FFCP PHASE1:Hg19::chr4:57898713..57898727,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:57898713..57898727,- to FFCP PHASE1:Hg19::chr4:57898713..57898727,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:57898713..57898727,- | |||
|coexpression_cluster_id=C772 | |||
|description=CAGE_peak_at_chr4:57898713..57898727,- | |||
|id=chr4:57898713..57898727,- | |||
|ontology_enrichment_celltype=CL:0000055!1.49e-17!180;CL:0000222!2.42e-15!119;CL:0000183!8.33e-11!59;CL:0000680!2.41e-10!57;CL:0000056!2.41e-10!57;CL:0000355!2.41e-10!57;CL:0000220!2.80e-10!246;CL:0000192!2.89e-10!42;CL:0000514!2.89e-10!42;CL:0002321!8.09e-10!248;CL:0000359!1.03e-09!32;CL:0000057!1.24e-09!75;CL:0000187!1.52e-09!54;CL:0000393!3.95e-07!60;CL:0000211!3.95e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.60e-11;32!CL:0000192;3.45e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.41e-12,121;CL:0000359,3.10e-11,32;CL:0000192,2.77e-10,43;CL:0000514,2.77e-10,43;CL:0000680,3.40e-09,58;CL:0000056,3.40e-09,58;CL:0000355,3.40e-09,58;CL:0000187,1.02e-08,55;CL:0000057,5.73e-08,76;CL:0002321,3.45e-07,250;CL:0000393,7.94e-07,61;CL:0000211,7.94e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;3.45e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!5.31e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.44e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.38e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!7.53e-17!79;UBERON:0007798!7.53e-17!79;UBERON:0004872!4.91e-16!84;UBERON:0003914!3.02e-15!118;UBERON:0000055!1.32e-14!69;UBERON:0001009!1.98e-14!113;UBERON:0004535!7.10e-14!110;UBERON:0000477!9.09e-14!286;UBERON:0001981!2.94e-13!60;UBERON:0007500!2.94e-13!60;UBERON:0004537!2.94e-13!60;UBERON:0006965!2.94e-13!60;UBERON:0000475!2.66e-12!365;UBERON:0000481!3.72e-12!347;UBERON:0000119!5.95e-12!312;UBERON:0000483!9.79e-12!309;UBERON:0001637!1.53e-11!42;UBERON:0003509!1.53e-11!42;UBERON:0004572!1.53e-11!42;UBERON:0004111!3.11e-11!241;UBERON:0003103!1.65e-10!69;UBERON:0002100!5.11e-10!216;UBERON:0002385!8.58e-10!63;UBERON:0001015!8.58e-10!63;UBERON:0000383!8.58e-10!63;UBERON:0000468!8.60e-10!659;UBERON:0004573!9.04e-10!33;UBERON:0004571!9.04e-10!33;UBERON:0005256!1.12e-09!143;UBERON:0001134!1.41e-09!61;UBERON:0002036!1.41e-09!61;UBERON:0003082!1.41e-09!61;UBERON:0000467!8.25e-09!625;UBERON:0000480!1.23e-08!626;UBERON:0000025!1.30e-08!194;UBERON:0000490!1.38e-08!138;UBERON:0000486!1.57e-08!82;UBERON:0000914!2.06e-08!83;UBERON:0002329!2.06e-08!83;UBERON:0003077!2.06e-08!83;UBERON:0003059!2.06e-08!83;UBERON:0007282!2.06e-08!83;UBERON:0009618!2.06e-08!83;UBERON:0007285!2.06e-08!83;UBERON:0004290!2.14e-08!70;UBERON:0003104!3.00e-07!238;UBERON:0009142!3.00e-07!238;UBERON:0007100!3.91e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.19e-09;33!UBERON:0004571;1.19e-09;33!UBERON:0001637;4.36e-09;42!UBERON:0003509;4.36e-09;42!UBERON:0004572;4.36e-09;42!UBERON:0007100;8.41e-08;25!UBERON:0000948;9.56e-08;22!UBERON:0003688;6.28e-07;6!UBERON:0002358;6.28e-07;6!UBERON:0003684;6.28e-07;6!UBERON:0001178;6.28e-07;6!UBERON:0000947;6.88e-07;21!UBERON:0010191;6.88e-07;21 | |||
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| ||
|short_description=p@chr4:57898713..57898727,- | |||
}} | }} |
Latest revision as of 05:53, 30 July 2015
Short description: | p@chr4:57898713..57898727, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:57898713..57898727, - |
Coexpression cluster: | C772_Smooth_Fibroblast_Adipocyte_Preadipocyte_hepatic_Renal_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.41e-12 | 121 |
vascular associated smooth muscle cell | 3.10e-11 | 32 |
smooth muscle cell | 2.77e-10 | 43 |
smooth muscle myoblast | 2.77e-10 | 43 |
muscle precursor cell | 3.40e-09 | 58 |
myoblast | 3.40e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.40e-09 | 58 |
muscle cell | 1.02e-08 | 55 |
fibroblast | 5.73e-08 | 76 |
embryonic cell | 3.45e-07 | 250 |
electrically responsive cell | 7.94e-07 | 61 |
electrically active cell | 7.94e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.38e-10 | 14 |