FFCP PHASE1:Mm9::chr10:79459224..79459250,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:79459224..79459250,+ to FFCP PHASE1:Mm9::chr10:79459224..79459250,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27403 | |EntrezGene=27403 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2584 | |||
|TSSclassifier=NA | |||
|UniProt=Q91V24 | |UniProt=Q91V24 | ||
|association_with_transcript=0bp_to_ENSMUST00000132517_5end | |||
|cluster_id=chr10:79459224..79459250,+ | |||
|description=CAGE_peak_1_at_Abca7_5end | |||
|id=chr10:79459224..79459250,+ | |||
|ontology_enrichment_celltype=CL:0000049!1.68e-10!19;CL:0000988!1.82e-10!32;CL:0002032!1.82e-10!32;CL:0000037!1.82e-10!32;CL:0000566!1.82e-10!32;CL:0000837!1.82e-10!32;CL:0000763!1.28e-09!16;CL:0002031!2.74e-09!25;CL:0000839!2.27e-08!13;CL:0002320!3.37e-08!46;CL:0000134!3.37e-08!46;CL:0000219!3.46e-08!54;CL:0000063!7.93e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.67e-10,19;CL:0000988,1.82e-10,32;CL:0002032,1.82e-10,32;CL:0000037,1.82e-10,32;CL:0000837,1.82e-10,32;CL:0000763,1.28e-09,16;CL:0002031,2.74e-09,25;CL:0000839,2.27e-08,13;CL:0002320,3.22e-08,46;CL:0000134,3.22e-08,46;CL:0000219,3.32e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.88e-14!48;UBERON:0002390!4.57e-13!45;UBERON:0003061!4.57e-13!45;UBERON:0002405!3.32e-11!70;UBERON:0002371!1.15e-09!16;UBERON:0002384!3.37e-08!46;UBERON:0002204!6.68e-08!32;UBERON:0001474!1.12e-07!22;UBERON:0004765!1.12e-07!22;UBERON:0001434!1.12e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.60e-14,48;UBERON:0002405,4.60e-14,48;UBERON:0002390,4.31e-13,45;UBERON:0003061,4.31e-13,45;UBERON:0002371,1.15e-09,16;UBERON:0002384,3.22e-08,46;UBERON:0002204,6.68e-08,32;UBERON:0001474,1.12e-07,22;UBERON:0004765,1.12e-07,22;UBERON:0001434,1.12e-07,22 | |||
|phase1_expression=1.28119077683835,13.6100408979351,17.7449703361919,22.0798874253986,16.5295590882295,6.88305014838748,6.77476657727024,19.3684985162364,4.22366166455,3.97909694747389,2.05461561870606,1.11681022593471,20.2016861318823,24.2154514700623,21.3190247562024,23.4871310172198,44.0723983220732,11.8298312009339,12.614527891728,13.580468857537,5.44277056966847,10.9220046320974,9.14199261986274,7.67963629408352,8.25873411841812,13.2073351746455,8.18447792702242,8.18790684206378,8.93110071444957,7.56090389279792,4.43461021310609,19.6859508772486,36.9038872550742,15.8481681015439,1.1554064790051,0.664938581433969,1.02084678131185,45.201416119586,32.0347491254758,36.6466620781659,53.5290654108223,47.8131839470912,44.6669524788661,3.02152363141385,2.53442328048786,2.75320128242522,8.60630478782843,5.66865406589161,3.51497892375155,3.11087838518853,6.15940255151595,10.062679505548,12.5836954543302,27.5637613964311,28.9040667262519,10.8048963135098,6.87680255853016,8.25075347643908,3.03474691289397,1.05798195854407,0.633831403506179,4.06613438482959,5.33576877666684,17.0980946283466,26.6993917893083,26.9982443679518,16.4780060785123,11.1423308543251,1.45165457231869,1.62007125998029,1.26194976810829,5.42736870367227,3.75476519617743,0.857435594504678,1.15014565221884,4.5960939330501,8.8092704799511,4.21368215681119,5.52983519722476,2.76961204233407,1.73826522844578,1.56274011167028,4.18774498502071,5.06486349028512,3.97275444219706,3.24091444021034,2.70506193518296,3.54