FFCP PHASE1:Mm9::chr11:54769726..54769742,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=292 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:54769726..54769742,+ | |||
|description=CAGE_peak_at_chr11:54769726..54769742,+ | |||
|id=chr11:54769726..54769742,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.72e-10!66;CL:0000988!5.25e-10!32;CL:0002032!5.25e-10!32;CL:0000037!5.25e-10!32;CL:0000566!5.25e-10!32;CL:0000837!5.25e-10!32;CL:0000838!2.76e-09!12;CL:0002563!9.55e-09!9;CL:0002251!9.55e-09!9;CL:0000084!9.94e-09!11;CL:0000827!9.94e-09!11;CL:0000542!3.30e-08!13;CL:0000051!3.30e-08!13;CL:0002031!5.14e-08!25;CL:0000791!6.10e-08!9;CL:0000789!6.10e-08!9;CL:0002420!6.10e-08!9;CL:0002419!6.10e-08!9;CL:0000790!6.10e-08!9;CL:0000624!4.93e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.05e-24,9;CL:0002251,1.05e-24,9;CL:0000239,9.70e-18,6;CL:0000677,9.70e-18,6;CL:0000584,9.70e-18,6;CL:0000066,9.40e-17,25;CL:0000075,4.14e-15,7;CL:0002076,3.50e-14,15;CL:0000223,7.36e-13,20;CL:0000791,5.64e-12,9;CL:0000789,5.64e-12,9;CL:0002420,5.64e-12,9;CL:0002419,5.64e-12,9;CL:0000790,5.64e-12,9;CL:0000084,1.15e-09,11;CL:0000827,1.15e-09,11;CL:0000624,1.77e-09,8;CL:0000988,5.04e-09,32;CL:0002032,5.04e-09,32;CL:0000037,5.04e-09,32;CL:0000837,5.04e-09,32;CL:0000838,8.49e-09,12;CL:0002250,1.48e-08,3;CL:0000682,1.48e-08,3;CL:0000542,4.60e-08,13;CL:0000051,4.60e-08,13;CL:0000738,8.53e-08,17;CL:0002087,8.53e-08,17;CL:0002320,6.88e-07,46;CL:0000134,6.88e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!7.95e-09!13;UBERON:0000060!7.95e-09!13;UBERON:0001262!7.95e-09!13;UBERON:0004786!7.95e-09!13;UBERON:0003350!9.55e-09!9;UBERON:0004808!9.55e-09!9;UBERON:0001277!9.55e-09!9;UBERON:0000344!2.59e-08!15;UBERON:0003408!3.08e-08!24;UBERON:0002193!9.08e-08!48;UBERON:0002370!1.01e-07!23;UBERON:0000974!1.01e-07!23;UBERON:0004807!1.01e-07!23;UBERON:0005058!1.01e-07!23;UBERON:0003351!1.01e-07!23;UBERON:0009113!1.01e-07!23;UBERON:0003295!1.01e-07!23;UBERON:0009722!1.01e-07!23;UBERON:0005562!1.01e-07!23;UBERON:0007690!1.01e-07!23;UBERON:0002390!2.44e-07!45;UBERON:0003061!2.44e-07!45;UBERON:0006562!3.90e-07!24;UBERON:0001557!3.90e-07!24;UBERON:0001042!3.90e-07!24;UBERON:0008814!3.90e-07!24;UBERON:0009145!3.90e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.05e-24,9;UBERON:0004808,1.05e-24,9;UBERON:0001277,1.05e-24,9;UBERON:0001242,3.17e-20,13;UBERON:0001262,3.17e-20,13;UBERON:0004786,3.17e-20,13;UBERON:0000485,6.34e-20,11;UBERON:0000344,2.82e-17,15;UBERON:0004923,4.29e-10,24;UBERON:0003929,4.58e-10,55;UBERON:0000160,5.15e-09,31;UBERON:0000490,8.00e-08,66;UBERON:0005911,2.45e-07,69;UBERON:0002384,6.88e-07,46 | |||
|phase1_expression=0,2.79180326111489,4.54999239389536,2.72217790176147,3.00537437967808,2.35030980676646,2.80335168714631,16.9151553708465,0.703943610758334,1.63845168425395,0.513653904676515,0.239316476986009,7.36163138704185,7.60557501045277,0.333109761815663,0,0,0.315462165358238,0.959801035240171,0.42438965179803,0.255129870453209,0.595745707205312,0.261199789138935,0.47997726838022,0,1.72269589234506,1.29228598847722,1.939241094173,0,0.252030129759931,1.10865255327652,0.635030673459631,0.61506478758457,0,1.44425809875637,1.32987716286794,2.24586291888606,0.418531630736908,0.7813353445238,0,0.588231488031014,0.683045484958446,0.485510353031154,0.503587271902309,0.304130793658544,0,0,0,0,0,0,0,0.671130424230945,5.80289713609076,9.74672017513146,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0,0.151452386666368,0,8.40607017234866,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,1.86391761218122,0,0,0,1.67741174308288,0.599902730993408,2.03312363316904,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,1.80143534980301,3.40996199274711,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,1.08781136763742,0,0,0,0.234423373184406,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0.49465875882444,0.161464426695906,0,0,0,0,0.18542530201051,0.170870880797853,0,0.185194527369712,0,0,0,2.71965487990169,1.95932033253121,1.79659965945751,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