FFCP PHASE1:Mm9::chr11:100217392..100217410,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:100217392..100217410,- to FFCP PHASE1:Mm9::chr11:100217392..100217410,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15114 | |EntrezGene=15114 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=159 | |||
|TSSclassifier=NA | |||
|UniProt=O35668 | |UniProt=O35668 | ||
|association_with_transcript=0bp_to_ENSMUST00000103124_5end | |||
|cluster_id=chr11:100217392..100217410,- | |||
|description=CAGE_peak_1_at_Hap1_5end | |||
|id=chr11:100217392..100217410,- | |||
|ontology_enrichment_celltype=CL:0000540!7.16e-16!33;CL:0000047!7.16e-16!33;CL:0000031!7.16e-16!33;CL:0000404!7.16e-16!33;CL:0000221!1.00e-12!44;CL:0000133!1.00e-12!44;CL:0002319!1.43e-12!43;CL:0000117!7.83e-12!23;CL:0000337!7.83e-12!23;CL:0000393!2.72e-10!39;CL:0000211!2.72e-10!39;CL:0000055!3.80e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.53e-16,33;CL:0000047,5.53e-16,33;CL:0000031,5.53e-16,33;CL:0000404,5.53e-16,33;CL:0000221,8.20e-13,44;CL:0000133,8.20e-13,44;CL:0002319,1.17e-12,43;CL:0000117,6.50e-12,23;CL:0000337,6.50e-12,23;CL:0000393,4.08e-10,39;CL:0000211,4.08e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.46e-28!73;UBERON:0005743!1.46e-28!73;UBERON:0000073!4.31e-27!75;UBERON:0001016!4.31e-27!75;UBERON:0004121!3.71e-26!102;UBERON:0000924!3.71e-26!102;UBERON:0006601!3.71e-26!102;UBERON:0002346!1.48e-25!71;UBERON:0003075!1.48e-25!71;UBERON:0007284!1.48e-25!71;UBERON:0001049!2.33e-19!52;UBERON:0005068!2.33e-19!52;UBERON:0006241!2.33e-19!52;UBERON:0007135!2.33e-19!52;UBERON:0000955!7.42e-18!50;UBERON:0006238!7.42e-18!50;UBERON:0000033!1.00e-17!63;UBERON:0002616!3.02e-17!49;UBERON:0003056!7.67e-16!49;UBERON:0003080!7.72e-15!40;UBERON:0002780!3.37e-14!39;UBERON:0001890!3.37e-14!39;UBERON:0006240!3.37e-14!39;UBERON:0002020!4.17e-12!34;UBERON:0002791!5.47e-09!29;UBERON:0003528!5.47e-09!29;UBERON:0001893!5.47e-09!29;UBERON:0000468!1.62e-08!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.92e-29,73;UBERON:0001016,2.71e-27,75;UBERON:0004121,1.54e-22,95;UBERON:0000924,1.54e-22,95;UBERON:0006601,1.54e-22,95;UBERON:0002346,2.81e-22,64;UBERON:0003075,2.81e-22,64;UBERON:0007284,2.81e-22,64;UBERON:0000073,6.81e-21,54;UBERON:0001049,1.68e-19,52;UBERON:0005068,1.68e-19,52;UBERON:0006241,1.68e-19,52;UBERON:0007135,1.68e-19,52;UBERON:0010371,3.52e-18,73;UBERON:0000955,4.56e-16,47;UBERON:0006238,4.56e-16,47;UBERON:0003056,5.92e-16,49;UBERON:0010314,1.07e-15,92;UBERON:0002616,1.80e-15,46;UBERON:0003080,6.07e-15,40;UBERON:0002780,2.68e-14,39;UBERON:0001890,2.68e-14,39;UBERON:0006240,2.68e-14,39;UBERON:0002020,3.44e-12,34;UBERON:0003528,4.78e-09,29;UBERON:0002791,4.78e-09,29;UBERON:0001893,4.78e-09,29 | |||
|phase1_expression=15.0539916278506,0.348975407639361,0.454999239389536,1.20985684522732,0,14.9412552001582,10.0453435456076,4.39019299701359,0.281577444303333,0.468129052643987,0,0,0.171200729931206,0.34968160967599,1.99865857089398,2.42970320867791,1.39912375625629,1.57731082679119,4.38766187538364,8.91218268775863,27.979242459702,0.0992909512008853,0.261199789138935,3.67982572424835,3.21172993494038,1.72269589234506,1.29228598847722,3.66301095566011,1.33016393619462,1.26015064879965,2.66076612786366,13.3356441426523,13.5314253268605,0,2.59966457776147,2.82598897109437,6.32925004413344,0,0,0,0,0.683045484958446,0,0.629484089877886,0.608261587317087