FFCP PHASE1:Mm9::chr10:79482101..79482104,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr10:79482101..79482104,+ to FFCP PHASE1:Mm9::chr10:79482101..79482104,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=70719 | |EntrezGene=70719 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3TBD2 | |UniProt=Q3TBD2 | ||
|association_with_transcript=-293bp_to_ENSMUST00000043311_5end | |||
|cluster_id=chr10:79482101..79482104,+ | |||
|description=CAGE_peak_7_at_Hmha1_5end | |||
|id=chr10:79482101..79482104,+ | |||
|ontology_enrichment_celltype=CL:0002031!4.38e-09!25;CL:0000988!7.40e-08!32;CL:0002032!7.40e-08!32;CL:0000037!7.40e-08!32;CL:0000566!7.40e-08!32;CL:0000837!7.40e-08!32;CL:0000738!1.62e-07!17;CL:0002087!1.62e-07!17;CL:0000542!8.37e-07!13;CL:0000051!8.37e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,1.27e-13,2;CL:0000839,5.26e-12,13;CL:0002031,8.33e-12,25;CL:0000553,6.77e-10,6;CL:0000556,6.77e-10,6;CL:0000763,9.53e-10,16;CL:0000988,4.21e-09,32;CL:0002032,4.21e-09,32;CL:0000037,4.21e-09,32;CL:0000837,4.21e-09,32;CL:0000049,3.38e-08,19;CL:0000625,1.78e-07,1;CL:0002194,2.96e-07,4;CL:0000766,2.96e-07,4;CL:0000234,2.96e-07,4;CL:0000576,2.96e-07,4;CL:0000235,2.96e-07,4;CL:0000864,2.96e-07,4;CL:0002009,2.96e-07,4;CL:0000040,2.96e-07,4;CL:0000559,2.96e-07,4;CL:0000050,9.07e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.72e-15!45;UBERON:0003061!6.72e-15!45;UBERON:0002405!1.50e-13!70;UBERON:0002193!2.06e-13!48;UBERON:0004177!2.25e-13!29;UBERON:0005057!3.20e-12!51;UBERON:0002370!2.25e-09!23;UBERON:0000974!2.25e-09!23;UBERON:0004807!2.25e-09!23;UBERON:0005058!2.25e-09!23;UBERON:0003351!2.25e-09!23;UBERON:0009113!2.25e-09!23;UBERON:0003295!2.25e-09!23;UBERON:0009722!2.25e-09!23;UBERON:0005562!2.25e-09!23;UBERON:0007690!2.25e-09!23;UBERON:0006562!8.49e-09!24;UBERON:0003408!8.49e-09!24;UBERON:0001557!8.49e-09!24;UBERON:0001042!8.49e-09!24;UBERON:0008814!8.49e-09!24;UBERON:0009145!8.49e-09!24;UBERON:0000077!6.95e-08!97;UBERON:0000065!8.01e-08!41;UBERON:0003081!1.43e-07!88;UBERON:0001041!1.45e-07!92;UBERON:0001004!1.69e-07!42;UBERON:0000072!2.44e-07!27;UBERON:0005911!4.92e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-15,45;UBERON:0003061,1.04e-15,45;UBERON:0002193,1.18e-14,48;UBERON:0002405,1.18e-14,48;UBERON:0002371,9.53e-10,16;UBERON:0004177,1.52e-07,29;UBERON:0005057,1.52e-07,29;UBERON:0003081,1.65e-07,87;UBERON:0001474,4.57e-07,22;UBERON:0004765,4.57e-07,22;UBERON:0001434,4.57e-07,22;UBERON:0002370,7.86e-07,23;UBERON:0000974,7.86e-07,23;UBERON:0004807,7.86e-07,23;UBERON:0005058,7.86e-07,23;UBERON:0003351,7.86e-07,23;UBERON:0009113,7.86e-07,23;UBERON:0003295,7.86e-07,23;UBERON:0009722,7.86e-07,23;UBERON:0005562,7.86e-07,23;UBERON:0007690,7.86e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0,0,0,0,0.856003649656029,0.611942816932982,0.666219523631325,0.404950534779652,0,1.26184866143295,1.09691546884591,2.12194825899015,0.17008658030214,0.595745707205312,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.838913030288682,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0,2.87536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0.44292937929755,0,0.163863314715738,0.345369963731791,0.144649058581512,3.01582567878545,1.08781136763742,0,0.551873492609465,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.683483523191