FFCP PHASE1:Hg19::chr4:109089996..109090012,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:109089996..109090012,- to FFCP PHASE1:Hg19::chr4:109089996..109090012,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJU2,Q659G9 | |UniProt=Q9UJU2,Q659G9 | ||
|association_with_transcript=99bp_to_ENST00000379951,NM_001130713,NM_001130714,NM_016269_5end | |||
|cluster_id=chr4:109089996..109090012,- | |||
|coexpression_cluster_id=C1082 | |||
|description=CAGE_peak_5_at_LEF1_5end | |||
|id=chr4:109089996..109090012,- | |||
|ontology_enrichment_celltype=CL:0000791!2.59e-14!18;CL:0000789!2.59e-14!18;CL:0002420!2.59e-14!18;CL:0002419!2.59e-14!18;CL:0000790!2.59e-14!18;CL:0000084!5.70e-13!25;CL:0000827!5.70e-13!25;CL:0000625!2.82e-10!11;CL:0000542!3.58e-09!53;CL:0000051!3.58e-09!53;CL:0000838!1.14e-08!52;CL:0000624!6.12e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.69e-31;18!CL:0000789;1.69e-31;18!CL:0002419;1.69e-31;18!CL:0000084;5.74e-31;25!CL:0000625;2.12e-21;11!CL:0000624;6.84e-14;6!CL:0000542;1.84e-11;53!CL:0000898;7.30e-08;3!CL:0000226;3.89e-07;3!CL:0000842;3.89e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.23e-31,18;CL:0000789,1.23e-31,18;CL:0002420,1.23e-31,18;CL:0002419,1.23e-31,18;CL:0000790,1.23e-31,18;CL:0000084,4.49e-31,25;CL:0000827,4.49e-31,25;CL:0000625,1.55e-21,11;CL:0000542,7.25e-21,53;CL:0000051,7.25e-21,53;CL:0000838,1.15e-19,52;CL:0000624,6.73e-14,6;CL:0002087,6.03e-08,115;CL:0000898,7.75e-08,3;CL:0000037,2.18e-07,168;CL:0000226,3.51e-07,3;CL:0000842,3.51e-07,3;CL:0000988,4.14e-07,177;CL:0000738,6.24e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;1.69e-31;18!CL:0000051;1.84e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.07e-11!115;UBERON:0000178!3.71e-10!15;UBERON:0000179!3.71e-10!15;UBERON:0000463!3.71e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.84e-17;15!UBERON:0000179;3.84e-17;15!UBERON:0000463;3.84e-17;15!UBERON:0002390;8.99e-12;32!UBERON:0002193;4.88e-08;42!UBERON:0004177;2.63e-07;5!UBERON:0005057;2.63e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.60e-17,15;UBERON:0000179,4.60e-17,15;UBERON:0000463,4.60e-17,15;UBERON:0004177,8.19e-08,7;UBERON:0005057,8.19e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0.382067028739756,0,0.393553906568396,0,0,0.464448369948228,0,0,0,0,0,0.293600439334847,0.553995408531877,0.200544447470142,0.868043482863407,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,7.47497126432566,5.50215067848831,3.90642848099067,4.17966238476695,10.1035902656413,4.2610302516126,11.6896037044747,1.22551502573691,5.59751224202191,4.87374568083967,5.41607727530031,0.512365278902701,0.260118695119756,4.43982342429925,4.69795030235942,6.66547097190621,9.49034004237187,12.3068780921268,7.31748666634838,2.03956816855619,4.21542542962113,4.81078423675682,4.55435445635105,7.00843911513013,4.55758417699493,1.90090408889675,4.51725357233318,3.71161172347813,2.49861453104692,2.60454977248419,3.28451198768419,1.20964045934839,1.60464117470104,4.05508330871837,0,0,0,0,0,0,0,0.973269740605272,0.283604451492204,0.221729397462564,0,0.654895377488563,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0.286804595389004,0.243947412259191,0.132529768321485,0.464775771478074,0.725627385107593,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.27072508770766,0.245976877086227,0,0.329250856225877,0,0.100528972411631,0.462942225792648,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0.50496973370552,0.253991577168676,1.14596527667483,0,0,0.514137463516618,1.8020583470635,0.571652865261156,0.897048674762886,0,0.51336800074665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,2.80315847317372,1.79680250791648,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,3.51505644408909,3.01999881146064,2.881644060693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0.0770153371044148,0,0,0.527758144464379,