,0.183546752161682,2.34717403304412,9.59310688073965,5.71184075109627,6.22175677037707,3.77963338388479,7.18762821824858,0.671130424230945,0.725362142011344,0.336093799142464,0.771778308107841,0.573066879877513,2.06268836910977,163.067067452836,220.589238356438,133.738426139804,0.338844532069132,0.889294796111139,0.449949858640699,0,0,13.1824048628098,31.890119341689,13.894408049336,11.8805225731888,11.3575479129746,568.159807979165,466.695227030759,19.1085646775328,19.456630616702,11.9498442259303,205.916697468857,177.996149290752,190.318494704486,348.839231046363,345.274366955494,340.156430973564,172.814276381855,399.561453122493,306.666083288058,404.230419269872,421.420175165345,184.535451367048,1.13589289999776,2.64500460373749,5.79728977403356,2.58127163094416,0.679971333707751,2.69851595818909,0,0.448026887097336,7.3031098468511,0,0,0,19.4363919291819,0,0,0,9.52560580449342,10.6411143499541,10.1104889002957,7.65031994117702,7.50919862576798,54.181380758661,45.6266409394937,47.1921491383819,33.9004780966406,43.4081204791553,44.0957651758893,29.7829821451331,2.47194967734374,0.578397427679647,0,0.647067399789637,0,0,3.72783522436244,12.8823550685081,15.4990563041957,2.29911349687732,0,0,0.127070227073065,249.551205248435,104.310137442647,84.1884159156192,73.1800388009484,61.3717097592793,165.607071513969,198.745547258003,4.68461073711455,9.20611582514688,28.3049489445716,7.36546495602659,10.2795149940536,9.42598628177239,9.18316862007281,15.9747106905858,27.1465631613798,34.3344770363397,32.4207966976662,40.3577258352864,0.646703978798527,1.51284864134255,1.40760899331159,1.31517439456545,2.22437799380478,0.696504333044333,0.411564272815887,2.18937693500343,0,0,0,4.97101854085205,8.20841209933837,6.66229627405755,7.81257627431194,4.52557733019029,5.24508183817086,3.48800917125612,3.21928081679543,0.934122738937356,2.30383789878873,0.985004784474571,1.13496333364198,0.877199924551994,1.09775057645525,0.939444931322602,72.1294523574957,27.1668176681311,1.32167513193519,2.3800550999719,10.8777007772969,13.4697269679054,11.4692040576663,7.66397393568702,6.44896327150124,8.75037880117772,5.69434873853414,8.72904460037258,11.5614196048124,12.1363447945102,7.79856348476481,0.898819408654221,2.59365659849633,4.77939055810481,7.2073802362171,12.3388393618507,11.270773567308,10.1825663922657,8.92181440971078,12.4841759404767,9.73842671713562,2.50937251565324,1.72698600625512,2.96153193412321,1.1858105083486,0.500535317148282,0.982794975566015,0.674586337154561,0.608580364165509,0.964708639009667,1.01850340712568,1.43848068725405,1.78348749452539,3.0201755450689,0,2.97712758134803,0.936113019343682,3.53610429125956,0,0.482443521363367,7.944387177164,5.68474235311454,9.77789858652155,12.3913912615887,19.0099101113687,7.87279409976534,6.18913466303636,7.21994497073856,5.83250033192907,5.97954662051692,4.78364305972461,4.58817281204066,5.69860440157455,7.23245292907558,0,1.08781136763742,3.44234991113325,2.20749397043786,113.348716531381,144.990856314555,0.327869890753351,0.504941854408746,48.2727575706873,49.9761592699697,75.8290360019452,33.2166629154047,30.523418349288,37.3661020641259,49.3869056043371,55.2363571452379,54.5497133566202,162.909907425856,6.10342366395555,3.20518086601059,2.93196526836437,3.95928295134085,3.98235415019888,34.7176309701623,29.6277085825456,18.483297816078,15.9463022155617,18.7535440245796,17