158947068071,2.95332153999418,6.2724394888632,10.7249860819621,1.72084775396277,0,1.61910957491345,1.94932925234301,1.34408066129201,5.47733238513832,4.94247935476367,4.93593408745451,5.65343319216544,1.12674735821344,7.69958864485907,5.09610479413291,0,7.14420435337007,6.84071636782766,6.0662933401774,3.76806803072898,13.9826457169473,5.78924342352817,4.51061849591953,5.1759131313064,5.99600292865752,4.52167921657868,3.88042733547826,6.53466274914312,5.93267922562497,2.89198713839823,15.9229899350977,3.07357014900077,11.2629174414801,9.69750506270444,5.59175283654366,6.73395833126558,8.3778682725382,7.40825460104915,7.6681679683789,13.7977628128484,9.91147771169905,4.19413790333504,2.28750301409313,0.753926112677186,3.30266208365325,2.30143911597297,5.40248915854856,2.75810147215188,1.32391173005411,14.9288364732112,1.26361379216837,2.52530227063769,0.910843100738926,1.37941262660084,1.62055916824814,1.9591626318643,1.90502197623718,1.7935920839879,2.06143794031403,1.55222022443409,1.29340795759705,1.70195472151037,1.40760899331159,2.84954452155847,0.834141747676794,5.57203466435466,2.26360350048738,2.38841120182192,12.6398373716382,13.8967869841946,11.9348669746149,2.48550927042602,1.17263029990548,1.44049649168812,1.18372367792605,1.57411385397923,2.00547246753592,4.41814495025775,6.17028823219124,1.63471479314037,2.30383789878873,3.2833492815819,3.4859588104718,3.50879969820798,4.61055242111206,3.35516046900929,1.47202963994889,1.02904612379284,14.5384264512871,7.1401652999157,1.06644125267617,3.94802342162745,1.80414445850931,2.8235693447268,2.44615848229357,4.1849637744763,8.0669940462567,3.95277491337626,3.2673577144035,2.58643413653496,3.31438948102504,9.88701349519644,5.61958929674205,11.948476395262,1.13800740571849,3.19895835307241,5.63538678365402,2.64746726198909,3.10323979468201,2.17421041659988,2.59269802209455,3.09981310757165,3.1399745568275,4.81248939295022,4.15033677922008,15.3497497258807,14.7419246334902,17.9889689907883,18.2574109249653,18.8118184606885,13.2405442926338,19.8510334841059,9.07957269940198,4.66754402419738,2.87536413054709,5.20997326735905,3.12037673114561,2.02063102357689,1.79397413521912,1.4473305640901,7.7596339869974,1.89491411770485,3.42226450528254,1.69745085775188,3.05097322775053,5.86271901046355,8.33152743101048,10.7323506321789,4.09851374676097,3.98636441367795,7.33491935824441,9.34020893879707,11.9152637487468,9.11289069063523,43.729472342389,41.8807376540406,2.95058563811422,1.65562047782839,4.0137647496948,6.21221938938677,0.819674726883377,3.02965112645248,7.57219726599016,5.46614242015294,7.10897212518236,4.54040716109849,5.12436950389506,5.37845408498782,10.1202675418724,7.59865230569411,8.69633111482352,4.4984984299053,4.5420827266646,2.13678724400706,1.95464351224291,4.12425307431339,1.32745138339963,2.18502572539483,1.51161778482376,2.64047111658257,2.65771703592696,4.30409207121498,3.10113951801865,3.27180356529755,3.20847640546249,3.79244109522979,6.32511651449993,2.06271086496374,6.46835250932197,1.8006109403131,2.06973894052407,3.21505552547388,3.90148514013002,3.0322698992352,2.46823530903181,4.87143918583359,4.92810586933792,4.87213762986786,5.29268155331909,5.93590510589328,3.71368181400583,4.28221766989907,3.9392873521035,3.44695889464629,6.99554007911642