FFCP PHASE1:Hg19::chr6:6588974..6589011,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:6588974..6589011,+ to FFCP PHASE1:Hg19::chr6:6588974..6589011,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9450 | |EntrezGene=9450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16837 | |HGNC=16837 | ||
|TSSclassifier=strong | |||
|UniProt=A3KLP2 | |UniProt=A3KLP2 | ||
|association_with_transcript=6bp_to_AY931019_5end | |||
|cluster_id=chr6:6588974..6589011,+ | |||
|coexpression_cluster_id=C691 | |||
|description=CAGE_peak_2_at_LY86_5end | |||
|id=chr6:6588974..6589011,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.11e-56!119;CL:0000738!4.49e-55!140;CL:0000037!6.60e-53!172;CL:0000566!6.60e-53!172;CL:0002031!2.77e-51!124;CL:0002032!2.06e-49!165;CL:0000837!2.06e-49!165;CL:0000988!2.59e-47!182;CL:0002009!2.76e-43!65;CL:0002194!8.92e-42!63;CL:0000576!8.92e-42!63;CL:0000040!8.92e-42!63;CL:0000559!8.92e-42!63;CL:0000557!1.76e-39!71;CL:0000766!4.05e-38!76;CL:0000839!4.44e-37!70;CL:0002057!4.31e-36!42;CL:0000763!1.23e-33!112;CL:0000049!1.23e-33!112;CL:0000860!2.35e-32!45;CL:0000945!7.80e-19!24;CL:0000826!7.80e-19!24;CL:0000542!1.25e-13!53;CL:0000051!1.25e-13!53;CL:0000236!3.71e-13!14;CL:0000838!5.51e-13!52;CL:0002393!2.76e-09!9;CL:0002397!2.76e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.13e-30;39!CL:0000234;3.13e-30;39!CL:0000576;6.61e-30;48!CL:0000860;1.18e-29;33!CL:0002057;1.18e-29;33!CL:0000945;7.88e-22;24!CL:0000766;1.76e-20;69!CL:0002087;1.17e-17;104!CL:0000236;1.92e-14;13!CL:0000738;8.81e-14;136!CL:0000763;5.83e-13;100!CL:0000988;3.97e-09;177!CL:0000235;5.58e-08;6!CL:0002393;7.60e-08;6!CL:0002397;7.60e-08;6!CL:0000542;3.77e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.52e-63,115;CL:0000738,6.49e-60,136;CL:0000037,3.98e-57,168;CL:0002031,5.05e-56,120;CL:0002009,6.58e-56,61;CL:0002194,3.90e-54,59;CL:0000576,3.90e-54,59;CL:0000040,3.90e-54,59;CL:0000559,3.90e-54,59;CL:0002032,4.71e-53,161;CL:0000837,4.71e-53,161;CL:0000988,3.93e-52,177;CL:0000557,9.89e-49,67;CL:0000473,1.43e-48,48;CL:0000234,1.43e-48,48;CL:0000766,3.48e-47,72;CL:0000839,6.56e-46,66;CL:0000860,7.46e-42,42;CL:0002057,7.46e-42,42;CL:0000763,1.02e-39,108;CL:0000049,1.02e-39,108;CL:0000945,7.95e-22,24;CL:0000826,7.95e-22,24;CL:0000236,4.44e-15,14;CL:0000542,8.74e-12,53;CL:0000051,8.74e-12,53;CL:0000838,4.10e-11,52;CL:0002393,1.44e-10,9;CL:0002397,1.44e-10,9;CL:0000134,2.31e-09,354;CL:0002320,1.27e-08,361;CL:0000235,5.63e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.38e-30;42!CL:0000049;2.36e-11;108!CL:0000051;3.77e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.93e-41!102;UBERON:0003061!8.93e-41!102;UBERON:0002193!1.08e-36!112;UBERON:0007023!2.79e-34!115;UBERON:0002371!1.78e-33!80;UBERON:0001474!2.68e-29!86;UBERON:0002405!6.49e-25!115;UBERON:0004765!8.83e-23!101;UBERON:0001434!8.83e-23!101;UBERON:0001049!1.01e-13!57;UBERON:0005068!1.01e-13!57;UBERON:0006241!1.01e-13!57;UBERON:0007135!1.01e-13!57;UBERON:0002780!1.94e-11!41;UBERON:0001890!1.94e-11!41;UBERON:0006240!1.94e-11!41;UBERON:0003080!6.29e-11!42;UBERON:0001893!1.79e-10!34;UBERON:0003081!1.87e-10!216;UBERON:0002020!1.98e-10!34;UBERON:0003528!1.98e-10!34;UBERON:0002616!3.17e-10!59;UBERON:0002791!4.52e-10!33;UBERON:0001869!2.19e-09!32;UBERON:0001950!1.94e-08!20;UBERON:0002619!2.73e-08!22;UBERON:0001017!3.32e-08!82;UBERON:0002204!3.89e-08!167;UBERON:0000955!4.67e-08!69;UBERON:0006238!4.67e-08!69;UBERON:0005743!9.92e-08!86;UBERON:0003075!3.17e-07!86;UBERON:0007284!3.17e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.65e-07;15!UBERON:0000179;1.65e-