.573123935439,21.8120237686503,19.250858432775,8.84902922220285,6.32511651449993,6.18813259489121,81.0246261694015,44.6551513197649,72.699580285908,70.5168845253939,78.9164039708117,79.7308614681255,79.1480789096202,118.436865205579,1.87737366450968,1.90648863777438,10.8058915046931,1.81374878235628,0.807322133479528,1.38719727334758,1.67121281604391,2.9545361954111,5.82961673259701,110.513479998264,9.56876932467975,2.06386867963222,4.07427960213366,5.27431679613135,8.61173634642459,9.37990510146743,0.169978429993855,0.979660166265606,0.414599921413271,9.54670618015114,12.811607740036,10.5726122905961,11.1245501046455,8.78170843260769,10.4814030598165,9.84509728609191,14.8776220305605,5.75863072364865,3.75883422546199,1.24267862617385,7.32800820289447,2.69129782879162,2.31641886639937,5.25018208528929,4.26227417476513,7.94093789806657,14.0828686374905,20.4420884205002,5.34782656571125,5.79801889982414,4.89651010638371,2.8441000856536,3.24360344464263,1.84879722896689,2.07873316764472,1.07416017400489,0.79472541912506,2.64429988943931,1.9199638532695,1.71642964911851,0.990688486514998,2.21817607301049,3.50848370663109,2.5977197242889,3.15567635890236,0.680191150845634,23.3085251042768,14.4439309141256,6.54750003819906,3.86379188064381,1.12609485270709,2.38097111547445,0.643105137237198,4.01257683228291,21.4605700194485,27.1591889539234,27.498984645091,25.0905646221784,20.5524755931193,30.9711497929777,33.0761025113585,31.0721630224712,29.4542565839733,22.7814537170801,10.2749474108335,14.7639203158381,15.0245573063638,16.7743634777123,28.5073901174056,43.5709115026533,29.3365680698132,25.7543821548618,27.2781328153043,22.2373546352142,27.1222850882557,28.2939512079114,27.905169226025,24.7777339806844,28.7751699467622,23.8146845641537,30.477577723497,24.4994709988905,37.4998169731009,29.1453861866107,31.5439712194582,29.8159354347687,29.0892151735732,30.2320546595243,33.4088300474424,31.7304779593787,30.0001875511347,30.7791562382276,27.4324309968641,17.9565526930476,31.7941848572787,28.3692909241623,34.7846386694236,30.5225577136353,24.1133263726427,59.4549175492311,23.6270924529862,22.5614606750713,13.9640482410256,12.7943023089319,9.50658126043728 | |phase1_expression=15.0539916278506,0.348975407639361,0.454999239389536,1.20985684522732,0,14.9412552001582,10.0453435456076,4.39019299701359,0.281577444303333,0.468129052643987,0,0,0.171200729931206,0.34968160967599,1.99865857089398,2.42970320867791,1.39912375625629,1.57731082679119,4.38766187538364,8.91218268775863,27.979242459702,0.0992909512008853,0.261199789138935,3.67982572424835,3.21172993494038,1.72269589234506,1.29228598847722,3.66301095566011,1.33016393619462,1.26015064879965,2.66076612786366,13.3356441426523,13.5314253268605,0,2.59966457776147,2.82598897109437,6.32925004413344,0,0,0,0,0.683045484958446,0,0.629484089877886,0.608261587317087,0.183546752161682,2.34717403304412,9.59310688073965,5.71184075109627,6.22175677037707,3.77963338388479,7.18762821824858,0.671130424230945,0.725362142011344,0.336093799142464,0.771778308107841,0.573066879877513,2.06268836910977,163.067067452836,220.589238356438,133.738426139804,0.338844532069132,0.889294796111139,0.449949858640699,0,0,13.1824048628098,31.890119341689,13.894408049336,11.8805225731888,11.3575479129746,568.159807979165,466.695227030759,19.1085646775328,19.456630616702,11.9498442259303,205.916697468857,177.996149