FFCP PHASE1:Hg19::chr4:57976544..57976560,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:57976544..57976560,- to FFCP PHASE1:Hg19::chr4:57976544..57976560,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3490 | |EntrezGene=3490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5476 | |HGNC=5476 | ||
|TSSclassifier=strong | |||
|UniProt=Q16270,B4E1N2 | |UniProt=Q16270,B4E1N2 | ||
|association_with_transcript=0bp_to_ENST00000295666,ENST00000537922,NM_001253835,NM_001553_5end | |||
|cluster_id=chr4:57976544..57976560,- | |||
|coexpression_cluster_id=C772 | |||
|description=CAGE_peak_1_at_IGFBP7_5end | |||
|id=chr4:57976544..57976560,- | |||
|ontology_enrichment_celltype=CL:0000055!8.81e-19!180;CL:0000222!2.23e-18!119;CL:0000183!3.76e-13!59;CL:0000220!1.57e-12!246;CL:0002321!6.11e-12!248;CL:0000192!9.76e-12!42;CL:0000514!9.76e-12!42;CL:0000359!1.08e-11!32;CL:0000680!2.67e-11!57;CL:0000056!2.67e-11!57;CL:0000355!2.67e-11!57;CL:0000187!4.03e-11!54;CL:0000057!1.18e-10!75;CL:0000393!1.36e-08!60;CL:0000211!1.36e-08!60;CL:0002494!3.96e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.02e-11;32!CL:0000192;3.32e-08;43!CL:1000497;3.35e-07;17!CL:0002518;3.35e-07;17!CL:1000449;3.37e-07;15!CL:0002494;3.89e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.20e-18,121;CL:0002321,4.20e-12,250;CL:0000359,1.05e-11,32;CL:0000192,2.55e-11,43;CL:0000514,2.55e-11,43;CL:0000057,3.43e-11,76;CL:0000680,5.57e-11,58;CL:0000056,5.57e-11,58;CL:0000355,5.57e-11,58;CL:0000187,8.58e-11,55;CL:0000393,2.38e-08,61;CL:0000211,2.38e-08,61;CL:1000497,3.34e-07,17;CL:0002518,3.34e-07,17;CL:1000449,3.37e-07,15;CL:0002494,3.89e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;3.32e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!1.73e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.70e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.70e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!5.95e-22!79;UBERON:0007798!5.95e-22!79;UBERON:0003914!1.11e-21!118;UBERON:0004872!2.68e-21!84;UBERON:0000055!5.02e-19!69;UBERON:0001009!6.99e-19!113;UBERON:0004535!2.24e-18!110;UBERON:0000477!2.66e-18!286;UBERON:0001981!2.87e-17!60;UBERON:0007500!2.87e-17!60;UBERON:0004537!2.87e-17!60;UBERON:0006965!2.87e-17!60;UBERON:0004111!3.29e-15!241;UBERON:0000119!8.09e-15!312;UBERON:0000483!2.53e-14!309;UBERON:0001637!5.50e-14!42;UBERON:0003509!5.50e-14!42;UBERON:0004572!5.50e-14!42;UBERON:0000468!6.33e-14!659;UBERON:0000467!1.71e-13!625;UBERON:0000475!2.31e-13!365;UBERON:0000481!2.36e-13!347;UBERON:0000480!3.79e-13!626;UBERON:0005256!7.70e-13!143;UBERON:0003103!2.19e-12!69;UBERON:0000025!7.24e-12!194;UBERON:0002385!2.28e-11!63;UBERON:0001015!2.28e-11!63;UBERON:0000383!2.28e-11!63;UBERON:0004573!2.57e-11!33;UBERON:0004571!2.57e-11!33;UBERON:0001134!3.46e-11!61;UBERON:0002036!3.46e-11!61;UBERON:0003082!3.46e-11!61;UBERON:0000914!1.42e-10!83;UBERON:0002329!1.42e-10!83;UBERON:0003077!1.42e-10!83;UBERON:0003059!1.42e-10!83;UBERON:0007282!1.42e-10!83;UBERON:0009618