,4.26478194624172,18.7957968877638,10.1129565301979,12.0376442790313,22.7925832975676,19.2738861086645,16.2432502976631,6.79913719975421,8.95689294871411,8.153798454461,3.81868247206045,1.10717597753397,3.45643094115643,3.8881922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| |phase1_expression=1.28119077683835,13.6100408979351,17.7449703361919,22.0798874253986,16.5295590882295,6.88305014838748,6.77476657727024,19.3684985162364,4.22366166455,3.97909694747389,2.05461561870606,1.11681022593471,20.2016861318823,24.2154514700623,21.3190247562024,23.4871310172198,44.0723983220732,11.8298312009339,12.614527891728,13.580468857537,5.44277056966847,10.9220046320974,9.14199261986274,7.67963629408352,8.25873411841812,13.2073351746455,8.18447792702242,8.18790684206378,8.93110071444957,7.56090389279792,4.43461021310609,19.6859508772486,36.9038872550742,15.8481681015439,1.1554064790051,0.664938581433969,1.02084678131185,45.201416119586,32.0347491254758,36.6466620781659,53.5290654108223,47.8131839470912,44.6669524788661,3.02152363141385,2.53442328048786,2.75320128242522,8.60630478782843,5.66865406589161,3.51497892375155,3.11087838518853,6.15940255151595,10.062679505548,12.5836954543302,27.5637613964311,28.9040667262519,10.8048963135098,6.87680255853016,8.25075347643908,3.03474691289397,1.05798195854407,0.633831403506179,4.06613438482959,5.33576877666684,17.0980946283466,26.6993917893083,26.9982443679518,16.4780060785123,11.1423308543251,1.45165457231869,1.62007125998029,1.26194976810829,5.42736870367227,3.75476519617743,0.857435594504678,1.15014565221884,4.5960939330501,8.8092704799511,4.21368215681119,5.52983519722476,2.76961204233407,1.73826522844578,1.56274011167028,4.18774498502071,5.06486349028512,3.97275444219706,3.24091444021034,2.70506193518296,3.54158947068071,2.95332153999418,6.2724394888632,10.7249860819621,1.72084775396277,0,1.61910957491345,1.94932925234301,1.34408066129201,5.47733238513832,4.94247935476367,4.93593408745451,5.65343319216544,1.12674735821344,7.69958864485907,5.09610479413291,0,7.14420435337007,6.84071636782766,6.0662933401774,3.76806803072898,13.9826457169473,5.78924342352817,4.51061849591953,5.1759131313064,5.99600292865752,4.52167921657868,3.88042733547826,6.53466274914312,5.93267922562497,2.89198713839823,15.9229899350977,3.07357014900077,11.2629174414801,9.69750506270444,5.59175283654366,6.73395833126558,8.3778682725382,7.40825460104915,7.6681679683789,13.7977628128484,9.91147771169905,4.19413790333504,2.28750301409313,0.753926112677186,3.30266208365325,2.30143911597297,5.40248915854856,2.75810147215188,1.32391173005411,14.9288364732112,1.26361379216837,2.52530227063769,0.910843100738926,1.37941262660084,1.62055916824814,1.9591626318643,1.90502197623718,1.7935920839879,2.06143794031403,1.55222022443409,1.29340795759705,1.70195472151037,1.40760899331159,2.84954452155847,0.834141747676794,5.57203466435466,2.26360350048738,2.38841120182192,12.6398373716382,13.8967869841946,11.9348669746149,2.48550927042602,1.17263029990548,1.44049649168812,1.18372367792605,1.57411385397923,2.00547246753592,4.41814495025775,6.17028823219124,1.63471479314037,2.30383789878873,3.2833492815819,3.4859588104718,3.50879969820798,4.61055242111206,3.35516046900929,1.47202963994889,1.02904612379284,14.5384264512871,7.1401652