 |
muscle precursor cell | 2.99e-11 | 58 |
myoblast | 2.99e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.99e-11 | 58 |
smooth muscle cell | 1.74e-09 | 43 |
smooth muscle myoblast | 1.74e-09 | 43 |
lining cell | 9.29e-09 | 58 |
barrier cell | 9.29e-09 | 58 |
epithelial cell of nephron | 9.79e-09 | 15 |
kidney cell | 2.83e-08 | 17 |
kidney epithelial cell | 2.83e-08 | 17 |
kidney cortical cell | 9.35e-08 | 12 |
renal cortical epithelial cell | 9.35e-08 | 12 |
vascular associated smooth muscle cell | 2.04e-07 | 32 |
squamous epithelial cell | 2.36e-07 | 63 |
ectodermal cell | 3.82e-07 | 72 |
meso-epithelial cell | 4.22e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.79e-10 | 143 |
cancer | 1.97e-09 | 235 |
disease of cellular proliferation | 3.39e-09 | 239 |
carcinoma | 3.40e-08 | 106 |