!1.42e-10!83;UBERON:0007285!1.42e-10!83;UBERON:0000486!1.87e-10!82;UBERON:0002100!2.65e-10!216;UBERON:0007100!3.69e-10!27;UBERON:0000948!7.46e-10!24;UBERON:0005498!7.46e-10!24;UBERON:0004140!7.46e-10!24;UBERON:0009881!7.46e-10!24;UBERON:0004141!7.46e-10!24;UBERON:0003084!7.46e-10!24;UBERON:0007005!7.46e-10!24;UBERON:0004139!7.46e-10!24;UBERON:0004291!7.46e-10!24;UBERON:0000490!1.11e-09!138;UBERON:0004290!1.44e-09!70;UBERON:0003104!1.92e-08!238;UBERON:0009142!1.92e-08!238;UBERON:0003886!2.82e-08!63;UBERON:0004876!3.32e-08!20;UBERON:0002050!7.08e-08!605;UBERON:0005423!7.08e-08!605;UBERON:0000923!8.84e-08!604;UBERON:0005291!8.84e-08!604;UBERON:0006598!8.84e-08!604;UBERON:0002532!8.84e-08!604;UBERON:0002553!2.12e-07!70;UBERON:0000922!2.79e-07!612;UBERON:0000080!2.87e-07!18;UBERON:0002120!2.87e-07!18;UBERON:0004875!2.87e-07!18;UBERON:0005721!2.87e-07!18;UBERON:0005754!2.87e-07!18;UBERON:0007297!2.87e-07!18;UBERON:0006555!4.95e-07!17;UBERON:0005103!4.95e-07!17;UBERON:0000083!4.95e-07!17;UBERON:0009201!4.95e-07!17;UBERON:0004819!4.95e-07!17;UBERON:0006553!4.95e-07!17;UBERON:0003074!4.95e-07!17;UBERON:0003060!4.95e-07!17;UBERON:0000947!8.59e-07!21;UBERON:0010191!8.59e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.83e-10;42!UBERON:0003509;1.83e-10;42!UBERON:0004572;1.83e-10;42!UBERON:0004573;2.49e-10;33!UBERON:0004571;2.49e-10;33!UBERON:0007100;1.53e-09;25!UBERON:0000948;3.05e-09;22!UBERON:0003914;1.23e-08;74!UBERON:0000055;1.25e-08;65!UBERON:0002049;1.36e-08;75!UBERON:0007798;1.36e-08;75!UBERON:0007500;2.69e-08;56!UBERON:0001981;2.69e-08;56!UBERON:0004537;2.69e-08;56!UBERON:0006555;3.37e-07;15!UBERON:0004819;3.37e-07;15!UBERON:0001285;3.37e-07;15!UBERON:0007684;3.37e-07;15!UBERON:0000947;8.43e-07;21!UBERON:0010191;8.43e-07;21 | |||
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| ||
|short_description=p1@IGFBP7 | |||
}} | }} |
Latest revision as of 03:48, 18 September 2015
Short description: | p1@IGFBP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGFBP7_5end |
Coexpression cluster: | C772_Smooth_Fibroblast_Adipocyte_Preadipocyte_hepatic_Renal_Osteoblast |
Association with transcript: | 0bp_to_ENST00000295666, ENST00000537922, NM_001253835, NM_001553_5end |
EntrezGene: | IGFBP7 |
HGNC: | 5476 |
UniProt: | Q16270B4E1N2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.20e-18 | 121 |
embryonic cell | 4.20e-12 | 250 |
vascular associated smooth muscle cell | 1.05e-11 | 32 |
smooth muscle cell | 2.55e-11 | 43 |
smooth muscle myoblast | 2.55e-11 | 43 |
fibroblast | 3.43e-11 | 76 |
muscle precursor cell | 5.57e-11 | 58 |
myoblast | 5.57e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.57e-11 | 58 |
muscle cell | 8.58e-11 | 55 |
electrically responsive cell | 2.38e-08 | 61 |
electrically active cell | 2.38e-08 | 61 |
kidney cell | 3.34e-07 | 17 |
kidney epithelial cell | 3.34e-07 | 17 |
epithelial cell of nephron | 3.37e-07 | 15 |
cardiocyte | 3.89e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.70e-07 | 14 |