FFCP PHASE1:Hg19::chrX:99891832..99891852,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:99891832..99891852,- to FFCP PHASE1:Hg19::chrX:99891832..99891852,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7105 | |EntrezGene=7105 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11858 | |HGNC=11858 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUC3 | |UniProt=E7EUC3 | ||
|association_with_transcript=0bp_to_ENST00000431386_5end | |||
|cluster_id=chrX:99891832..99891852,- | |||
|description=CAGE_peak_5_at_TSPAN6_5end | |||
|id=chrX:99891832..99891852,- | |||
|ontology_enrichment_celltype=CL:0002139!4.00e-15!24;CL:0000071!5.17e-11!18;CL:0002546!5.17e-11!18;CL:0000115!5.85e-10!35;CL:0002078!4.19e-07!44;CL:0000213!5.73e-07!57;CL:0000215!5.73e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.83e-21;24!CL:0000071;2.62e-15;18!CL:0000115;8.90e-15;36!CL:0002078;1.04e-08;45!CL:0002138;8.23e-08;6!CL:1000413;1.18e-07;9!CL:0000213;3.71e-07;58!CL:0000215;3.71e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.04e-21,24;CL:0000115,3.13e-17,36;CL:0000071,1.35e-15,18;CL:0002546,1.35e-15,18;CL:0002078,1.14e-12,45;CL:0000213,4.81e-10,58;CL:0000215,4.81e-10,58;CL:1000413,8.64e-08,9;CL:0005020,9.45e-08,6;CL:0002138,9.45e-08,6;CL:0005022,9.45e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.62e-15;18!CL:0005022;8.23e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.41e-17!659;UBERON:0000477!2.87e-14!286;UBERON:0004111!6.13e-12!241;UBERON:0000119!4.74e-11!312;UBERON:0001986!5.17e-11!18;UBERON:0004638!5.17e-11!18;UBERON:0004852!5.17e-11!18;UBERON:0000467!6.24e-11!625;UBERON:0000483!8.75e-11!309;UBERON:0000480!1.05e-10!626;UBERON:0000922!1.55e-10!612;UBERON:0006914!3.24e-10!25;UBERON:0002049!7.57e-10!79;UBERON:0007798!7.57e-10!79;UBERON:0000487!1.22e-09!22;UBERON:0000475!4.03e-09!365;UBERON:0000481!9.74e-09!347;UBERON:0004872!1.06e-08!84;UBERON:0000025!1.75e-08!194;UBERON:0000490!1.82e-08!138;UBERON:0002050!2.53e-08!605;UBERON:0005423!2.53e-08!605;UBERON:0000055!3.04e-08!69;UBERON:0000923!4.08e-08!604;UBERON:0005291!4.08e-08!604;UBERON:0006598!4.08e-08!604;UBERON:0002532!4.08e-08!604;UBERON:0003914!6.32e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.62e-15;18!UBERON:0001986;2.62e-15;18!UBERON:0004852;2.62e-15;18!UBERON:0000487;1.73e-12;22!UBERON:0006914;1.62e-11;25!UBERON:0000490;5.10e-08;33!UBERON:0003915;1.18e-07;9!UBERON:0004700;1.18e-07;9!UBERON:0001917;1.18e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.35e-15,18;UBERON:0001986,1.35e-15,18;UBERON:0004852,1.35e-15,18;UBERON:0000487,8.90e-13,22;UBERON:0006914,8.89e-12,25;UBERON:0002049,2.27e-09,78;UBERON:0007798,2.27e-09,78;UBERON:0000055,1.43e-08,68;UBERON:0003915,8.64e-08,9;UBERON:0004700,8.64e-08,9;UBERON:0001917,8.64e-08,9;UBERON:0004872,6.46e-07,83 | |||
|phase1_expression=0.908391896352783,0.642301571672949,1.40954404095971,0,0.893922188854576,0,0,1.89515962028049,1.56711376919903,0,0,0.655324116390517,1.31883489114227,3.09415882400117,0.994192127183747,2.01697543935533,0.602694528023977,1.46062018077475,0.975865597581014,0.61560529038394,0,0.313454721478088,1.14494394852423,0.684372125364421,0.753255837568817,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0,0,1.34140171940727,1.66221330396589,0,2.00535164254356,2.02785126545153,3.9764297352555,6.32625331393427,0.945348171640679,1.10864698731282,1.66886092816939,1.24430121722827,0,0.741568885568859,0,0,0,0,0,0,3.7764857399674,5.16140757063675,2.77712401286075,1.13061588384802,2.09749718104953,2.75118041940067,2.50793959844173,8.78616981175718,11.028754143288,8.03329470635209,4.02829317109147,8.36299316290364,4.39311703586705,1.83831540172934,4.86085168729056,8.03697554556718,3.36794058939255,1.91439516821648,3.06633274931766,5.69559395740877,5.1296488300514,0,0,0.436094052142534,0,0.759783069987479,0.264818361626438,0,0.354668382198357,1.12135520028461,1.06748995729705,0.24666754841716,1.24484414159907,0.942974704487816,0.326923806226917,1.05950199351452,2.30470369792,0.234321431833797,0,1.71141546463335,0.448346041655403,0.352303495931295,0.323745888736263,0.702254033511242,0,0.982674538494144,0.723280468230358,2.37600571456411,0.741800787835671,0,0.718618141816238,0.673344455816265,1.12606667884768,0.277064115484183,0.877955241761676,0.919463387397059,0.300476117813194,0.794025282120147,0,2.34913127700424,1.27159140695737,0.300091096084402,0.824