FFCP PHASE1:Hg19::chr2:238877447..238877459,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:238877447..238877459,+ to FFCP PHASE1:Hg19::chr2:238877447..238877459,+: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140739 | |EntrezGene=140739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12480 | |HGNC=12480 | ||
|TSSclassifier=strong | |||
|UniProt=C9J9P8 | |UniProt=C9J9P8 | ||
|association_with_transcript=12bp_to_ENST00000434655_5end | |||
|cluster_id=chr2:238877447..238877459,+ | |||
|description=CAGE_peak_5_at_UBE2F_5end | |||
|id=chr2:238877447..238877459,+ | |||
|ontology_enrichment_celltype=CL:0002274!3.76e-09!5;CL:0000457!3.76e-09!5;CL:0002191!3.76e-09!5;CL:0000097!3.76e-09!5;CL:0000831!3.76e-09!5;CL:0002028!3.76e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000453;3.19e-28;5!CL:0000990;5.29e-16;8!CL:0000451;3.27e-13;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.77e-28,5;CL:0000990,4.90e-16,8;CL:0000451,3.07e-13,10 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.57e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.15e-17!115;UBERON:0001049!4.36e-14!57;UBERON:0005068!4.36e-14!57;UBERON:0006241!4.36e-14!57;UBERON:0007135!4.36e-14!57;UBERON:0002308!4.25e-12!9;UBERON:0000125!4.25e-12!9;UBERON:0002616!6.26e-12!59;UBERON:0002780!1.10e-10!41;UBERON:0001890!1.10e-10!41;UBERON:0006240!1.10e-10!41;UBERON:0003080!2.61e-10!42;UBERON:0000955!8.04e-10!69;UBERON:0006238!8.04e-10!69;UBERON:0001017!1.04e-09!82;UBERON:0005743!1.22e-09!86;UBERON:0002020!1.53e-09!34;UBERON:0003528!1.53e-09!34;UBERON:0001893!3.18e-09!34;UBERON:0009663!5.71e-09!7;UBERON:0000073!7.09e-09!94;UBERON:0001016!7.09e-09!94;UBERON:0002791!1.65e-08!33;UBERON:0002346!2.21e-08!90;UBERON:0003075!2.52e-08!86;UBERON:0007284!2.52e-08!86;UBERON:0002298!4.58e-08!8;UBERON:0001869!2.49e-07!32;UBERON:0002420!9.27e-07!9;UBERON:0007245!9.27e-07!9;UBERON:0010009!9.27e-07!9;UBERON:0010011!9.27e-07!9;UBERON:0000454!9.27e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.57e-17;1!UBERON:0001785;9.57e-17;1!UBERON:0002464;9.57e-17;1!UBERON:0004904;9.57e-17;1!UBERON:0001021;9.57e-17;1!UBERON:0002038;2.08e-16;1!UBERON:0009661;2.08e-16;1!UBERON:0002950;2.08e-16;1!UBERON:0001891;2.08e-16;1!UBERON:0001897;4.89e-09;2!UBERON:0003714;4.89e-09;2!UBERON:0005162;4.89e-09;2!UBERON:0000122;4.89e-09;2!UBERON:0010225;4.89e-09;2!UBERON:0002148;7.21e-09;2!UBERON:0006331;7.21e-09;2!UBERON:0009662;7.21e-09;2!UBERON:0000125;1.20e-07;9!UBERON:0002308;1.20e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.57e-17,1;UBERON:0001785,7.57e-17,1;UBERON:0002464,7.57e-17,1;UBERON:0004904,7.57e-17,1;UBERON:0001021,7.57e-17,1;UBERON:0003902,7.57e-17,1;UBERON:0005425,7.57e-17,1;UBERON:0002038,3.07e-16,1;UBERON:0009661,3.07e-16,1;UBERON:0002950,3.07e-16,1;UBERON:0001891,3.07e-16,1;UBERON:0009616,3.07e-16,1;UBERON:0010286,3.07e-16,1;UBERON:0003714,4.34e-09,2;UBERON:0005162,4.34e-09,2;UBERON:0000122,4.34e-09,2;UBERON:0001897,4.70e-09,2;UBERON:0010225,4.70e-09,2;UBERON:0002148,7.49e-09,2;UBERON:0006331,7.49e-09,2;UBERON:0009662,7.49e-09,2;UBERON:0000125,1.33e-07,9;UBERON:0002308,1.33e-07,9 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.157421562627358,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.512321413058201,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0,1.83905144929746,0,0.473447805734733,0,0.445641827540694,0,0,0,0.512365278902701,0,0.493313713811028,0.829050053357545,1.15921234294021,0,0,0,2.03956816855619,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0.194874010322397,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.264145302039678,0.621984346622316,0.576479813667846,0.25248486685276,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.924