FFCP PHASE1:Hg19::chrX:119694334..119694362,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:119694334..119694362,- to FFCP PHASE1:Hg19::chrX:119694334..119694362,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8450 | |EntrezGene=8450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2555 | |HGNC=2555 | ||
|TSSclassifier=strong | |||
|UniProt=Q13620 | |UniProt=Q13620 | ||
|association_with_transcript=130bp_to_AY365125_5end | |||
|cluster_id=chrX:119694334..119694362,- | |||
|coexpression_cluster_id=C964 | |||
|description=CAGE_peak_5_at_CUL4B_5end | |||
|id=chrX:119694334..119694362,- | |||
|ontology_enrichment_celltype=CL:0000055!9.09e-30!180;CL:0000057!2.29e-19!75;CL:0000222!3.41e-19!119;CL:0000680!9.23e-15!57;CL:0000056!9.23e-15!57;CL:0000355!9.23e-15!57;CL:0000187!2.67e-13!54;CL:0000192!2.90e-11!42;CL:0000514!2.90e-11!42;CL:0000183!3.48e-11!59;CL:0000359!2.00e-10!32;CL:0000393!3.12e-10!60;CL:0000211!3.12e-10!60;CL:0002620!7.18e-10!23;CL:0000048!2.98e-09!430;CL:0000723!4.88e-08!436;CL:0000144!3.70e-07!625;CL:0000213!3.79e-07!57;CL:0000215!3.79e-07!57;CL:0000034!4.71e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.33e-10;32!CL:0002620;2.03e-09;23!CL:0000192;7.37e-09;43!CL:0000057;1.70e-08;73!CL:0000187;1.84e-08;55!CL:0000077;2.55e-07;19!CL:0000134;6.85e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.87e-21,121;CL:0000057,1.15e-19,76;CL:0000680,7.67e-16,58;CL:0000056,7.67e-16,58;CL:0000355,7.67e-16,58;CL:0000187,3.09e-14,55;CL:0000048,1.83e-12,427;CL:0000192,3.72e-12,43;CL:0000514,3.72e-12,43;CL:0000359,2.15e-11,32;CL:0000723,2.74e-11,433;CL:0000393,3.03e-11,61;CL:0000211,3.03e-11,61;CL:0000034,5.35e-10,441;CL:0002620,2.22e-09,23;CL:0000213,1.13e-07,58;CL:0000215,1.13e-07,58;CL:0000077,3.12e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;7.37e-09;43!CL:0000355;3.08e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!7.61e-18!110;UBERON:0001009!8.89e-17!113;UBERON:0000914!4.79e-15!83;UBERON:0002329!4.79e-15!83;UBERON:0003077!4.79e-15!83;UBERON:0003059!4.79e-15!83;UBERON:0007282!4.79e-15!83;UBERON:0009618!4.79e-15!83;UBERON:0007285!4.79e-15!83;UBERON:0004290!5.69e-14!70;UBERON:0002049!1.10e-13!79;UBERON:0007798!1.10e-13!79;UBERON:0001134!8.41e-13!61;UBERON:0002036!8.41e-13!61;UBERON:0003082!8.41e-13!61;UBERON:0000490!5.65e-12!138;UBERON:0002385!1.03e-11!63;UBERON:0001015!1.03e-11!63;UBERON:0000383!1.03e-11!63;UBERON:0004872!2.96e-11!84;UBERON:0001637!4.10e-11!42;UBERON:0003509!4.10e-11!42;UBERON:0004572!4.10e-11!42;UBERON:0000055!4.29e-11!69;UBERON:0000486!6.68e-11!82;UBERON:0001981!2.30e-10!60;UBERON:0007500!2.30e-10!60;UBERON:0004537!2.30e-10!60;UBERON:0006965!2.30e-10!60;UBERON:0004573!4.71e-10!33;UBERON:0004571!4.71e-10!33;UBERON:0005256!1.13e-09!143;UBERON:0003914!4.42e-09!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.03e-09;33!UBERON:0004571;1.03e-09;33!UBERON:0001637;2.60e-08;42!UBERON:0003509;2.60e-08;42!UBERON:0004572;2.60e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.32e-18,109;UBERON:0001009,2.24e-17,112;UBERON:0002049,2.46e-14,78;UBERON:0007798,2.46e-14,78;UBERON:0002329,2.74e-14,71;UBERON:0003059,2.74e-14,71;UBERON:0007282,2.74e-14,71;UBERON:0004290,2.74e-14,71;UBERON:0009618,2.74e-14,71;UBERON:0007524,6.73e-14,73;UBERON:0003077,9.68e-14,72;UBERON:0007285,9.68e-14,72;UBERON:0001134,9.69e-14,62;UBERON:0002036,9.69e-14,62;UBERON:0003082,9.69e-14,62;UBERON:0007503,2.80e-13,78;UBERON:0000490,6.98e-13,148;UBERON:0002385,1.33e-12,64;UBERON:0001015,1.33e-12,64;UBERON:0000383,1.33e-12,64;UBERON:0001637,9.45e-12,42;UBERON:0003509,9.45e-12,42;UBERON:0004572,9.45e-12,42;UBERON:0004872,1.26e-11,83;UBERON:0000055,3.06e-11,68;UBERON:0000486,4.88e-11,83;UBERON:0007500,5.52e-11,59;UBERON:0001981,5.52e-11,59;UBERON:0004537,5.52e-11,59;UBERON:0006965,5.52e-11,59;UBERON:0005256,1.44e-10,122;UBERON:0004573,1.47e-10,33;UBERON:0004571,1.47e-10,33;UBERON:0003104,9.70e-10,160;UBERON:0009142,9.70e-10,160;UBERON:0003914,1.88e-09,117 | |||
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| ||
|short_description=p5@CUL4B | |||
}} | }} |
Latest revision as of 06:29, 19 September 2015
Short description: | p5@CUL4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CUL4B_5end |
Coexpression cluster: | C964_Nucleus_Anulus_meningioma_large_Olfactory_Chondrocyte_Mesothelial |
Association with transcript: | 130bp_to_AY365125_5end |
EntrezGene: | CUL4B |
HGNC: | 2555 |
UniProt: | Q13620 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.87e-21 | 121 |
fibroblast | 1.15e-19 | 76 |
muscle precursor cell | 7.67e-16 | 58 |
myoblast | 7.67e-16 | 58 |
multi-potent skeletal muscle stem cell | 7.67e-16 | 58 |
muscle cell | 3.09e-14 | 55 |
multi fate stem cell | 1.83e-12 | 427 |
smooth muscle cell | 3.72e-12 | 43 |
smooth muscle myoblast | 3.72e-12 | 43 |
vascular associated smooth muscle cell | 2.15e-11 | 32 |
somatic stem cell | 2.74e-11 | 433 |
electrically responsive cell | 3.03e-11 | 61 |
electrically active cell | 3.03e-11 | 61 |
stem cell | 5.35e-10 | 441 |
skin fibroblast | 2.22e-09 | 23 |
lining cell | 1.13e-07 | 58 |
barrier cell | 1.13e-07 | 58 |
mesothelial cell | 3.12e-07 | 19 |