FFCP PHASE1:Hg19::chr2:74120126..74120142,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:74120126..74120142,+ to FFCP PHASE1:Hg19::chr2:74120126..74120142,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=72 | |EntrezGene=72 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=145 | |HGNC=145 | ||
|TSSclassifier=strong | |||
|UniProt=P63267 | |UniProt=P63267 | ||
|association_with_transcript=0bp_to_ENST00000409624,ENST00000468543_5end | |||
|cluster_id=chr2:74120126..74120142,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_1_at_ACTG2_5end | |||
|id=chr2:74120126..74120142,+ | |||
|ontology_enrichment_celltype=CL:0000192!1.42e-14!42;CL:0000514!1.42e-14!42;CL:0000055!1.01e-13!180;CL:0000393!1.21e-13!60;CL:0000211!1.21e-13!60;CL:0000183!8.61e-13!59;CL:0000187!1.17e-12!54;CL:0000680!1.18e-11!57;CL:0000056!1.18e-11!57;CL:0000355!1.18e-11!57;CL:0000359!2.40e-10!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;8.71e-12;43!CL:0000359;2.59e-10;32!CL:0000187;1.65e-07;55!CL:0000393;4.96e-07;61!CL:0000211;4.96e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.23e-16,43;CL:0000514,3.23e-16,43;CL:0000393,3.07e-14,61;CL:0000211,3.07e-14,61;CL:0000187,4.30e-13,55;CL:0000680,1.54e-11,58;CL:0000056,1.54e-11,58;CL:0000355,1.54e-11,58;CL:0000359,5.48e-11,32 | |||
|ontology_enrichment_development_v019=CL:0000514;8.71e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!7.42e-20!347;UBERON:0000914!1.85e-14!83;UBERON:0002329!1.85e-14!83;UBERON:0003077!1.85e-14!83;UBERON:0003059!1.85e-14!83;UBERON:0007282!1.85e-14!83;UBERON:0009618!1.85e-14!83;UBERON:0007285!1.85e-14!83;UBERON:0002385!6.90e-14!63;UBERON:0001015!6.90e-14!63;UBERON:0000383!6.90e-14!63;UBERON:0007023!9.94e-14!115;UBERON:0000475!2.55e-13!365;UBERON:0001134!8.95e-13!61;UBERON:0002036!8.95e-13!61;UBERON:0003082!8.95e-13!61;UBERON:0005256!5.27e-12!143;UBERON:0004290!5.28e-12!70;UBERON:0000468!2.23e-11!659;UBERON:0003104!2.63e-11!238;UBERON:0009142!2.63e-11!238;UBERON:0000477!6.63e-10!286;UBERON:0000486!4.74e-09!82;UBERON:0000924!6.03e-09!173;UBERON:0006601!6.03e-09!173;UBERON:0000922!6.27e-09!612;UBERON:0000033!6.95e-09!123;UBERON:0000153!7.52e-09!129;UBERON:0007811!7.52e-09!129;UBERON:0004121!9.37e-09!169;UBERON:0000467!4.29e-08!625;UBERON:0000480!4.58e-08!626;UBERON:0005156!8.01e-08!59;UBERON:0000990!8.01e-08!59;UBERON:0002050!1.02e-07!605;UBERON:0005423!1.02e-07!605;UBERON:0000923!2.02e-07!604;UBERON:0005291!2.02e-07!604;UBERON:0006598!2.02e-07!604;UBERON:0002532!2.02e-07!604;UBERON:0000062!6.01e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.58e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,5.16e-14,64;UBERON:0001015,5.16e-14,64;UBERON:0000383,5.16e-14,64;UBERON:0001134,8.62e-13,62;UBERON:0002036,8.62e-13,62;UBERON:0003082,8.62e-13,62;UBERON:0007023,1.20e-12,114;UBERON:0007524,6.04e-12,73;UBERON:0003077,1.85e-11,72;UBERON:0007285,1.85e-11,72;UBERON:0002329,2.91e-11,71;UBERON:0003059,2.91e-11,71;UBERON:0007282,2.91e-11,71;UBERON:0004290,2.91e-11,71;UBERON:0009618,2.91e-11,71;UBERON:0005256,2.93e-11,122;UBERON:0003104,5.17e-11,160;UBERON:0009142,5.17e-11,160;UBERON:0011216,1.43e-10,223;UBERON:0007503,4.01e-10,78;UBERON:0001007,2.06e-08,145;UBERON:0001555,2.06e-08,145;UBERON:0007026,2.06e-08,145;UBERON:0002050,2.94e-08,564;UBERON:0000922,1.05e-07,592;UBERON:0000486,1.57e-07,83;UBERON:0004119,1.80e-07,160;UBERON:0000925,1.80e-07,160;UBERON:0006595,1.80e-07,160;UBERON:0000923,1.94e-07,560;UBERON:0010316,1.94e-07,560;UBERON:0005291,1.94e-07,560;UBERON:0006598,1.94e-07,560;UBERON:0010317,1.94e-07,560;UBERON:0002532,1.94e-07,560;UBERON:0004921,2.31e-07,118;UBERON:0005156,3.23e-07,59;UBERON:0000990,3.23e-07,59;UBERON:0005423,5.00e-07,581 | |||
|phase1_expression=0,0.428201047781966,0.704772020479856,6.00439790118782,29.499432232201,0,929.6105528777,0.631719873426831,0.261185628199839,4.66894479352867,15.3516256953934,0.655324116390517,5.27533956456907,0.495065411840187,0.662794751455832,64.5432140593704,57.2559801622778,58.4248072309899,55.1364062633273,30.164659228813,8.36402834101437,212.522301162144,37.7831503012995,11.2237028559765,41.6801563454745,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,11.502590550034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67186495390678,0,0,0,0.334231370655521,1.76763544484902,0.886135578334485,3.79125409271022,0.128091319725675,0.520237390239513,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0.637130828648193,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,4.47518966452356,3.61439152384566,24.5655576211586,0.724232594804119,0,2.43317435151318,45.6603166902448,26.8292570929702,18.7088093526358,437.47011216236,