07;15!UBERON:0000463;1.65e-07;15!UBERON:0001893;2.79e-07;34!UBERON:0003528;5.21e-07;34!UBERON:0002020;5.21e-07;34!UBERON:0002780;7.53e-07;41!UBERON:0001890;7.53e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.09e-50,98;UBERON:0003061,1.09e-50,98;UBERON:0002193,3.70e-46,108;UBERON:0002371,8.18e-42,76;UBERON:0002405,4.68e-39,93;UBERON:0001474,5.28e-37,82;UBERON:0004765,1.25e-31,90;UBERON:0001434,3.33e-27,100;UBERON:0007023,7.39e-22,114;UBERON:0003081,1.18e-14,203;UBERON:0001049,6.45e-12,56;UBERON:0005068,6.45e-12,56;UBERON:0006241,6.45e-12,56;UBERON:0007135,6.45e-12,56;UBERON:0000073,2.06e-10,53;UBERON:0002616,2.06e-10,53;UBERON:0002204,6.23e-10,167;UBERON:0002780,4.23e-09,41;UBERON:0001890,4.23e-09,41;UBERON:0003080,4.23e-09,41;UBERON:0006240,4.23e-09,41;UBERON:0001893,1.92e-08,34;UBERON:0003528,2.11e-08,34;UBERON:0002020,2.11e-08,34;UBERON:0002384,5.75e-08,371;UBERON:0001017,1.14e-07,81;UBERON:0000178,1.59e-07,15;UBERON:0000179,1.59e-07,15;UBERON:0000463,1.59e-07,15;UBERON:0002791,1.91e-07,32;UBERON:0001869,2.50e-07,32;UBERON:0000955,4.04e-07,68;UBERON:0006238,4.04e-07,68;UBERON:0000479,4.46e-07,773 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,32.934177877367,30.0488157386801,24.4790529885542,25.9620422720277,16.8884935162774,38.5492147057029,0,0,0,10.3806048777604,7.96147701929561,15.5608232847469,32.6857291033808,27.8756781983497,22.3521196837327,56.4266995084609,60.5681155455492,45.0757243359826,25.5900900252034,25.695564170839,21.5899814457156,18.3618939155491,20.5583944010913,21.6794459626573,21.5769294241613,27.921517011672,33.3439944142905,28.2691458204027,30.9832648120237,43.3364757101894,23.342050103283,23.4699289049747,25.3937537422946,29.9962214523485,33.0556897888376,14.0654167675789,12.2044981069085,22.9383206264877,18.7538890234385,28.1502961469727,14.7520158419696,16.1933784738849,23.8686231993906,25.5526630025899,33.6642709292931,16.9511860737343,32.7767096028933,32.912088293852,58.7289695947198,52.0880534914357,56.8174929327699,79.0793563271326,83.948883098402,42.4315548880292,30.7813763240548,25.0635013270854,19.5450644528158,36.9592113368778,42.5988116784463,48.033499708632,57.6085800464785,52.0514783146816,49.4287098360856,37.0185128759523,30.5297201451317,27.3222225172535,20.5533016279829,26.759125968766,3.96513985737078,8.40762844472304,12.6424360692037,0,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0.289803085735052,0.444859689486181,1.33770414044857,1.04535523804977,0,0,0.34362744548263,0,1.59282707162048,0,0,4.66782869141096,2.43174561193395,1.24930726552346,2.60454977248419,1.64225599384209,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,2.42311289670768,0,0,8.43823223502177,6.79105975467142,10.7695948020281,5.00830311041218,6.86393892936153,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,77.8045739236176,16.8483070900251,35.2255854624286,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.8118903205952,76.8453349891153,40.058448501776,0,0,0,0,0,0,0,2.56139988262505,0.215627574859517,1.66845947163673,0,0,0,1.84267891867784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9549781420768,15.747136659759,13.6611273988409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.03558180854457,0,0,0,0,5.07447609232169,5.35246044999663,10.2536493691349,11.6733569974317,20.9794759273959,10.3755729790835,12.4207230564766,12.6900028207083,0,0,0,25.6408381673492,9.81030648239825,0,0,6.98527800014858,3.83010740264733,8.89029047440308,0.973865820823666,1.12318871245384,55.9174963631321,0,0,0.50787533340481,19.4311570875476,37.5347455375348,37.900315154439,