FFCP PHASE1:Hg19::chr1:33795770..33795789,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:33795770..33795789,- to FFCP PHASE1:Hg19::chr1:33795770..33795789,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1912 | |EntrezGene=1912 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3183 | |HGNC=3183 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IXK0 | |UniProt=Q8IXK0 | ||
|association_with_transcript=-60bp_to_BC015450_5end | |||
|cluster_id=chr1:33795770..33795789,- | |||
|description=CAGE_peak_4_at_PHC2_5end | |||
|id=chr1:33795770..33795789,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.21e-07,58;CL:0000056,3.21e-07,58;CL:0000355,3.21e-07,58;CL:0000187,9.87e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.14e-07!143;UBERON:0000914!3.85e-07!83;UBERON:0002329!3.85e-07!83;UBERON:0003077!3.85e-07!83;UBERON:0003059!3.85e-07!83;UBERON:0007282!3.85e-07!83;UBERON:0009618!3.85e-07!83;UBERON:0007285!3.85e-07!83;UBERON:0004290!9.49e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.73e-12,78;UBERON:0002329,5.34e-10,71;UBERON:0003059,5.34e-10,71;UBERON:0007282,5.34e-10,71;UBERON:0004290,5.34e-10,71;UBERON:0009618,5.34e-10,71;UBERON:0003077,1.12e-09,72;UBERON:0007285,1.12e-09,72;UBERON:0007524,2.30e-09,73;UBERON:0005256,3.13e-08,122;UBERON:0000486,3.68e-08,83;UBERON:0003104,3.13e-07,160;UBERON:0009142,3.13e-07,160;UBERON:0002385,4.52e-07,64;UBERON:0001015,4.52e-07,64;UBERON:0000383,4.52e-07,64;UBERON:0001134,4.60e-07,62;UBERON:0002036,4.60e-07,62;UBERON:0003082,4.60e-07,62 | |||
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| ||
|short_description=p4@PHC2 | |||
}} | }} |
Latest revision as of 17:14, 17 September 2015
Short description: | p4@PHC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PHC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_BC015450_5end |
EntrezGene: | PHC2 |
HGNC: | 3183 |
UniProt: | Q8IXK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.21e-07 | 58 |
myoblast | 3.21e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.21e-07 | 58 |
muscle cell | 9.87e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.73e-12 | 78 |
somite | 5.34e-10 | 71 |
presomitic mesoderm | 5.34e-10 | 71 |
presumptive segmental plate | 5.34e-10 | 71 |
dermomyotome | 5.34e-10 | 71 |
trunk paraxial mesoderm | 5.34e-10 | 71 |
paraxial mesoderm | 1.12e-09 | 72 |
presumptive paraxial mesoderm | 1.12e-09 | 72 |
dense mesenchyme tissue | 2.30e-09 | 73 |
trunk mesenchyme | 3.13e-08 | 122 |
multilaminar epithelium | 3.68e-08 | 83 |
mesenchyme | 3.13e-07 | 160 |
entire embryonic mesenchyme | 3.13e-07 | 160 |
muscle tissue | 4.52e-07 | 64 |
musculature | 4.52e-07 | 64 |
musculature of body | 4.52e-07 | 64 |
skeletal muscle tissue | 4.60e-07 | 62 |
striated muscle tissue | 4.60e-07 | 62 |
myotome | 4.60e-07 | 62 |