843963529383,0,0,3.4470966623826,0.211673582723883,0,0.280797178113459,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0.19538809540204,0,0,0.811367035427949,0,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,5.10966490978682,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,1.16354660725395,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0.554645257684261,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,5.26122833866349,2.12583744501381,1.4720885483026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0.40781839786099,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.392616934229891,1.18818560130834,0,0,0.187967835959707,0.0644578879735772,0.0999411559249289,0,0,0,0,0,1.14671666521161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,2.48750831837634,0.517164979309476,0.213233981900981,0,0.452122368852043,0.31037357147929,0,0.636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.157421562627358,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.512321413058201,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0,1.83905144929746,0,0.473447805734733,0,0.445641827540694,0,0,0,0.512365278902701,0,0.493313713811028,0.829050053357545,1.15921234294021,0,0,0,2.03956816855619,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0.194874010322397,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.264145302039678,0.621984346622316,0.576479813667846,0.25248486685276,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.924843963529383,0,0,3.4470966623826,0.211673582723883,0,0.280797178113459,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0.19538809540204,0,0,0.811367035427949,0,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,5.10966490978682,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,1.16354660725395,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0.554645257684261,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,5.26122833866349,2.12583744501381,1.4720885483026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0.40781839786099,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.392616934229891,1.18818560130834,0,0,0.187967835959707,0.0644578879735772,0.0999411559249289,0,0,0,0,0,1.14671666521161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,2.48750831837634,0.517164979309476,0.213233981900981,0,0.452122368852043,0.31037357147929,0,0.636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p5@UBE2F | |||
}} | }} |
Latest revision as of 05:18, 16 September 2015
Short description: | p5@UBE2F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UBE2F_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000434655_5end |
EntrezGene: | UBE2F |
HGNC: | 12480 |
UniProt: | C9J9P8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.77e-28 | 5 |
conventional dendritic cell | 4.90e-16 | 8 |
dendritic cell | 3.07e-13 | 10 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.57e-17 | 1 |
cranial nerve | 7.57e-17 | 1 |
nerve trunk | 7.57e-17 | 1 |
nerve connecting eye with brain | 7.57e-17 | 1 |
nerve | 7.57e-17 | 1 |
retinal neural layer | 7.57e-17 | 1 |
presumptive neural retina | 7.57e-17 | 1 |
substantia nigra | 3.07e-16 | 1 |
midbrain nucleus | 3.07e-16 | 1 |
regional part of midbrain | 3.07e-16 | 1 |
midbrain | 3.07e-16 | 1 |
presumptive midbrain | 3.07e-16 | 1 |
midbrain neural tube | 3.07e-16 | 1 |
neural tissue | 4.34e-09 | 2 |
multi cell component structure | 4.34e-09 | 2 |
neuron projection bundle | 4.34e-09 | 2 |
dorsal plus ventral thalamus | 4.70e-09 | 2 |
thalamic complex | 4.70e-09 | 2 |
locus ceruleus | 7.49e-09 | 2 |
brainstem nucleus | 7.49e-09 | 2 |
hindbrain nucleus | 7.49e-09 | 2 |
neural nucleus | 1.33e-07 | 9 |
nucleus of brain | 1.33e-07 | 9 |