FFCP PHASE1:Mm9::chr11:120094272..120094294,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:120094272..120094294,+ to FFCP PHASE1:Mm9::chr11:120094272..120094294,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=268515 | |EntrezGene=268515 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q7G4,Q3UHR0 | |UniProt=E9Q7G4,Q3UHR0 | ||
|association_with_transcript=11bp_to_ENSMUST00000044985,ENSMUST00000122148,NM_198423,uc007msd.2,uc011yiy.1_5end | |||
|cluster_id=chr11:120094272..120094294,+ | |||
|description=CAGE_peak_2_at_Bahcc1_5end | |||
|id=chr11:120094272..120094294,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.51e-10!33;CL:0000047!1.51e-10!33;CL:0000031!1.51e-10!33;CL:0000404!1.51e-10!33;CL:0000117!6.00e-10!23;CL:0000337!6.00e-10!23;CL:0000221!9.16e-10!44;CL:0000133!9.16e-10!44;CL:0000393!1.14e-09!39;CL:0000211!1.14e-09!39;CL:0002319!2.48e-09!43;CL:0000055!4.07e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.07e-10,33;CL:0000047,1.07e-10,33;CL:0000031,1.07e-10,33;CL:0000404,1.07e-10,33;CL:0000117,4.37e-10,23;CL:0000337,4.37e-10,23;CL:0000221,6.37e-10,44;CL:0000133,6.37e-10,44;CL:0000393,1.12e-09,39;CL:0000211,1.12e-09,39;CL:0002319,1.76e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.95e-12!73;UBERON:0005743!2.95e-12!73;UBERON:0004121!6.37e-12!102;UBERON:0000924!6.37e-12!102;UBERON:0006601!6.37e-12!102;UBERON:0002346!1.68e-11!71;UBERON:0003075!1.68e-11!71;UBERON:0007284!1.68e-11!71;UBERON:0000073!1.88e-11!75;UBERON:0001016!1.88e-11!75;UBERON:0000033!3.21e-09!63;UBERON:0001049!2.05e-08!52;UBERON:0005068!2.05e-08!52;UBERON:0006241!2.05e-08!52;UBERON:0007135!2.05e-08!52;UBERON:0003056!1.21e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.44e-12,73;UBERON:0001016,1.51e-11,75;UBERON:0002346,1.90e-11,64;UBERON:0003075,1.90e-11,64;UBERON:0007284,1.90e-11,64;UBERON:0004121,2.94e-11,95;UBERON:0000924,2.94e-11,95;UBERON:0006601,2.94e-11,95;UBERON:0010371,5.65e-10,73;UBERON:0010314,1.48e-09,92;UBERON:0001049,1.92e-08,52;UBERON:0005068,1.92e-08,52;UBERON:0006241,1.92e-08,52;UBERON:0007135,1.92e-08,52;UBERON:0000073,3.96e-08,54;UBERON:0003056,1.47e-07,49 | |||
|phase1_expression=7.68714466103011,0.697950815278722,2.27499619694768,1.20985684522732,3.00537437967808,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0.42438965179803,1.7008658030214,5.36171136484781,6.00759515019551,0.639969691173627,1.14704640533585,0,0,1.07735616342945,0.950117097281869,1.51218077855958,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.332469290716985,1.22501613757421,0,0,0,0,0,0,3.14742044938943,4.1564541800001,4.03802854755699,1.56478268869608,3.70642765846759,1.97717564461025,1.36100929351998,1.95980990275508,2.87505128729943,0,0,0,0.771778308107841,1.71920063963254,1.03134418455488,22.0524942336962,19.5726662330652,15.8457850876545,3.04960078862219,1.77858959222228,0,0,0,4.19440154725767,6.14749288514487,13.9980976616445,13.6355997715008,13.2504725651371,4.85606673486466,5.96345060569357,25.6005770359254,26.357504530015,11.9498442259303,2.20231761998777,2.80912143787413,2.30409799884365,17.8046488435762,13.631658896759,11.9810075228055,3.07101298901519,1.68828783009504,2.44477196442896,6.18720029494702,5.12538050876771,9.31997229126503,0.227178579999552,1.73814588245607,0.869593466105033,0,0,0.539703191637817,0,0,0.421333260395256,2.21559419351475,1.55871602761721,2.12003744706204,6.61964072950398,1.28326477414318,0,0,0.432982082022428,1.01343946190039,0,0.11418387971906,0.258937883647172,2.52351636410202,4.3371331691534,3.95805121805784,2.30615497256059,1.50722640552623,2.70454026412121,1.0053327306374,0.247194967734374,3.90418263683761,1.76922110389975,0.647067399789637,1.10420759230197,0.484875253135222,1.86391761218122,2.63502717310392,4.60782754989601,1.78819938646014,2.75574786363617,1.79970819298022,2.41433431438823,5.84183493678809,2.28750301409313,8.16753288733619,2.60736480288415,1.53429274398198,5.40248915854856,