290752,190.318494704486,348.839231046363,345.274366955494,340.156430973564,172.814276381855,399.561453122493,306.666083288058,404.230419269872,421.420175165345,184.535451367048,1.13589289999776,2.64500460373749,5.79728977403356,2.58127163094416,0.679971333707751,2.69851595818909,0,0.448026887097336,7.3031098468511,0,0,0,19.4363919291819,0,0,0,9.52560580449342,10.6411143499541,10.1104889002957,7.65031994117702,7.50919862576798,54.181380758661,45.6266409394937,47.1921491383819,33.9004780966406,43.4081204791553,44.0957651758893,29.7829821451331,2.47194967734374,0.578397427679647,0,0.647067399789637,0,0,3.72783522436244,12.8823550685081,15.4990563041957,2.29911349687732,0,0,0.127070227073065,249.551205248435,104.310137442647,84.1884159156192,73.1800388009484,61.3717097592793,165.607071513969,198.745547258003,4.68461073711455,9.20611582514688,28.3049489445716,7.36546495602659,10.2795149940536,9.42598628177239,9.18316862007281,15.9747106905858,27.1465631613798,34.3344770363397,32.4207966976662,40.3577258352864,0.646703978798527,1.51284864134255,1.40760899331159,1.31517439456545,2.22437799380478,0.696504333044333,0.411564272815887,2.18937693500343,0,0,0,4.97101854085205,8.20841209933837,6.66229627405755,7.81257627431194,4.52557733019029,5.24508183817086,3.48800917125612,3.21928081679543,0.934122738937356,2.30383789878873,0.985004784474571,1.13496333364198,0.877199924551994,1.09775057645525,0.939444931322602,72.1294523574957,27.1668176681311,1.32167513193519,2.3800550999719,10.8777007772969,13.4697269679054,11.4692040576663,7.66397393568702,6.44896327150124,8.75037880117772,5.69434873853414,8.72904460037258,11.5614196048124,12.1363447945102,7.79856348476481,0.898819408654221,2.59365659849633,4.77939055810481,7.2073802362171,12.3388393618507,11.270773567308,10.1825663922657,8.92181440971078,12.4841759404767,9.73842671713562,2.50937251565324,1.72698600625512,2.96153193412321,1.1858105083486,0.500535317148282,0.982794975566015,0.674586337154561,0.608580364165509,0.964708639009667,1.01850340712568,1.43848068725405,1.78348749452539,3.0201755450689,0,2.97712758134803,0.936113019343682,3.53610429125956,0,0.482443521363367,7.944387177164,5.68474235311454,9.77789858652155,12.3913912615887,19.0099101113687,7.87279409976534,6.18913466303636,7.21994497073856,5.83250033192907,5.97954662051692,4.78364305972461,4.58817281204066,5.69860440157455,7.23245292907558,0,1.08781136763742,3.44234991113325,2.20749397043786,113.348716531381,144.990856314555,0.327869890753351,0.504941854408746,48.2727575706873,49.9761592699697,75.8290360019452,33.2166629154047,30.523418349288,37.3661020641259,49.3869056043371,55.2363571452379,54.5497133566202,162.909907425856,6.10342366395555,3.20518086601059,2.93196526836437,3.95928295134085,3.98235415019888,34.7176309701623,29.6277085825456,18.483297816078,15.9463022155617,18.7535440245796,17.573123935439,21.8120237686503,19.250858432775,8.84902922220285,6.32511651449993,6.18813259489121,81.0246261694015,44.6551513197649,72.699580285908,70.5168845253939,78.9164039708117,79.7308614681255,79.1480789096202,118.436865205579,1.87737366450968,1.90648863777438,10.8058915046931,1.81374878235628,0.807322133479528,1.38719727334758,1.67121281604391,2.9545361954111,5.82961673259701,110.513479998264,9.56876932467975,2.06386867963222,4.07427960213366,5.27431679613135,8.61173634642459,9.37990510146743,0.169978429993855,0.979660166