FFCP PHASE1:Hg19::chr2:54683448..54683470,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:54683448..54683470,+ to FFCP PHASE1:Hg19::chr2:54683448..54683470,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6711 | |EntrezGene=6711 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11275 | |HGNC=11275 | ||
|TSSclassifier=strong | |||
|UniProt=B2ZZ89,Q01082 | |UniProt=B2ZZ89,Q01082 | ||
|association_with_transcript=0bp_to_NM_003128,uc002rxu.2_5end | |||
|cluster_id=chr2:54683448..54683470,+ | |||
|coexpression_cluster_id=C969 | |||
|description=CAGE_peak_1_at_SPTBN1_5end | |||
|id=chr2:54683448..54683470,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.43e-11!180;CL:0000222!4.31e-09!119;CL:0002139!4.65e-08!24;CL:0000057!3.23e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.39e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.76e-09,121;CL:0002139,4.38e-08,24;CL:0000057,1.70e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.67e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.85e-34!115;UBERON:0004111!4.94e-33!241;UBERON:0000477!7.73e-32!286;UBERON:0000025!1.08e-31!194;UBERON:0000475!1.71e-24!365;UBERON:0001049!8.53e-24!57;UBERON:0005068!8.53e-24!57;UBERON:0006241!8.53e-24!57;UBERON:0007135!8.53e-24!57;UBERON:0000119!1.35e-23!312;UBERON:0001017!2.37e-23!82;UBERON:0002616!3.82e-23!59;UBERON:0000483!3.99e-23!309;UBERON:0000955!4.04e-23!69;UBERON:0006238!4.04e-23!69;UBERON:0005743!8.24e-23!86;UBERON:0000073!1.04e-21!94;UBERON:0001016!1.04e-21!94;UBERON:0003075!1.20e-19!86;UBERON:0007284!1.20e-19!86;UBERON:0003080!1.58e-19!42;UBERON:0002780!7.19e-19!41;UBERON:0001890!7.19e-19!41;UBERON:0006240!7.19e-19!41;UBERON:0002346!2.97e-18!90;UBERON:0000481!8.05e-17!347;UBERON:0001893!1.72e-16!34;UBERON:0002020!2.17e-16!34;UBERON:0003528!2.17e-16!34;UBERON:0002791!6.53e-16!33;UBERON:0004872!8.34e-16!84;UBERON:0004121!1.59e-15!169;UBERON:0001869!1.79e-15!32;UBERON:0000468!3.02e-15!659;UBERON:0000924!8.15e-15!173;UBERON:0006601!8.15e-15!173;UBERON:0000033!3.28e-14!123;UBERON:0000467!2.15e-13!625;UBERON:0000153!2.24e-13!129;UBERON:0007811!2.24e-13!129;UBERON:0002619!2.90e-13!22;UBERON:0002049!3.00e-13!79;UBERON:0007798!3.00e-13!79;UBERON:0000480!4.48e-13!626;UBERON:0003056!7.33e-13!61;UBERON:0000055!1.17e-12!69;UBERON:0003914!3.79e-12!118;UBERON:0001950!4.47e-12!20;UBERON:0000956!1.09e-11!25;UBERON:0000203!1.09e-11!25;UBERON:0001981!5.05e-11!60;UBERON:0007500!5.05e-11!60;UBERON:0004537!5.05e-11!60;UBERON:0006965!5.05e-11!60;UBERON:0001009!1.90e-10!113;UBERON:0000064!4.52e-10!219;UBERON:0004535!1.71e-09!110;UBERON:0007100!5.07e-08!27;UBERON:0002050!1.13e-07!605;UBERON:0005423!1.13e-07!605;UBERON:0000922!1.31e-07!612;UBERON:0000923!1.73e-07!604;UBERON:0005291!1.73e-07!604;UBERON:0006598!1.73e-07!604;UBERON:0002532!1.73e-07!604;UBERON:0002100!1.74e-07!216;UBERON:0000062!4.02e-07!511;UBERON:0003103!5.70e-07!69;UBERON:0000948!8.96e-07!24;UBERON:0005498!8.96e-07!24;UBERON:0004140!8.96e-07!24;UBERON:0009881!8.96e-07!24;UBERON:0004141!8.96e-07!24;UBERON:0003084!8.96e-07!24;UBERON:0007005!8.96e-07!24;UBERON:0004139!8.96e-07!24;UBERON:0004291!8.96e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.31e-14;34!UBERON:0003528;5.33e-14;34!UBERON:0002020;5.33e-14;34!UBERON:0001869;5.94e-14;32!UBERON:0002780;6.86e-14;41!UBERON:0001890;6.86e-14;41!UBERON:0002791;7.78e-14;32!UBERON:0002619;2.63e-13;22!UBERON:0000073;1.17e-12;53!UBERON:0002616;1.17e-12;53!UBERON:0001950;4.10e-12;20!UBERON:0000956;1.02e-11;25!UBERON:0000203;1.02e-11;25!UBERON:0001017;2.61e-11;75!UBERON:0000955;2.14e-10;68!UBERON:0007023;7.63e-10;114!UBERON:0001016;3.44e-09;83!UBERON:0007100;2.79e-08;25!UBERON:0000948;5.33e-07;22 | |||
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|short_description=p1@SPTBN1 | |||
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Latest revision as of 15:19, 17 September 2015
Short description: | p1@SPTBN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPTBN1_5end |
Coexpression cluster: | C969_mature_insula_mesodermal_occipital_Preadipocyte_temporal_heart |
Association with transcript: | 0bp_to_NM_003128, uc002rxu.2_5end |
EntrezGene: | SPTBN1 |
HGNC: | 11275 |
UniProt: | B2ZZ89Q01082 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 1.76e-09 | 121 |
endothelial cell of vascular tree | 4.38e-08 | 24 |
fibroblast | 1.70e-07 | 76 |