420233907511,0.257640540045629,1.11670113798954,0.843881661206331,0.194874010322397,0.757301322732344,1.56484827691909,2.26304479546337,1.77504796258307,0.906768884048762,0.339121184620975,0.57978255948989,0,0.860413786167011,5.85473789422058,7.81925633096763,6.39066685782351,4.45742536566093,4.54177531576131,3.28479623168247,1.56449532329816,1.28648187638577,0,3.25057549622385,2.16563844500876,0.709840800239063,0.505754070234305,0.482022059766964,0.992645754591546,0.217879444092406,0,0.539325232640658,0.196221465125346,0.38474715694639,4.42893272774789,1.40241773803446,1.2347220339942,0,1.26755034821831,0.982827216677626,0.590789906681404,0,1.8448265781467,0.686271241194102,0.109750285408626,0,0.100528972411631,0.462942225792648,0,0,1.44331342025273,1.62302566965108,0.587043471179108,9.09508620894765,7.40776820122577,6.27838702374174,0,1.71697232418975,0,0,0,0,0.671928512795438,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0.720599767084807,0.25248486685276,0.380987365753014,0.763976851116555,0,0,0.308482478109971,0.901029173531752,0.571652865261156,0.336393253036082,1.30788020649984,1.0267360014933,1.68053230485111,0,1.690605505112,0.531876233169741,0,0.257207374262142,1.41849132023278,0,1.28680194292333,0.542621605391443,1.64648067356154,1.62868092146868,0,0.791951872933429,1.50719688529793,0.871533458600294,0.699810938274399,0,0,0,0.479249710983165,0,0,0.579125226670317,0.410952645100767,0.716243852959582,0,0,0,0,0.76228387266739,0,0,1.67516265334349,0,0,0,0,3.6807447515742,5.00170521059677,1.35632511849868,0.415941723061614,0,0.315404830067869,0.702848489956279,3.00946099727719,2.27407504055985,3.10419213877515,0,0.553107505625109,1.04260337361699,1.17480694477644,0.686286847621712,0.206768026122887,0,0,0.909382714338778,1.66435439510497,0.907170879989041,0.992431231275107,0.306923946576125,0.561320188866147,2.17836553734692,1.53512174720011,0.482561763430822,1.48418066444991,0.308419387605311,1.06537035187876,0.328508624055237,1.55776328755086,0.348631135379878,1.0877350463246,1.00253235151642,0.552485933615378,0.68888668898764,0.546273504020151,0.393373244878272,0,0.616122696835318,0,0,1.47772280450026,1.13733384070897,2.04112446331819,2.15915916102139,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0.984043937099117,2.92840555197873,2.26690225624989,0.0915694648183434,0,0.574265537996172,0,1.6068392984416,1.16004861950546,0.924291702687866,0.614014698904518,0.551346289938122,1.82614416276065,0.435050081742686,0.255679882248303,1.69160867728801,0.330569830721956,0.192190067365106,0,0.10115778085555,1.39453664789186,0.62962469366128,0.6970372701606,0.616067160352178,0.532306030317022,0.869932992075073,1.11194531462352,0.429374660225974,1.86079184679834,1.58189712359363,0.953150969619124,0.255897791311334,0,1.90921948755562,0,1.07923474549989,0.274537029736055,0.824686816419805,1.01091240786658,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,1.41405431953713,1.13008116620243,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0.405820753925408,0.92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| ||
|short_description=p5@TSPAN6 | |||
}} | }} |
Latest revision as of 15:59, 16 September 2015
Short description: | p5@TSPAN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TSPAN6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000431386_5end |
EntrezGene: | TSPAN6 |
HGNC: | 11858 |
UniProt: | E7EUC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.04e-21 | 24 |
endothelial cell | 3.13e-17 | 36 |
blood vessel endothelial cell | 1.35e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.35e-15 | 18 |
meso-epithelial cell | 1.14e-12 | 45 |
lining cell | 4.81e-10 | 58 |
barrier cell | 4.81e-10 | 58 |
endothelial cell of artery | 8.64e-08 | 9 |
lymphangioblast | 9.45e-08 | 6 |
endothelial cell of lymphatic vessel | 9.45e-08 | 6 |
vascular lymphangioblast | 9.45e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.35e-15 | 18 |
endothelium | 1.35e-15 | 18 |
cardiovascular system endothelium | 1.35e-15 | 18 |
simple squamous epithelium | 8.90e-13 | 22 |
squamous epithelium | 8.89e-12 | 25 |
vasculature | 2.27e-09 | 78 |
vascular system | 2.27e-09 | 78 |
vessel | 1.43e-08 | 68 |
endothelial tube | 8.64e-08 | 9 |
arterial system endothelium | 8.64e-08 | 9 |
endothelium of artery | 8.64e-08 | 9 |
splanchnic layer of lateral plate mesoderm | 6.46e-07 | 83 |