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,8.28578699070815,48.7032512661412,14.8157698647558,0.264818361626438,0.860509862246441,3.54668382198357,52.1430168132346,294.627228213986,70.5469188473078,2.48968828319813,0.269421344139376,0.653847612453835,95.5065368439517,32.2658517708799,6.32667865951251,0,1.1409436430889,0.448346041655403,0,0.809364721840658,0.98315564691574,0.816616685019573,31.3227509145008,0.103325781175765,173.44841716318,158.498101667555,12.7422590671324,3.59309070908119,9.09015015351958,6.13080747372624,7.48073111807294,52.2383368848197,11.9530240361618,80.0768853972161,11.4566504991621,2.15267562826634,19.0066076048525,9.32500365102072,0,0.206105058476878,1.03056216018252,1.67505170698431,0.168776332241266,0.0974370051611986,0.757301322732344,0.644349290496095,122.689357125478,3.55009592516614,11.1834829032681,118.35329343272,1.93260853163297,0.818238361772504,0.573609190778008,9.27000166584925,5.96383957446684,5.34492137199785,7.56725701612204,7.82194637714448,4.37972830890996,25.0319251727706,21.2269509603652,8.28809528114883,0.464367928031979,0,17.3910996058571,17.7013924582007,17.5938051814942,19.4117392009013,25.0561360706267,22.066167577332,15.7752630547392,15.6977172100277,23.4695765737298,1.4763109092493,92.5595707102742,33.3374949178434,213.162631509036,0,0,0.590789906681404,0,1.22988438543114,5.49016992955282,0.329250856225877,1.1240175325762,0.201057944823262,3.98130314181677,8.14520763275812,4.15973914111831,11.5465073620219,3.70977295920246,70.6800339299646,0.433099343283221,0.462985512576611,0,1.58040879591855,0.858486162094873,0,0,0,37.4935335947108,1.6798212819886,31.7576217822946,0.268675568108545,3.19697332365358,3.4504441124869,0,0,0.414656231081544,0.432359860250884,0.12624243342638,0.317489471460845,0.381988425558278,0,6.84289784090821,1.43958489784653,0.300343057843917,0,29.2662130141391,20.0541631663309,23.3949131768831,249.882226559784,10.7296933755565,0,434.276944383094,206.974799453619,0,1.41849132023278,0.532844358032199,168.428076529298,0,9.05564370458846,0,158.149417190433,12.6712299669349,0,4.35766729300147,0.099972991182057,0,0,0,89.3800710983603,102.227122892361,1.42636905040718,0.144781306667579,0,0.895304816199478,0,0,0,0,0.508189248444927,1.30139853857622,31.7048413238855,12.0611711040731,12.1208362814101,0,0,0,1.71768088406796,2.50085260529839,6.78162559249339,101.905722150095,3.03329280955175,1.41932173530541,0.117141414992713,390.026145247124,40.9333507300773,14.4862299809507,130.852442911481,156.713793260448,11.9899387965954,246.905259560516,64.8541071002518,0,0,0,0,8.32177197552485,3.93107381328584,0,0,0.561320188866147,0.384417447767103,0,3.69964018630297,0,0.616838775210622,1.06537035187876,3.44934055257998,7.78881643775432,0.813472649219715,0.362578348774867,3.40860999515584,0,614.257297680646,363.453971341407,496.568159451339,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0,4.62681758070868,0.812839312631559,2.00675909541941,0,0,0,0,0,0,0.328014645699706,0,67.6979446525535,0.183138929636687,0.082509499920588,2.87132768998086,0.650060246036521,17.6752322828576,9.6670718292122,0.308097234229289,0.307007349452259,3.1702411671442,0.322260734604821,0,2.13066568540252,124.377753798492,0,0,0,0,86.4612721692952,59.8143458978216,0.6970372701606,19.4061155510936,17.0337929701447,1.73986598415015,149.37132059776,102.334294020524,104.948660159426,262.278543091824,136.491218849459,176.56947600482,35.5189360068154,2.22742273548156,57.3012507345438,88.4972491309908,60.9472206014042,35.2259083013602,17.5898758968785,0,0.421258456238981,551.513758910327,22.9090680253407,2.11300293513511,186.049379249085,165.585760817798,3.39024349860728,81.0507055012802,26.5375590096488,93.8284894443052,45.1444916728016,66.9012647087565,2446.28750466236,986.787841447704,491.840522021294,28.5388590886062,94.5155774546226,2443.19670264656,9.93330979397674,0.21110763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|short_description=p1@ACTG2 | |||
}} | }} |
Latest revision as of 09:46, 18 September 2015
Short description: | p1@ACTG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACTG2_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_ENST00000409624, ENST00000468543_5end |
EntrezGene: | ACTG2 |
HGNC: | 145 |
UniProt: | P63267 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.23e-16 | 43 |
smooth muscle myoblast | 3.23e-16 | 43 |
electrically responsive cell | 3.07e-14 | 61 |
electrically active cell | 3.07e-14 | 61 |
muscle cell | 4.30e-13 | 55 |
muscle precursor cell | 1.54e-11 | 58 |
myoblast | 1.54e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.54e-11 | 58 |
vascular associated smooth muscle cell | 5.48e-11 | 32 |