4.46556948182494,8.29550063632837,7.38131156044973,4.50492682622153,19.9295857310081,0,0,0,0,0,0,3.51619630252546,0,0.111443384277478,0,0,1.18785872333055,0,0.994147647766298,6.47079315488359,0,0,0,1.39473591775749,11.6039244523082,0,0,22.4014345939146,0,0,0,30.1827698433854,1.08507746200627,11.974154617347,0,2.90799823828566,5.47331779154922,0,0,0,0,0,0,0,0,0,0,1.77148277162768,3.85908603601305,0,0.442317039724898,1.77328571372128,2.19385397153973,0,0,0.923403102045565,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.884575645033392,1.83309043480088,0,0,0,13.0084186652707,1.60515529459758,7.26219781748551,19.3402076568606,0,0,0.394584402849391,4.83962864194656,0.30607276163049,6.63459086099124,0.150323419414493,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,1.16386819786103,0,1.80784592624426,0,0,3.54540457352921,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,8.62503887019556,0,0,0,0.837847203816763,0.229160424011684,0,0.199679000498991,0,0,0.873385142327441,0,0,0,0,0,0,17.0193397452227,0,6.26535668113248,0,0,0,12.598537926884,21.6664547276226,4.85996453264197,0,1.18208560948797,0.577000469484979,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0,0.58620893471233,2.65013777824443,3.23207390903876,7.27279309584795,0,0,3.63077202730162,3.14408610199332,4.14239055347196,12.4041505452988,0.395223263795889,39.3390092770294,0,0.544017803369474,0,0,0,0,0.886068179966986,1.09823638411767,3.8809188519015,2.86704597845036,7.09945929835855,9.06607482944198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28601152070365,0.194860308839388,0,0,0,0,0,0,24.0056391811817,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,4.43181653165571,0,3.67157875831448,2.66651273512982,0.756215088665154,2.97376185596137,3.55246420390072,1.42769420259154,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0,0,2.76904096935418,2.34323429584154,4.13373593002368,2.02930592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| ||
|short_description=p2@LY86 | |||
}} | }} |
Latest revision as of 13:17, 19 September 2015
Short description: | p2@LY86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LY86_5end |
Coexpression cluster: | C691_Monocytederived_CD14_Macrophage_CD19_Dendritic_immature_Whole |
Association with transcript: | 6bp_to_AY931019_5end |
EntrezGene: | LY86 |
HGNC: | 16837 |
UniProt: | A3KLP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.09e-50 | 98 |
blood island | 1.09e-50 | 98 |
hemolymphoid system | 3.70e-46 | 108 |
bone marrow | 8.18e-42 | 76 |
immune system | 4.68e-39 | 93 |
bone element | 5.28e-37 | 82 |
skeletal element | 1.25e-31 | 90 |
skeletal system | 3.33e-27 | 100 |
adult organism | 7.39e-22 | 114 |
lateral plate mesoderm | 1.18e-14 | 203 |
neural tube | 6.45e-12 | 56 |
neural rod | 6.45e-12 | 56 |
future spinal cord | 6.45e-12 | 56 |
neural keel | 6.45e-12 | 56 |
regional part of nervous system | 2.06e-10 | 53 |
regional part of brain | 2.06e-10 | 53 |
musculoskeletal system | 6.23e-10 | 167 |
regional part of forebrain | 4.23e-09 | 41 |
forebrain | 4.23e-09 | 41 |
anterior neural tube | 4.23e-09 | 41 |
future forebrain | 4.23e-09 | 41 |
telencephalon | 1.92e-08 | 34 |
brain grey matter | 2.11e-08 | 34 |
gray matter | 2.11e-08 | 34 |
connective tissue | 5.75e-08 | 371 |
central nervous system | 1.14e-07 | 81 |
blood | 1.59e-07 | 15 |
haemolymphatic fluid | 1.59e-07 | 15 |
organism substance | 1.59e-07 | 15 |
regional part of telencephalon | 1.91e-07 | 32 |
cerebral hemisphere | 2.50e-07 | 32 |
brain | 4.04e-07 | 68 |
future brain | 4.04e-07 | 68 |
tissue | 4.46e-07 | 773 |