4.38051410282946,2.13862664085664,1.8661045591514,0.252722758433675,1.89397670297827,12.2313216384941,7.35686734187113,9.18316862007281,6.78171680260718,11.838350852331,10.3772113430728,7.77724313845749,0.776110112217047,9.7005596819779,8.50977360755187,5.10258260075452,2.19195732427575,2.50242524303038,1.74126083261083,1.4404749548556,2.7864797354589,1.40442637462647,0.257347907114715,0.284163499395593,3.10688658803253,4.45599513964083,3.96136535214233,4.26140524053378,3.14822770795846,2.00547246753592,1.62773761325285,1.87791380979733,1.86824547787471,1.97471819896177,0.985004784474571,1.21603214318784,0.877199924551994,1.09775057645525,1.47627060636409,3.36463917702604,10.8049842998249,0,2.11560453330835,6.39864751605702,4.41249676534833,3.8660238396628,2.62188582010345,1.77902435075896,1.14135375667535,0.949058123089023,1.15289268306808,2.01068167040216,1.79060824837036,0.779856348476481,0.898819408654221,0.864552199498777,1.7922714592893,10.2420666514664,7.42615331963237,9.01661885384643,6.51684249105006,4.07300223052014,5.40045813155453,3.85742876457969,3.09981310757165,4.39596437955849,3.70191491765402,1.1858105083486,1.83529616287703,1.76903095601883,0.674586337154561,1.21716072833102,1.20588579876208,0.50925170356284,1.15078454980324,0.486405680325106,0.549122826376163,0,1.48856379067401,0.936113019343682,0.505157755894224,0.896987067609561,0.482443521363367,0.739012760666419,5.68474235311454,2.60743962307241,2.54617628662782,4.92849521405854,3.85264392116176,2.85652369063216,3.70753930929818,2.67979744980525,3.32197034473162,2.23236676120482,1.96635977658886,0.863424909329478,1.88043776155965,0,0,1.96705709207614,0.827810238914197,6.42202359951168,4.57125577709592,0.491804836130026,0.757412781613119,2.52406575533005,3.12350995437311,3.87762115919038,5.4962823529087,4.23317480756549,2.54768877709949,3.23848561339915,1.46127928955656,1.58115111178609,3.53453448063988,2.2710413633323,3.38324646967785,3.58351310577867,0.659880491890142,1.32745138339963,3.39892890616974,2.72091201268276,1.32023555829129,2.95301892880773,1.53717573971964,1.80899805217755,1.09060118843252,2.13898427030833,0.632073515871632,1.05418608574999,3.09406629744561,2.04263763452273,7.0223826672211,7.50280365939976,4.71541477069503,3.90148514013002,4.28085162244969,3.29098041204242,1.522324745573,1.40803024838226,0.42366414172764,1.10264199027481,0.49465875882444,1.61464426695906,2.35220407219808,1.43246812803764,0.984845398470368,0.582961673259701,5.00648315428376,1.02522528478712,6.3979929068599,2.77791791054568,1.69531611304222,1.36694227721025,0.228778173206523,7.64902934972349,3.49878630809145,4.69879910935041,1.90934123603023,8.38290382990009,2.43983360552218,2.70013352054503,2.29997125615916,1.09181281873089,0.809186078308924,1.07449492442937,1.04702376793612,1.29614973291793,1.86401793926078,1.12738587736838,3.88743019714345,2.31641886639937,3.30567020184881,1.6790777052105,2.36538575687089,2.8165737274981,7.16124116641726,16.0434796971338,3.8653459332161,2.88030006257865,1.58005560314089,2.22997736819181,1.84879722896689,1.16928740680016,3.04345382634718,3.77494574084403,2.88469078847925,2.51072196196781,1.81739609906666,3.27689268616499,1.71404514732629,1.26695244961678,1.44317762460494,1.16876902181569,0.906921534460845,0,0,0.167884616364078,0.965947970160952,0.375364950902364,0.183151624267265,0.643105137237198,1.00314420807073,1.6942555278512,1.38097570952153,0.572895513439397,1.54667864109319,1.37016503954128,1.5107877947794,1.35004500046361,1.35096360967266,0.453142408984205,1.55328093525546,11.3128208866753,21.1483182902546,10.7562171625105,6.07766792670735,3.77303692730368,2.20612210140017,2.22246727801615,2.47242068686673,3.85103051510178,3.79045817645696,4.56262739802432,3.39527414494937,2.24739617927718,3.39333307745807,2.75690250986944,4.76293691283074,2.66533949673168,1.54327376370964,2.06042950401653,3.38557516309114,3.77156177623957,2.48466128623072,3.57654284920981,3.19762116591123,3.57615645578256,2.70766745253365,2.19513567447327,2.36762740294059,2.30866993537965,2.80571135828869,2.37270036248348,2.36410757701352,2.45538625901814,2.63392630016142,4.82266527452853,9.242991383704,1.87145286756327,3.86767897286937,2.29545998482612,1.32354851471709,0.695603506861264 | |phase1_expression=7.68714466103011,0.697950815278722,2.27499619694768,1.20985684522732,3.00537437967808,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0.42438965179803,1.7008658030214,5.36171136484781,6.00759515019551,0.639969691173627,1.14704640533585,0,0,1.07735616342945,0.950117097281869,1.51218077855958,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.332469290716985,1.22501613757421,0,0,0,0,0,0,3.14742044938943,4.1564541800001,4.03802854755699,1.56478268869608,3.70642765846759,1.97717564461025,1.36100929351998,1.95980990275508,2.87505128729943,0,0,0,0.771778308107841,1.71920063963254,1.03134418455488,22.0524942336962,19.5726662330652,15.8457850876545,3.04960078862219,1.77858959222228,0,0,0,4.19440154725767,6.14749288514487,13.9980976616445,13.6355997715008,13.2504725651371,4.85606673486466,5.96345060569357,25.6005770359254,26.357504530015,11.9498442259303,2.20231761998777,2.80912143787413,2.30409799884365,17.8046488435762,13.631658896759,11.9810075228055,3.07101298901519,1.68828783009504,2.44477196442896,6.18720029494702,5.12538050876771,9.31997229126503,0.227178579999552,1.73814588245607,0.869593466105033,0,0,0.539703191637817,0,0,0.421333260395256,2.21559419351475,1.55871602761721,2.12003744706204,6.61964072950398,1.28326477414318,0,0,0.432982082022428,1.01343946190039,0,0.11418387971906,0.258937883647172,2.52351636410202,4.3371331691534,3.95805121805784,2.30615497256059,1.50722640552623,2.70454026412121,1.0053327306374,0.247194967734374,3.90418263683761,1.76922110389975,0.647067399789637,1.10420759230197,0.484875253135222,1.86391761218122,2.63502717310392,4.60782754989601,1.78819938646014,2.75574786363617,1.79970819298022,2.41433431438823,5.84183493678809,2.28750301409313,8.16753288733619,2.60736480288415,1.53429274398198,5.40248915854856,4.38051410282946,2.13862664085664,1.8661045591514,0.252722758433675,1.89397670297827,12.2313216384941,7.35686734187113,9.18316862007281,6.78171680260718,11.838350852331,10.3772113430728,7.77724313845749,0.776110112217047,9.7005596819779,8.50977360755187,5.10258260075452,2.19195732427575,2.50242524303038,1.74126083261083,1.4404749548556,2.7864797354589,1.40442637462647,0.257347907114715,0.284163499395593,3.10688658803253,4.45599513964083,3.96136535214233,4.26140524053378,3.14822770795846,2.00547246753592,1.62773761325285,1.87791380979733,1.86824547787471,1.97471819896177,0.985004784474571,1.21603214318784,0.877199924551994,1.09775057645525,1.47627060636409,3.36463917702604,10.8049842998249,0,2.11560453330835,6.39864751605702,4.41249676534833,3.8660238396628,2.62188582010345,1.77902435075896,1.14135375667535,0.949058123089023,1.15289268306808,2.01068167040216,1.79060824837036,0.779856348476481,0.898819408654221,0.864552199498777,1.7922714592893,10.2420666514664,7.42615331963237,9.01661885384643,6.51684249105006,4.07300223052014,5.40045813155453,3.85742876457969,3.09981310757165,4.39596437955849,3.70191491765402,1.1858105083486,1.83529616287703,1.76903095601883,0.674586337154561,1.21716072833102,1.20588579876208,0.50925170356284,1.15078454980324,0.486405680325106,0.549122826376163,0,1.48856379067401,0.936113019343682,0.505157755894224,0.896987067609561,0.482443521363367,0.739012760666419,5.68474235311454,2.60743962307241,2.54617628662782,4.92849521405854,3.85264392116176,2.85652369063216,3.70753930929818,2.67979744980525,3.32197034473162,2.23236676120482,1.96635977658886,0.863424909329478,1.88043776155965,0,0,1.96705709207614,0.827810238914197,6.42202359951168,4.57125577709592,0.491804836130026,0.757412781613119,2.52406575533005,3.12350995437311,3.87762115919038,