265606,0.414599921413271,9.54670618015114,12.811607740036,10.5726122905961,11.1245501046455,8.78170843260769,10.4814030598165,9.84509728609191,14.8776220305605,5.75863072364865,3.75883422546199,1.24267862617385,7.32800820289447,2.69129782879162,2.31641886639937,5.25018208528929,4.26227417476513,7.94093789806657,14.0828686374905,20.4420884205002,5.34782656571125,5.79801889982414,4.89651010638371,2.8441000856536,3.24360344464263,1.84879722896689,2.07873316764472,1.07416017400489,0.79472541912506,2.64429988943931,1.9199638532695,1.71642964911851,0.990688486514998,2.21817607301049,3.50848370663109,2.5977197242889,3.15567635890236,0.680191150845634,23.3085251042768,14.4439309141256,6.54750003819906,3.86379188064381,1.12609485270709,2.38097111547445,0.643105137237198,4.01257683228291,21.4605700194485,27.1591889539234,27.498984645091,25.0905646221784,20.5524755931193,30.9711497929777,33.0761025113585,31.0721630224712,29.4542565839733,22.7814537170801,10.2749474108335,14.7639203158381,15.0245573063638,16.7743634777123,28.5073901174056,43.5709115026533,29.3365680698132,25.7543821548618,27.2781328153043,22.2373546352142,27.1222850882557,28.2939512079114,27.905169226025,24.7777339806844,28.7751699467622,23.8146845641537,30.477577723497,24.4994709988905,37.4998169731009,29.1453861866107,31.5439712194582,29.8159354347687,29.0892151735732,30.2320546595243,33.4088300474424,31.7304779593787,30.0001875511347,30.7791562382276,27.4324309968641,17.9565526930476,31.7941848572787,28.3692909241623,34.7846386694236,30.5225577136353,24.1133263726427,59.4549175492311,23.6270924529862,22.5614606750713,13.9640482410256,12.7943023089319,9.50658126043728 | ||
|short_description=p1@Hap1 | |||
}} | }} |
Latest revision as of 16:19, 26 September 2015
Short description: | p1@Hap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_ENSMUST00000103124_5end |
EntrezGene: | Hap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.53e-16 | 33 |
neuronal stem cell | 5.53e-16 | 33 |
neuroblast | 5.53e-16 | 33 |
electrically signaling cell | 5.53e-16 | 33 |
ectodermal cell | 8.20e-13 | 44 |
neurectodermal cell | 8.20e-13 | 44 |
neural cell | 1.17e-12 | 43 |
CNS neuron (sensu Vertebrata) | 6.50e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.50e-12 | 23 |
electrically responsive cell | 4.08e-10 | 39 |
electrically active cell | 4.08e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.92e-29 | 73 |
nervous system | 2.71e-27 | 75 |
ectoderm-derived structure | 1.54e-22 | 95 |
ectoderm | 1.54e-22 | 95 |
presumptive ectoderm | 1.54e-22 | 95 |
neurectoderm | 2.81e-22 | 64 |
neural plate | 2.81e-22 | 64 |
presumptive neural plate | 2.81e-22 | 64 |
regional part of nervous system | 6.81e-21 | 54 |
neural tube | 1.68e-19 | 52 |
neural rod | 1.68e-19 | 52 |
future spinal cord | 1.68e-19 | 52 |
neural keel | 1.68e-19 | 52 |
ecto-epithelium | 3.52e-18 | 73 |
brain | 4.56e-16 | 47 |
future brain | 4.56e-16 | 47 |
pre-chordal neural plate | 5.92e-16 | 49 |
structure with developmental contribution from neural crest | 1.07e-15 | 92 |
regional part of brain | 1.80e-15 | 46 |
anterior neural tube | 6.07e-15 | 40 |
regional part of forebrain | 2.68e-14 | 39 |
forebrain | 2.68e-14 | 39 |
future forebrain | 2.68e-14 | 39 |
gray matter | 3.44e-12 | 34 |
brain grey matter | 4.78e-09 | 29 |
regional part of telencephalon | 4.78e-09 | 29 |
telencephalon | 4.78e-09 | 29 |