999157,1.06644125267617,3.94802342162745,1.80414445850931,2.8235693447268,2.44615848229357,4.1849637744763,8.0669940462567,3.95277491337626,3.2673577144035,2.58643413653496,3.31438948102504,9.88701349519644,5.61958929674205,11.948476395262,1.13800740571849,3.19895835307241,5.63538678365402,2.64746726198909,3.10323979468201,2.17421041659988,2.59269802209455,3.09981310757165,3.1399745568275,4.81248939295022,4.15033677922008,15.3497497258807,14.7419246334902,17.9889689907883,18.2574109249653,18.8118184606885,13.2405442926338,19.8510334841059,9.07957269940198,4.66754402419738,2.87536413054709,5.20997326735905,3.12037673114561,2.02063102357689,1.79397413521912,1.4473305640901,7.7596339869974,1.89491411770485,3.42226450528254,1.69745085775188,3.05097322775053,5.86271901046355,8.33152743101048,10.7323506321789,4.09851374676097,3.98636441367795,7.33491935824441,9.34020893879707,11.9152637487468,9.11289069063523,43.729472342389,41.8807376540406,2.95058563811422,1.65562047782839,4.0137647496948,6.21221938938677,0.819674726883377,3.02965112645248,7.57219726599016,5.46614242015294,7.10897212518236,4.54040716109849,5.12436950389506,5.37845408498782,10.1202675418724,7.59865230569411,8.69633111482352,4.4984984299053,4.5420827266646,2.13678724400706,1.95464351224291,4.12425307431339,1.32745138339963,2.18502572539483,1.51161778482376,2.64047111658257,2.65771703592696,4.30409207121498,3.10113951801865,3.27180356529755,3.20847640546249,3.79244109522979,6.32511651449993,2.06271086496374,6.46835250932197,1.8006109403131,2.06973894052407,3.21505552547388,3.90148514013002,3.0322698992352,2.46823530903181,4.87143918583359,4.92810586933792,4.87213762986786,5.29268155331909,5.93590510589328,3.71368181400583,4.28221766989907,3.9392873521035,3.44695889464629,6.99554007911642,4.26478194624172,18.7957968877638,10.1129565301979,12.0376442790313,22.7925832975676,19.2738861086645,16.2432502976631,6.79913719975421,8.95689294871411,8.153798454461,3.81868247206045,1.10717597753397,3.45643094115643,3.8881922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| ||
|short_description=p1@Abca7 | |||
}} | }} |
Latest revision as of 09:17, 26 September 2015
Short description: | p1@Abca7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Abca7_5end |
Coexpression cluster: | MCL_coexpression_mm9:2584 |
Association with transcript: | 0bp_to_ENSMUST00000132517_5end |
EntrezGene: | Abca7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.67e-10 | 19 |
hematopoietic cell | 1.82e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.82e-10 | 32 |
hematopoietic stem cell | 1.82e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.82e-10 | 32 |
myeloid cell | 1.28e-09 | 16 |
hematopoietic lineage restricted progenitor cell | 2.74e-09 | 25 |
myeloid lineage restricted progenitor cell | 2.27e-08 | 13 |
connective tissue cell | 3.22e-08 | 46 |
mesenchymal cell | 3.22e-08 | 46 |
motile cell | 3.32e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.60e-14 | 48 |
immune system | 4.60e-14 | 48 |
hematopoietic system | 4.31e-13 | 45 |
blood island | 4.31e-13 | 45 |
bone marrow | 1.15e-09 | 16 |
connective tissue | 3.22e-08 | 46 |
musculoskeletal system | 6.68e-08 | 32 |
bone element | 1.12e-07 | 22 |
skeletal element | 1.12e-07 | 22 |
skeletal system | 1.12e-07 | 22 |