0.2604087696879,0,0.241584120826006,0,0.948033361884535,0,0,0.129920822977795,0.716106782669926,0.993406773906324,0.480781798079875,0.886137163047463,1.51449674922221,0.990688486514998,0.907435666231565,0.194915761479505,1.6356013078856,2.10378423926824,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,2.79180326111489,4.54999239389536,2.72217790176147,3.00537437967808,2.35030980676646,2.80335168714631,16.9151553708465,0.703943610758334,1.63845168425395,0.513653904676515,0.239316476986009,7.36163138704185,7.60557501045277,0.333109761815663,0,0,0.315462165358238,0.959801035240171,0.42438965179803,0.255129870453209,0.595745707205312,0.261199789138935,0.47997726838022,0,1.72269589234506,1.29228598847722,1.939241094173,0,0.252030129759931,1.10865255327652,0.635030673459631,0.61506478758457,0,1.44425809875637,1.32987716286794,2.24586291888606,0.418531630736908,0.7813353445238,0,0.588231488031014,0.683045484958446,0.485510353031154,0.503587271902309,0.304130793658544,0,0,0,0,0,0,0,0.671130424230945,5.80289713609076,9.74672017513146,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0,0.151452386666368,0,8.40607017234866,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,1.86391761218122,0,0,0,1.67741174308288,0.599902730993408,2.03312363316904,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,1.80143534980301,3.40996199274711,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,1.08781136763742,0,0,0,0.234423373184406,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0.49465875882444,0.161464426695906,0,0,0,0,0.18542530201051,0.170870880797853,0,0.185194527369712,0,0,0,2.71965487990169,1.95932033253121,1.79659965945751,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0.2604087696879,0,0.241584120826006,0,0.948033361884535,0,0,0.129920822977795,0.716106782669926,0.993406773906324,0.480781798079875,0.886137163047463,1.51449674922221,0.990688486514998,0.907435666231565,0.194915761479505,1.6356013078856,2.10378423926824,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr11:54769726..54769742,+ | |||
}} | }} |
Latest revision as of 02:46, 6 August 2015
Short description: | p@chr11:54769726..54769742, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:54769726..54769742, + |
Coexpression cluster: | MCL_coexpression_mm9:292 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.05e-24 | 9 |
epithelial cell of alimentary canal | 1.05e-24 | 9 |
brush border epithelial cell | 9.70e-18 | 6 |
gut absorptive cell | 9.70e-18 | 6 |
enterocyte | 9.70e-18 | 6 |
epithelial cell | 9.40e-17 | 25 |
columnar/cuboidal epithelial cell | 4.14e-15 | 7 |
endo-epithelial cell | 3.50e-14 | 15 |
endodermal cell | 7.36e-13 | 20 |
mature alpha-beta T cell | 5.64e-12 | 9 |
alpha-beta T cell | 5.64e-12 | 9 |
immature T cell | 5.64e-12 | 9 |
mature T cell | 5.64e-12 | 9 |
immature alpha-beta T cell | 5.64e-12 | 9 |
T cell | 1.15e-09 | 11 |
pro-T cell | 1.15e-09 | 11 |
CD4-positive, alpha-beta T cell | 1.77e-09 | 8 |
hematopoietic cell | 5.04e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.04e-09 | 32 |
hematopoietic stem cell | 5.04e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.04e-09 | 32 |
lymphoid lineage restricted progenitor cell | 8.49e-09 | 12 |
intestinal crypt stem cell | 1.48e-08 | 3 |
M cell of gut | 1.48e-08 | 3 |
lymphocyte | 4.60e-08 | 13 |
common lymphoid progenitor | 4.60e-08 | 13 |
leukocyte | 8.53e-08 | 17 |
nongranular leukocyte | 8.53e-08 | 17 |
connective tissue cell | 6.88e-07 | 46 |
mesenchymal cell | 6.88e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.05e-24 | 9 |
gastrointestinal system epithelium | 1.05e-24 | 9 |
intestinal epithelium | 1.05e-24 | 9 |
intestinal mucosa | 3.17e-20 | 13 |
wall of intestine | 3.17e-20 | 13 |
gastrointestinal system mucosa | 3.17e-20 | 13 |
simple columnar epithelium | 6.34e-20 | 11 |
mucosa | 2.82e-17 | 15 |
organ component layer | 4.29e-10 | 24 |
gut epithelium | 4.58e-10 | 55 |
intestine | 5.15e-09 | 31 |
unilaminar epithelium | 8.00e-08 | 66 |
endo-epithelium | 2.45e-07 | 69 |
connective tissue | 6.88e-07 | 46 |