FFCP PHASE1:Hg19::chr3:108308695..108308704,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:108308695..108308704,- to FFCP PHASE1:Hg19::chr3:108308695..108308704,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57650 | |EntrezGene=57650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29302 | |HGNC=29302 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TCG1 | |UniProt=Q8TCG1 | ||
|association_with_transcript=-204bp_to_ENST00000487834,NM_020890,uc003dxb.3,uc010hpw.1_5end | |||
|cluster_id=chr3:108308695..108308704,- | |||
|description=CAGE_peak_4_at_KIAA1524_5end | |||
|id=chr3:108308695..108308704,- | |||
|ontology_enrichment_celltype=CL:0002087!1.49e-13!119;CL:0000738!1.58e-12!140;CL:0002031!3.22e-12!124;CL:0000542!2.26e-09!53;CL:0000051!2.26e-09!53;CL:0000838!4.87e-09!52;CL:0002057!1.19e-08!42;CL:0000860!2.14e-08!45;CL:0000037!2.70e-08!172;CL:0000566!2.70e-08!172;CL:0002032!9.70e-08!165;CL:0000837!9.70e-08!165;CL:0000988!1.01e-07!182;CL:0000084!6.09e-07!25;CL:0000827!6.09e-07!25;CL:0000003!6.82e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.70e-12;3!CL:0000791;1.24e-11;18!CL:0000789;1.24e-11;18!CL:0002419;1.24e-11;18!CL:0000084;4.81e-10;25!CL:0000624;6.01e-10;6!CL:0000542;8.44e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.41e-14,52;CL:0000542,1.60e-13,53;CL:0000051,1.60e-13,53;CL:0002087,4.46e-13,115;CL:0000738,2.43e-12,136;CL:0002031,2.59e-12,120;CL:0000623,3.00e-12,3;CL:0000825,3.00e-12,3;CL:0000791,8.61e-12,18;CL:0000789,8.61e-12,18;CL:0002420,8.61e-12,18;CL:0002419,8.61e-12,18;CL:0000790,8.61e-12,18;CL:0000084,3.59e-10,25;CL:0000827,3.59e-10,25;CL:0000624,4.03e-10,6;CL:0000988,7.82e-09,177;CL:0000037,8.70e-09,168;CL:0002032,1.05e-07,161;CL:0000837,1.05e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.24e-11;18!CL:0000051;8.44e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.88e-09;2!UBERON:0002757;7.88e-09;2!UBERON:0010134;7.88e-09;2!UBERON:0005408;7.88e-09;2!UBERON:0001899;7.88e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.90e-09,2;UBERON:0002757,8.90e-09,2;UBERON:0010134,8.90e-09,2;UBERON:0005408,8.90e-09,2;UBERON:0001899,8.90e-09,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.627713197974014,0,0.0821005894499457,0.157421562627358,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0.739508020333575,0.852139206383318,0.142169232487422,0,0.553995408531877,0.401088894940283,2.17010870715852,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0.697287110717054,0.822335776043652,0.929119112685311,0.575384784644301,1.2808035326455,1.6553756092201,0.344745680736619,1.93645405075148,0,0,0.545812300115692,0.898893937780338,0.612167784741805,1.92557416245656,0,0.989553900560148,1.19678194572979,0.426224750532694,0.580418477257168,0,1.86846674698672,0.502497330513487,0.521482918420201,0.868755378820466,0.605399502633369,0,2.84816148696796,0.633765858935825,0.425208599930087,0.419317291016752,0,0.150176892841506,0,0,0.19891667719909,0.730656615058536,1.75996244461323,0,0.889509253863555,0,0.800791974072025,1.14950487990897,1.32208974556972,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0,1.7703879310245,3.14408610199332,2.05601498999509,0.167186495390678,0.977766799900771,0.473447805734733,0,0.668462741311041,1.76763544484902,1.55073726208535,2.70803863765016,0,0.260118695119756,0.493313713811028,0.829050053357545,0.289803085735052,1.33457906845854,0.535081656179426,2.09071047609954,0.793165398882963,0.766440987203842,1.03088233644789,1.51811815211702,0.95569624297229,0,0,0.451725357233318,0.383959833463255,1.24930726552346,0.473554504088034,0,1.81446068902259,2.13952156626806,2.17236605824198,0,0,0.12786256184353,1.0843174571537,0.50133791063589,0.289693037921647,0,0,0.283604451