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.330037999682352,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,3.55213326462519,3.82318603571188,1.13929437434833,1.90585420366231,2.05681136543097,1.29694662238543,2.16012574895246,2.37937552888281,0,0,0,1.85803175125719,8.51188356561025,30.0218578930308,11.9569704546617,0,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0.223676107892416,0,0,0,0,1.08182271390393,0.33307196799782,0,0,0,0,0,1.98895302764489,0,0,0,0,0.422008249231538,0,0,0,0,0.828851746593443,0.503865495708552,0.306806047506464,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,1.0241410345695,0,0.472775363535873,2.75794698593172,0,0.173624994933292,0,0.361789315876224,0,0,0,0.219385397153973,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,6.13159789174419,2.35470384592537,1.49590513710141,1.35357396370308,2.35275041181287,2.01385904371011,0,0.953619473882272,0,0,0.424059214301822,10.1702660678783,0,0.442287822516696,0,0.296521128680622,0.741383633679017,1.04421949505455,0.606610196826093,0,0.234264445725339,2.00700268137233,0.19566461893209,0.242780379534093,0,1.20990716048664,0,0.189559738885464,0.751617097072463,1.34794648816421,0,0,0.941798755221676,0,0,0,0,0,0,0.17472666824203,0,0,0,0,1.26085721434945,0,0,0.548167698587004,0.397429223405979,0.189932387867636,0.195551382734803,0.0801588202515337,0.213452994739353,0.19980960958213,0.144090417154106,0.916292769327325,0,0,0.248505071130865,0,0.135904206073614,0.104602846312333,1.01998217636322,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0.0674035438541849,0,0,0,0.681017030557878,0,0,0,0,0,0.182248669974074,0,0.394028536495991,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0.656740165994712,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0,1.9846640872478,4.54506753365272,1.09613338542806,0.638341257770182,0,0,0,0,6.75332613876007,0,0.244052529803926,0.250381861413,0.573409195690071,0.110929051536852,0.807253238237985,0,0,1.51649117541648,2.56918800190471,0.235265819698172,0,1.88397337194073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.643324774124777,0.521988583930423,0,0,0,0.358177682162975,0.617602894321944,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0,2.23457967189298,0,13.9585288652218,0,0,0.3062454773532,0.321146125482298,0,0.159633859057151,0.205116364240755,0,0.553258019713743,0.161475645631851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| 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| ||
|short_description=p5@LEF1 | |||
}} | }} |
Latest revision as of 15:12, 24 September 2015
Short description: | p5@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LEF1_5end |
Coexpression cluster: | C1082_acute_CD4_thymus_small_non_chronic_lymphangiectasia |
Association with transcript: | 99bp_to_ENST00000379951, NM_001130713, NM_001130714, NM_016269_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | Q9UJU2Q659G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.23e-31 | 18 |
alpha-beta T cell | 1.23e-31 | 18 |
immature T cell | 1.23e-31 | 18 |
mature T cell | 1.23e-31 | 18 |
immature alpha-beta T cell | 1.23e-31 | 18 |
T cell | 4.49e-31 | 25 |
pro-T cell | 4.49e-31 | 25 |
CD8-positive, alpha-beta T cell | 1.55e-21 | 11 |
lymphocyte | 7.25e-21 | 53 |
common lymphoid progenitor | 7.25e-21 | 53 |
lymphoid lineage restricted progenitor cell | 1.15e-19 | 52 |
CD4-positive, alpha-beta T cell | 6.73e-14 | 6 |
nongranular leukocyte | 6.03e-08 | 115 |
naive T cell | 7.75e-08 | 3 |
hematopoietic stem cell | 2.18e-07 | 168 |
single nucleate cell | 3.51e-07 | 3 |
mononuclear cell | 3.51e-07 | 3 |
hematopoietic cell | 4.14e-07 | 177 |
leukocyte | 6.24e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 4.60e-17 | 15 |
haemolymphatic fluid | 4.60e-17 | 15 |
organism substance | 4.60e-17 | 15 |
hemopoietic organ | 8.19e-08 | 7 |
immune organ | 8.19e-08 | 7 |