FFCP PHASE1:Hg19::chr7:138915971..138916005,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:138915971..138916005,+ to FFCP PHASE1:Hg19::chr7:138915971..138916005,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=254048 | |EntrezGene=254048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21931 | |HGNC=21931 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZU65 | |UniProt=Q6ZU65 | ||
|association_with_transcript=-225bp_to_ENST00000288561,ENST00000473989,NM_173569,uc011kqr.1_5end | |||
|cluster_id=chr7:138915971..138916005,+ | |||
|description=CAGE_peak_1_at_UBN2_5end | |||
|id=chr7:138915971..138916005,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.30e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.98e-43!115;UBERON:0001049!2.98e-24!57;UBERON:0005068!2.98e-24!57;UBERON:0006241!2.98e-24!57;UBERON:0007135!2.98e-24!57;UBERON:0001017!1.82e-20!82;UBERON:0003080!5.05e-20!42;UBERON:0002616!1.32e-19!59;UBERON:0002780!1.41e-19!41;UBERON:0001890!1.41e-19!41;UBERON:0006240!1.41e-19!41;UBERON:0000955!2.62e-19!69;UBERON:0006238!2.62e-19!69;UBERON:0005743!7.52e-19!86;UBERON:0000073!1.85e-18!94;UBERON:0001016!1.85e-18!94;UBERON:0002346!5.91e-16!90;UBERON:0002020!8.24e-16!34;UBERON:0003528!8.24e-16!34;UBERON:0001893!1.26e-15!34;UBERON:0003075!1.30e-15!86;UBERON:0007284!1.30e-15!86;UBERON:0002791!3.37e-15!33;UBERON:0001869!1.49e-14!32;UBERON:0002619!4.49e-13!22;UBERON:0001950!7.25e-12!20;UBERON:0003056!2.58e-11!61;UBERON:0000956!6.86e-11!25;UBERON:0000203!6.86e-11!25;UBERON:0000924!2.20e-09!173;UBERON:0006601!2.20e-09!173;UBERON:0000153!4.68e-09!129;UBERON:0007811!4.68e-09!129;UBERON:0004121!5.17e-09!169;UBERON:0000033!4.14e-08!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.71e-14;41!UBERON:0001890;1.71e-14;41!UBERON:0003528;1.96e-13;34!UBERON:0002020;1.96e-13;34!UBERON:0002791;2.41e-13;32!UBERON:0000073;2.52e-13;53!UBERON:0002616;2.52e-13;53!UBERON:0001893;2.63e-13;34!UBERON:0002619;3.38e-13;22!UBERON:0001869;3.45e-13;32!UBERON:0001950;5.66e-12;20!UBERON:0007023;5.76e-12;114!UBERON:0000956;5.85e-11;25!UBERON:0000203;5.85e-11;25!UBERON:0000955;9.90e-10;68!UBERON:0001017;5.28e-09;75!UBERON:0001016;1.43e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.28e-42,114;UBERON:0001049,8.55e-24,56;UBERON:0005068,8.55e-24,56;UBERON:0006241,8.55e-24,56;UBERON:0007135,8.55e-24,56;UBERON:0000073,2.65e-22,53;UBERON:0002616,2.65e-22,53;UBERON:0001017,4.88e-20,81;UBERON:0002780,1.41e-19,41;UBERON:0001890,1.41e-19,41;UBERON:0003080,1.41e-19,41;UBERON:0006240,1.41e-19,41;UBERON:0001016,1.64e-19,89;UBERON:0000955,7.08e-19,68;UBERON:0006238,7.08e-19,68;UBERON:0003528,8.23e-16,34;UBERON:0002020,8.23e-16,34;UBERON:0001893,1.26e-15,34;UBERON:0002346,2.64e-15,86;UBERON:0003075,5.76e-15,82;UBERON:0007284,5.76e-15,82;UBERON:0002791,1.06e-14,32;UBERON:0001869,1.49e-14,32;UBERON:0002619,4.49e-13,22;UBERON:0001950,7.25e-12,20;UBERON:0003056,2.31e-11,61;UBERON:0011216,6.11e-11,223;UBERON:0000956,6.86e-11,25;UBERON:0000203,6.86e-11,25;UBERON:0010371,2.72e-09,104;UBERON:0004121,7.62e-09,171;UBERON:0000924,7.62e-09,171;UBERON:0006601,7.62e-09,171 | |||
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| ||
|short_description=p1@UBN2 | |||
}} | }} |
Latest revision as of 15:56, 16 September 2015
Short description: | p1@UBN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -225bp_to_ENST00000288561, ENST00000473989, NM_173569, uc011kqr.1_5end |
EntrezGene: | UBN2 |
HGNC: | 21931 |
UniProt: | Q6ZU65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.28e-42 | 114 |
neural tube | 8.55e-24 | 56 |
neural rod | 8.55e-24 | 56 |
future spinal cord | 8.55e-24 | 56 |
neural keel | 8.55e-24 | 56 |
regional part of nervous system | 2.65e-22 | 53 |
regional part of brain | 2.65e-22 | 53 |
central nervous system | 4.88e-20 | 81 |
regional part of forebrain | 1.41e-19 | 41 |
forebrain | 1.41e-19 | 41 |
anterior neural tube | 1.41e-19 | 41 |
future forebrain | 1.41e-19 | 41 |
nervous system | 1.64e-19 | 89 |
brain | 7.08e-19 | 68 |
future brain | 7.08e-19 | 68 |
brain grey matter | 8.23e-16 | 34 |
gray matter | 8.23e-16 | 34 |
telencephalon | 1.26e-15 | 34 |
neurectoderm | 2.64e-15 | 86 |
neural plate | 5.76e-15 | 82 |
presumptive neural plate | 5.76e-15 | 82 |
regional part of telencephalon | 1.06e-14 | 32 |
cerebral hemisphere | 1.49e-14 | 32 |
regional part of cerebral cortex | 4.49e-13 | 22 |
neocortex | 7.25e-12 | 20 |
pre-chordal neural plate | 2.31e-11 | 61 |
organ system subdivision | 6.11e-11 | 223 |
cerebral cortex | 6.86e-11 | 25 |
pallium | 6.86e-11 | 25 |
ecto-epithelium | 2.72e-09 | 104 |
ectoderm-derived structure | 7.62e-09 | 171 |
ectoderm | 7.62e-09 | 171 |
presumptive ectoderm | 7.62e-09 | 171 |