FFCP PHASE1:Hg19::chr20:30574762..30574771,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:30574762..30574771,+ | |||
|coexpression_cluster_id=C705 | |||
|description=CAGE_peak_at_chr20:30574762..30574771,+ | |||
|id=chr20:30574762..30574771,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.23e-38;3 | |||
|ontology_enrichment_disease=DOID:169!2.17e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3119;4.21e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.56e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000955!1.32e-37!69;UBERON:0006238!1.32e-37!69;UBERON:0001049!1.83e-36!57;UBERON:0005068!1.83e-36!57;UBERON:0006241!1.83e-36!57;UBERON:0007135!1.83e-36!57;UBERON:0002616!4.57e-35!59;UBERON:0002020!1.27e-33!34;UBERON:0003528!1.27e-33!34;UBERON:0001869!1.17e-31!32;UBERON:0002619!6.22e-31!22;UBERON:0001017!7.54e-31!82;UBERON:0000073!1.23e-30!94;UBERON:0001016!1.23e-30!94;UBERON:0001893!1.23e-29!34;UBERON:0005743!3.58e-29!86;UBERON:0001950!6.29e-29!20;UBERON:0002780!1.54e-27!41;UBERON:0001890!1.54e-27!41;UBERON:0006240!1.54e-27!41;UBERON:0003075!2.76e-27!86;UBERON:0007284!2.76e-27!86;UBERON:0000956!4.90e-27!25;UBERON:0000203!4.90e-27!25;UBERON:0002791!6.87e-27!33;UBERON:0003080!8.30e-27!42;UBERON:0002346!7.90e-26!90;UBERON:0000033!1.64e-20!123;UBERON:0003056!8.99e-20!61;UBERON:0000153!2.74e-19!129;UBERON:0007811!2.74e-19!129;UBERON:0000200!8.49e-19!6;UBERON:0002680!4.07e-18!9;UBERON:0001895!4.07e-18!9;UBERON:0010092!4.07e-18!9;UBERON:0004121!2.58e-17!169;UBERON:0000924!9.08e-17!173;UBERON:0006601!9.08e-17!173;UBERON:0007023!1.32e-15!115;UBERON:0001871!2.66e-14!7;UBERON:0002771!4.40e-14!3;UBERON:0000988!1.19e-13!3;UBERON:0004733!1.94e-13!12;UBERON:0002028!1.94e-13!12;UBERON:0007277!1.94e-13!12;UBERON:0004732!2.34e-12!13;UBERON:0003076!1.26e-10!15;UBERON:0003057!1.26e-10!15;UBERON:0000025!5.30e-10!194;UBERON:0002148!9.63e-10!2;UBERON:0009662!9.63e-10!2;UBERON:0000064!4.31e-09!219;UBERON:0001872!6.00e-09!5;UBERON:0002308!4.45e-08!9;UBERON:0000125!4.45e-08!9;UBERON:0002037!5.17e-08!6;UBERON:0006215!5.17e-08!6;UBERON:0004111!5.75e-07!241;UBERON:0006331!9.07e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;6.48e-20;6!UBERON:0000007;2.05e-15;2!UBERON:0002702;2.05e-15;2!UBERON:0002680;1.23e-13;9!UBERON:0001895;1.23e-13;9!UBERON:0000073;1.14e-11;53!UBERON:0002616;1.14e-11;53!UBERON:0001870;9.90e-11;3!UBERON:0004733;1.76e-10;12!UBERON:0002028;1.76e-10;12!UBERON:0004732;9.51e-10;13!UBERON:0003296;2.26e-08;4!UBERON:0010133;2.26e-08;4!UBERON:0001016;1.12e-07;83!UBERON:0001872;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.48e-20,6;UBERON:0006215,6.48e-20,6;UBERON:0002702,1.54e-15,2;UBERON:0000007,2.37e-15,2;UBERON:0002680,1.23e-13,9;UBERON:0001895,1.23e-13,9;UBERON:0010092,1.23e-13,9;UBERON:0000073,1.86e-13,53;UBERON:0002616,1.86e-13,53;UBERON:0001049,9.09e-13,56;UBERON:0005068,9.09e-13,56;UBERON:0006241,9.09e-13,56;UBERON:0007135,9.09e-13,56;UBERON:0001870,8.17e-11,3;UBERON:0004733,1.77e-10,12;UBERON:0002028,1.77e-10,12;UBERON:0007277,1.77e-10,12;UBERON:0000955,1.85e-10,68;UBERON:0006238,1.85e-10,68;UBERON:0004732,9.51e-10,13;UBERON:0001017,7.26e-09,81;UBERON:0003075,7.26e-09,82;UBERON:0007284,7.26e-09,82;UBERON:0003076,1.42e-08,15;UBERON:0003057,1.42e-08,15;UBERON:0002346,1.81e-08,86;UBERON:0003296,2.43e-08,4;UBERON:0010133,2.43e-08,4;UBERON:0001016,5.05e-08,89;UBERON:0010371,4.67e-07,104;UBERON:0001872,5.70e-07,5;UBERON:0002780,9.42e-07,41;UBERON:0001890,9.42e-07,41;UBERON:0003080,9.42e-07,41;UBERON:0006240,9.42e-07,41 | |||
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|short_description=p@chr20:30574762..30574771,+ | |||
}} | }} |
Latest revision as of 12:54, 28 July 2015
Short description: | p@chr20:30574762..30574771, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:30574762..30574771, + |
Coexpression cluster: | C705_small_cerebellum_parietal_occipital_temporal_amygdala_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.48e-20 | 6 |
rhombic lip | 6.48e-20 | 6 |
middle frontal gyrus | 1.54e-15 | 2 |
pituitary gland | 2.37e-15 | 2 |
regional part of metencephalon | 1.23e-13 | 9 |
metencephalon | 1.23e-13 | 9 |
future metencephalon | 1.23e-13 | 9 |
regional part of nervous system | 1.86e-13 | 53 |
regional part of brain | 1.86e-13 | 53 |
neural tube | 9.09e-13 | 56 |
neural rod | 9.09e-13 | 56 |
future spinal cord | 9.09e-13 | 56 |
neural keel | 9.09e-13 | 56 |
frontal cortex | 8.17e-11 | 3 |
segmental subdivision of hindbrain | 1.77e-10 | 12 |
hindbrain | 1.77e-10 | 12 |
presumptive hindbrain | 1.77e-10 | 12 |
brain | 1.85e-10 | 68 |
future brain | 1.85e-10 | 68 |
segmental subdivision of nervous system | 9.51e-10 | 13 |
central nervous system | 7.26e-09 | 81 |
neural plate | 7.26e-09 | 82 |
presumptive neural plate | 7.26e-09 | 82 |
posterior neural tube | 1.42e-08 | 15 |
chordal neural plate | 1.42e-08 | 15 |
neurectoderm | 1.81e-08 | 86 |
gland of diencephalon | 2.43e-08 | 4 |
neuroendocrine gland | 2.43e-08 | 4 |
nervous system | 5.05e-08 | 89 |
ecto-epithelium | 4.67e-07 | 104 |
parietal lobe | 5.70e-07 | 5 |
regional part of forebrain | 9.42e-07 | 41 |
forebrain | 9.42e-07 | 41 |
anterior neural tube | 9.42e-07 | 41 |
future forebrain | 9.42e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.56e-09 | 14 |