492204,0,0.175669571386252,0,0.364295288292542,0,0,0.348259474598534,0,0.238490624305342,1.14398982156026,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0.23486899728753,0.485618833104395,0.561803226808994,0,0.122834317311768,0.103325781175765,0,0,0,0,0.673344455816265,0.125118519871964,0.831192346452549,0.438977620880838,0,0.300476117813194,0.340296549480063,0.358779271377724,0,0.423863802319124,1.20036438433761,0.515262646192195,0.515281080091258,0.558350568994769,1.35021065793013,0.584622030967192,1.26216887122057,0.276149695926898,0.161646056818812,0,0.302256294682921,0.169560592310488,0.966304265816484,1.36373060295417,0.860413786167011,0.243947412259191,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.839910640994298,0.567100388969546,0.53735113621709,2.90633938513962,0.383382679165211,0,0,0.621984346622316,0,0.25248486685276,0,0,0,0,0,0,0,0,0.43596006883328,0.36669142910475,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0.112085143993527,2.1673383622212,2.58753089831421,2.43851768931522,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0,0.82707210449155,2.15714200818617,0.74709290462411,1.81876542867756,0,0,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0.657017248110473,0,0.697262270759755,0,0.200506470303285,0.276242966807689,0.229628896329213,0.182091168006717,0,0,0.0770153371044148,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0.522870902049801,0,0,0,0,0,0.082509499920588,0.574265537996172,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0.255679882248303,0,0.495854746082934,0,2.16941611240793,0,0.464845549297286,0,0.6970372701606,0,0,0,0.37064843820784,0.286249773483982,0,0,0.38126038784765,0,0,1.27281299170375,0,0.359744915166629,0,0,0,0,0,0,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0.66343897524122,0.438450885253763,1.15755106853338,0,0,0,0.281695602532241,0.573645408816206,0.0982490410131212,0,0,0,0.329294892959902,0,0,0.384888450902048,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0,0.648473311192717,1.08006287447623,0,0,0,0,0.557409525377156,0,0.355709216742071,0,0,0.383010740264733,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0.66866030566487,0.852408440419239,0.23874448473769,0,0.614321404198464,0,0,0.222617410045812,1.31843099381408,0,0,0.2762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| ||
|short_description=p4@KIAA1524 | |||
}} | }} |
Latest revision as of 11:29, 19 September 2015
Short description: | p4@KIAA1524 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KIAA1524_5end |
Coexpression cluster: | NA |
Association with transcript: | -204bp_to_ENST00000487834, NM_020890, uc003dxb.3, uc010hpw.1_5end |
EntrezGene: | KIAA1524 |
HGNC: | 29302 |
UniProt: | Q8TCG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.41e-14 | 52 |
lymphocyte | 1.60e-13 | 53 |
common lymphoid progenitor | 1.60e-13 | 53 |
nongranular leukocyte | 4.46e-13 | 115 |
leukocyte | 2.43e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 2.59e-12 | 120 |
natural killer cell | 3.00e-12 | 3 |
pro-NK cell | 3.00e-12 | 3 |
mature alpha-beta T cell | 8.61e-12 | 18 |
alpha-beta T cell | 8.61e-12 | 18 |
immature T cell | 8.61e-12 | 18 |
mature T cell | 8.61e-12 | 18 |
immature alpha-beta T cell | 8.61e-12 | 18 |
T cell | 3.59e-10 | 25 |
pro-T cell | 3.59e-10 | 25 |
CD4-positive, alpha-beta T cell | 4.03e-10 | 6 |
hematopoietic cell | 7.82e-09 | 177 |
hematopoietic stem cell | 8.70e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.05e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
pineal body | 8.90e-09 | 2 |
regional part of epithalamus | 8.90e-09 | 2 |
secretory circumventricular organ | 8.90e-09 | 2 |
circumventricular organ | 8.90e-09 | 2 |
epithalamus | 8.90e-09 | 2 |