5.4962823529087,4.23317480756549,2.54768877709949,3.23848561339915,1.46127928955656,1.58115111178609,3.53453448063988,2.2710413633323,3.38324646967785,3.58351310577867,0.659880491890142,1.32745138339963,3.39892890616974,2.72091201268276,1.32023555829129,2.95301892880773,1.53717573971964,1.80899805217755,1.09060118843252,2.13898427030833,0.632073515871632,1.05418608574999,3.09406629744561,2.04263763452273,7.0223826672211,7.50280365939976,4.71541477069503,3.90148514013002,4.28085162244969,3.29098041204242,1.522324745573,1.40803024838226,0.42366414172764,1.10264199027481,0.49465875882444,1.61464426695906,2.35220407219808,1.43246812803764,0.984845398470368,0.582961673259701,5.00648315428376,1.02522528478712,6.3979929068599,2.77791791054568,1.69531611304222,1.36694227721025,0.228778173206523,7.64902934972349,3.49878630809145,4.69879910935041,1.90934123603023,8.38290382990009,2.43983360552218,2.70013352054503,2.29997125615916,1.09181281873089,0.809186078308924,1.07449492442937,1.04702376793612,1.29614973291793,1.86401793926078,1.12738587736838,3.88743019714345,2.31641886639937,3.30567020184881,1.6790777052105,2.36538575687089,2.8165737274981,7.16124116641726,16.0434796971338,3.8653459332161,2.88030006257865,1.58005560314089,2.22997736819181,1.84879722896689,1.16928740680016,3.04345382634718,3.77494574084403,2.88469078847925,2.51072196196781,1.81739609906666,3.27689268616499,1.71404514732629,1.26695244961678,1.44317762460494,1.16876902181569,0.906921534460845,0,0,0.167884616364078,0.965947970160952,0.375364950902364,0.183151624267265,0.643105137237198,1.00314420807073,1.6942555278512,1.38097570952153,0.572895513439397,1.54667864109319,1.37016503954128,1.5107877947794,1.35004500046361,1.35096360967266,0.453142408984205,1.55328093525546,11.3128208866753,21.1483182902546,10.7562171625105,6.07766792670735,3.77303692730368,2.20612210140017,2.22246727801615,2.47242068686673,3.85103051510178,3.79045817645696,4.56262739802432,3.39527414494937,2.24739617927718,3.39333307745807,2.75690250986944,4.76293691283074,2.66533949673168,1.54327376370964,2.06042950401653,3.38557516309114,3.77156177623957,2.48466128623072,3.57654284920981,3.19762116591123,3.57615645578256,2.70766745253365,2.19513567447327,2.36762740294059,2.30866993537965,2.80571135828869,2.37270036248348,2.36410757701352,2.45538625901814,2.63392630016142,4.82266527452853,9.242991383704,1.87145286756327,3.86767897286937,2.29545998482612,1.32354851471709,0.695603506861264 | ||
|short_description=p2@Bahcc1 | |||
}} | }} |
Latest revision as of 02:45, 27 September 2015
Short description: | p2@Bahcc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Bahcc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 11bp_to_ENSMUST00000044985, ENSMUST00000122148, NM_198423, uc007msd.2, uc011yiy.1_5end |
EntrezGene: | Bahcc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.07e-10 | 33 |
neuronal stem cell | 1.07e-10 | 33 |
neuroblast | 1.07e-10 | 33 |
electrically signaling cell | 1.07e-10 | 33 |
CNS neuron (sensu Vertebrata) | 4.37e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.37e-10 | 23 |
ectodermal cell | 6.37e-10 | 44 |
neurectodermal cell | 6.37e-10 | 44 |
electrically responsive cell | 1.12e-09 | 39 |
electrically active cell | 1.12e-09 | 39 |
neural cell | 1.76e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.44e-12 | 73 |
nervous system | 1.51e-11 | 75 |
neurectoderm | 1.90e-11 | 64 |
neural plate | 1.90e-11 | 64 |
presumptive neural plate | 1.90e-11 | 64 |
ectoderm-derived structure | 2.94e-11 | 95 |
ectoderm | 2.94e-11 | 95 |
presumptive ectoderm | 2.94e-11 | 95 |
ecto-epithelium | 5.65e-10 | 73 |
structure with developmental contribution from neural crest | 1.48e-09 | 92 |
neural tube | 1.92e-08 | 52 |
neural rod | 1.92e-08 | 52 |
future spinal cord | 1.92e-08 | 52 |
neural keel | 1.92e-08 | 52 |
regional part of nervous system | 3.96e-08 | 54 |
pre-chordal neural plate | 1.47e-07 | 49 |