FFCP PHASE1:Hg19::chr7:6570789..6570800,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:6570789..6570800,- to FFCP PHASE1:Hg19::chr7:6570789..6570800,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=392862 | |EntrezGene=392862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18464 | |HGNC=18464 | ||
|TSSclassifier=strong | |||
|UniProt=C9JNS8 | |UniProt=C9JNS8 | ||
|association_with_transcript=16bp_to_ENST00000435185_5end | |||
|cluster_id=chr7:6570789..6570800,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_4_at_GRID2IP_5end | |||
|id=chr7:6570789..6570800,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.28e-53;3!UBERON:0010122;6.30e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.86e-24!57;UBERON:0005068!4.86e-24!57;UBERON:0006241!4.86e-24!57;UBERON:0007135!4.86e-24!57;UBERON:0002616!1.17e-20!59;UBERON:0002780!8.14e-19!41;UBERON:0001890!8.14e-19!41;UBERON:0006240!8.14e-19!41;UBERON:0003080!2.70e-18!42;UBERON:0003075!7.68e-18!86;UBERON:0007284!7.68e-18!86;UBERON:0001017!7.64e-17!82;UBERON:0002346!8.06e-17!90;UBERON:0000955!9.78e-17!69;UBERON:0006238!9.78e-17!69;UBERON:0007023!1.90e-16!115;UBERON:0005743!7.62e-16!86;UBERON:0001893!2.06e-14!34;UBERON:0000073!6.66e-14!94;UBERON:0001016!6.66e-14!94;UBERON:0003056!2.37e-13!61;UBERON:0001869!7.78e-13!32;UBERON:0002791!1.62e-12!33;UBERON:0000153!3.70e-11!129;UBERON:0007811!3.70e-11!129;UBERON:0000369!5.38e-10!4;UBERON:0002435!5.38e-10!4;UBERON:0000204!5.38e-10!4;UBERON:0010082!5.38e-10!4;UBERON:0002020!6.81e-10!34;UBERON:0003528!6.81e-10!34;UBERON:0001897!1.24e-09!2;UBERON:0000033!1.25e-09!123;UBERON:0001950!1.01e-08!20;UBERON:0002619!7.05e-08!22;UBERON:0001872!7.91e-08!5;UBERON:0004121!2.72e-07!169;UBERON:0000025!2.99e-07!194;UBERON:0000924!5.19e-07!173;UBERON:0006601!5.19e-07!173;UBERON:0003076!5.94e-07!15;UBERON:0003057!5.94e-07!15;UBERON:0000956!7.40e-07!25;UBERON:0000203!7.40e-07!25;UBERON:0005383!9.77e-07!3;UBERON:0005382!9.77e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.82e-27;6!UBERON:0001897;4.66e-21;2!UBERON:0010225;4.66e-21;2!UBERON:0001873;6.30e-21;2!UBERON:0002680;1.03e-18;9!UBERON:0001895;1.03e-18;9!UBERON:0005383;1.96e-14;3!UBERON:0005382;1.96e-14;3!UBERON:0004733;2.57e-14;12!UBERON:0002028;2.57e-14;12!UBERON:0004732;2.68e-13;13!UBERON:0002784;3.10e-11;4!UBERON:0000369;3.60e-11;4!UBERON:0002435;3.60e-11;4!UBERON:0000204;3.60e-11;4!UBERON:0000073;4.46e-08;53!UBERON:0002616;4.46e-08;53!UBERON:0001894;5.70e-07;7!UBERON:0009663;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.82e-27,6;UBERON:0006215,1.82e-27,6;UBERON:0001897,4.66e-21,2;UBERON:0010225,4.66e-21,2;UBERON:0001873,6.96e-21,2;UBERON:0010122,6.96e-21,2;UBERON:0002680,1.03e-18,9;UBERON:0001895,1.03e-18,9;UBERON:0010092,1.03e-18,9;UBERON:0005383,2.09e-14,3;UBERON:0005382,2.09e-14,3;UBERON:0004733,2.57e-14,12;UBERON:0002028,2.57e-14,12;UBERON:0007277,2.57e-14,12;UBERON:0004732,2.68e-13,13;UBERON:0000073,1.98e-12,53;UBERON:0002616,1.98e-12,53;UBERON:0001049,8.22e-12,56;UBERON:0005068,8.22e-12,56;UBERON:0006241,8.22e-12,56;UBERON:0007135,8.22e-12,56;UBERON:0003076,1.15e-11,15;UBERON:0003057,1.15e-11,15;UBERON:0002784,3.10e-11,4;UBERON:0000369,3.79e-11,4;UBERON:0002435,3.79e-11,4;UBERON:0000204,3.79e-11,4;UBERON:0010082,3.79e-11,4;UBERON:0000955,9.66e-10,68;UBERON:0006238,9.66e-10,68;UBERON:0001017,2.59e-08,81;UBERON:0003075,2.59e-08,82;UBERON:0007284,2.59e-08,82;UBERON:0002346,5.87e-08,86;UBERON:0001016,1.48e-07,89;UBERON:0001894,5.70e-07,7;UBERON:0006222,5.70e-07,7;UBERON:0009663,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721346064882224,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,1.77148277162768,0,0,4.86548743697388,5.91095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630893960010027,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,0.263091094251396,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671132590786754,0,0,0,0,0,0,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0.250707539292375,0,0,2.48750831837634,0.20686599172379,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721346064882224,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,1.77148277162768,0,0,4.86548743697388,5.91095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630893960010027,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,0.263091094251396,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671132590786754,0,0,0,0,0,0,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0.250707539292375,0,0,2.48750831837634,0.20686599172379,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p4@GRID2IP | |||
}} | }} |
Latest revision as of 06:05, 19 September 2015
Short description: | p4@GRID2IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GRID2IP_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 16bp_to_ENST00000435185_5end |
EntrezGene: | GRID2IP |
HGNC: | 18464 |
UniProt: | C9JNS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data