FFCP PHASE1:Hg19::chr7:74072021..74072119,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:74072021..74072119,+ to FFCP PHASE1:Hg19::chr7:74072021..74072119,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2969 | |EntrezGene=2969 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4659 | |HGNC=4659 | ||
|TSSclassifier=strong | |||
|UniProt=B4DH52,P78347,Q499G6,Q86U51 | |UniProt=B4DH52,P78347,Q499G6,Q86U51 | ||
|association_with_transcript=0bp_to_ENST00000346152,ENST00000353920,ENST00000416070,ENST00000539339,NM_001163636,NM_001518,NM_032999,NM_033000,NM_033001,uc003uat.2,uc003uau.2,uc003uav.2,uc003uaw.2,uc003uax.2,uc003uay.2_5end | |||
|cluster_id=chr7:74072021..74072119,+ | |||
|description=CAGE_peak_1_at_GTF2I_5end | |||
|id=chr7:74072021..74072119,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.73e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.09e-26!86;UBERON:0000073!1.15e-26!94;UBERON:0001016!1.15e-26!94;UBERON:0001017!1.65e-26!82;UBERON:0000924!3.19e-23!173;UBERON:0006601!3.19e-23!173;UBERON:0004121!1.23e-22!169;UBERON:0000955!2.80e-22!69;UBERON:0006238!2.80e-22!69;UBERON:0001049!5.55e-22!57;UBERON:0005068!5.55e-22!57;UBERON:0006241!5.55e-22!57;UBERON:0007135!5.55e-22!57;UBERON:0000153!1.30e-20!129;UBERON:0007811!1.30e-20!129;UBERON:0002616!1.44e-20!59;UBERON:0002346!3.12e-20!90;UBERON:0000033!4.52e-20!123;UBERON:0003075!8.70e-20!86;UBERON:0007284!8.70e-20!86;UBERON:0003080!6.24e-19!42;UBERON:0002780!2.05e-18!41;UBERON:0001890!2.05e-18!41;UBERON:0006240!2.05e-18!41;UBERON:0007023!7.71e-17!115;UBERON:0003056!2.37e-16!61;UBERON:0001893!3.81e-15!34;UBERON:0002020!4.04e-15!34;UBERON:0003528!4.04e-15!34;UBERON:0002791!1.09e-14!33;UBERON:0001869!5.93e-14!32;UBERON:0000477!5.84e-11!286;UBERON:0000475!9.40e-11!365;UBERON:0000956!1.35e-10!25;UBERON:0000203!1.35e-10!25;UBERON:0002619!4.90e-10!22;UBERON:0004111!5.17e-10!241;UBERON:0001950!2.93e-09!20;UBERON:0000481!2.70e-08!347;UBERON:0000483!3.66e-08!309;UBERON:0000025!3.94e-08!194;UBERON:0000119!7.53e-08!312;UBERON:0000064!1.03e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.31e-13;41!UBERON:0001890;1.31e-13;41!UBERON:0003528;7.85e-13;34!UBERON:0002020;7.85e-13;34!UBERON:0001893;8.84e-13;34!UBERON:0002791;9.14e-13;32!UBERON:0001869;1.57e-12;32!UBERON:0000073;2.61e-12;53!UBERON:0002616;2.61e-12;53!UBERON:0000956;1.58e-10;25!UBERON:0000203;1.58e-10;25!UBERON:0000955;1.69e-10;68!UBERON:0002619;5.69e-10;22!UBERON:0001017;1.05e-09;75!UBERON:0001950;3.35e-09;20!UBERON:0001016;4.53e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.50e-26,81;UBERON:0001016,6.57e-26,89;UBERON:0011216,6.12e-25,223;UBERON:0004121,1.57e-22,171;UBERON:0000924,1.57e-22,171;UBERON:0006601,1.57e-22,171;UBERON:0000955,9.03e-22,68;UBERON:0006238,9.03e-22,68;UBERON:0001049,1.83e-21,56;UBERON:0005068,1.83e-21,56;UBERON:0006241,1.83e-21,56;UBERON:0007135,1.83e-21,56;UBERON:0000073,2.65e-20,53;UBERON:0002616,2.65e-20,53;UBERON:0002346,4.04e-20,86;UBERON:0003075,1.09e-19,82;UBERON:0007284,1.09e-19,82;UBERON:0002780,2.05e-18,41;UBERON:0001890,2.05e-18,41;UBERON:0003080,2.05e-18,41;UBERON:0006240,2.05e-18,41;UBERON:0003056,1.86e-16,61;UBERON:0007023,2.05e-16,114;UBERON:0001893,3.81e-15,34;UBERON:0003528,4.04e-15,34;UBERON:0002020,4.04e-15,34;UBERON:0010371,4.71e-15,104;UBERON:0002791,4.05e-14,32;UBERON:0001869,5.93e-14,32;UBERON:0010314,2.37e-13,132;UBERON:0000956,1.35e-10,25;UBERON:0000203,1.35e-10,25;UBERON:0002619,4.90e-10,22;UBERON:0004111,1.39e-09,240;UBERON:0001950,2.93e-09,20;UBERON:0000483,8.13e-08,306;UBERON:0000025,1.00e-07,192;UBERON:0000119,1.65e-07,309 | |||
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| ||
|short_description=p1@GTF2I | |||
}} | }} |
Latest revision as of 11:48, 19 September 2015
Short description: | p1@GTF2I |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GTF2I_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000346152, ENST00000353920, ENST00000416070, ENST00000539339, NM_001163636, NM_001518, NM_032999, NM_033000, NM_033001, uc003uat.2, uc003uau.2, uc003uav.2, uc003uaw.2, uc003uax.2, uc003uay.2_5end |
EntrezGene: | GTF2I |
HGNC: | 4659 |
UniProt: | B4DH52P78347Q499G6Q86U51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data