411,0,0.370389054739423,0.753473828018764,0.546776910884101,1.37266903923914,0,0,0.276399947608848,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.537080087002444,0.198681354781265,0.600977247599844,1.32920574457119,0.807731599585181,0.685861259894999,1.91569751759997,1.36441033035653,1.82802499116626,2.10378423926824,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0,0,0,0,0.856003649656029,0.611942816932982,0.666219523631325,0.404950534779652,0,1.26184866143295,1.09691546884591,2.12194825899015,0.17008658030214,0.595745707205312,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.838913030288682,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0,2.87536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0.44292937929755,0,0.163863314715738,0.345369963731791,0.144649058581512,3.01582567878545,1.08781136763742,0,0.551873492609465,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.683483523191411,0,0.370389054739423,0.753473828018764,0.546776910884101,1.37266903923914,0,0,0.276399947608848,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.537080087002444,0.198681354781265,0.600977247599844,1.32920574457119,0.807731599585181,0.685861259894999,1.91569751759997,1.36441033035653,1.82802499116626,2.10378423926824,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@Hmha1 | |||
}} | }} |
Latest revision as of 09:19, 26 September 2015
Short description: | p7@Hmha1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Hmha1_5end |
Coexpression cluster: | NA |
Association with transcript: | -293bp_to_ENSMUST00000043311_5end |
EntrezGene: | Hmha1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 1.27e-13 | 2 |
myeloid lineage restricted progenitor cell | 5.26e-12 | 13 |
hematopoietic lineage restricted progenitor cell | 8.33e-12 | 25 |
megakaryocyte progenitor cell | 6.77e-10 | 6 |
megakaryocyte | 6.77e-10 | 6 |
myeloid cell | 9.53e-10 | 16 |
hematopoietic cell | 4.21e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.21e-09 | 32 |
hematopoietic stem cell | 4.21e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.21e-09 | 32 |
common myeloid progenitor | 3.38e-08 | 19 |
CD8-positive, alpha-beta T cell | 1.78e-07 | 1 |
monopoietic cell | 2.96e-07 | 4 |
myeloid leukocyte | 2.96e-07 | 4 |
phagocyte | 2.96e-07 | 4 |
monocyte | 2.96e-07 | 4 |
macrophage | 2.96e-07 | 4 |
tissue-resident macrophage | 2.96e-07 | 4 |
macrophage dendritic cell progenitor | 2.96e-07 | 4 |
monoblast | 2.96e-07 | 4 |
promonocyte | 2.96e-07 | 4 |
megakaryocyte-erythroid progenitor cell | 9.07e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.04e-15 | 45 |
blood island | 1.04e-15 | 45 |
hemolymphoid system | 1.18e-14 | 48 |
immune system | 1.18e-14 | 48 |
bone marrow | 9.53e-10 | 16 |
hemopoietic organ | 1.52e-07 | 29 |
immune organ | 1.52e-07 | 29 |
lateral plate mesoderm | 1.65e-07 | 87 |
bone element | 4.57e-07 | 22 |
skeletal element | 4.57e-07 | 22 |
skeletal system | 4.57e-07 | 22 |
thymus | 7.86e-07 | 23 |
neck | 7.86e-07 | 23 |
respiratory system epithelium | 7.86e-07 | 23 |
hemolymphoid system gland | 7.86e-07 | 23 |
pharyngeal epithelium | 7.86e-07 | 23 |
thymic region | 7.86e-07 | 23 |
pharyngeal gland | 7.86e-07 | 23 |
entire pharyngeal arch endoderm | 7.86e-07 | 23 |
thymus primordium | 7.86e-07 | 23 |
early pharyngeal endoderm | 7.86e-07 | 23 |