FFCP PHASE1:Mm9::chr11:92960979..92960990,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr11:92960979..92960990,+ to FFCP PHASE1:Mm9::chr11:92960979..92960990,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72605 | |EntrezGene=72605 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=Q78UF4,P61215,Q3V1V7 | |UniProt=Q78UF4,P61215,Q3V1V7 | ||
|association_with_transcript=375bp_to_ENSMUST00000092780,ENSMUST00000107863,NM_028296,uc007kxj.2_5end | |||
|cluster_id=chr11:92960979..92960990,+ | |||
|description=CAGE_peak_9_at_Car10_5end | |||
|id=chr11:92960979..92960990,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.77e-10!23;CL:0000337!5.77e-10!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.85e-21!63;UBERON:0002346!2.34e-19!71;UBERON:0003075!2.34e-19!71;UBERON:0007284!2.34e-19!71;UBERON:0001017!7.21e-19!73;UBERON:0005743!7.21e-19!73;UBERON:0001049!8.93e-19!52;UBERON:0005068!8.93e-19!52;UBERON:0006241!8.93e-19!52;UBERON:0007135!8.93e-19!52;UBERON:0004121!2.07e-18!102;UBERON:0000924!2.07e-18!102;UBERON:0006601!2.07e-18!102;UBERON:0000073!4.03e-18!75;UBERON:0001016!4.03e-18!75;UBERON:0000955!3.58e-16!50;UBERON:0006238!3.58e-16!50;UBERON:0002616!5.46e-15!49;UBERON:0003076!3.65e-14!12;UBERON:0003057!3.65e-14!12;UBERON:0003056!5.94e-13!49;UBERON:0007811!7.31e-13!86;UBERON:0002020!1.93e-12!34;UBERON:0000153!4.74e-11!94;UBERON:0002240!7.25e-11!6;UBERON:0005174!7.25e-11!6;UBERON:0001137!7.25e-11!6;UBERON:0001948!3.87e-09!5;UBERON:0002315!3.87e-09!5;UBERON:0003080!1.31e-08!40;UBERON:0002780!1.11e-07!39;UBERON:0001890!1.11e-07!39;UBERON:0006240!1.11e-07!39;UBERON:0002298!2.51e-07!6;UBERON:0002791!3.06e-07!29;UBERON:0003528!3.06e-07!29;UBERON:0001893!3.06e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,3.36e-12,12;UBERON:0003057,3.36e-12,12;UBERON:0002346,9.81e-11,64;UBERON:0003075,9.81e-11,64;UBERON:0007284,9.81e-11,64;UBERON:0001049,1.68e-10,52;UBERON:0005068,1.68e-10,52;UBERON:0006241,1.68e-10,52;UBERON:0007135,1.68e-10,52;UBERON:0002037,4.16e-10,4;UBERON:0002680,4.16e-10,4;UBERON:0001895,4.16e-10,4;UBERON:0010092,4.16e-10,4;UBERON:0006215,4.16e-10,4;UBERON:0000073,4.81e-10,54;UBERON:0010371,2.40e-09,73;UBERON:0001017,2.73e-09,73;UBERON:0001016,4.99e-09,75;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0010314,2.71e-07,92;UBERON:0004733,4.99e-07,6;UBERON:0004732,4.99e-07,6;UBERON:0002028,4.99e-07,6;UBERON:0007277,4.99e-07,6;UBERON:0002616,7.50e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,1.10434270475807,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0,0.365950574409639,0,0.558365998002762,0,0.30559649555362,0.589257170947335,0.711858403995515,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,6.14839673724249,4.1889341362691,0,0,0,0,0.898743836428936,0.457500602818626,0,0.869121600961382,0.767146371990992,1.24672826735736,0.162241263067758,0,0,0,0.631325567659422,0,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0,0,0.171853182343688,0,0.755393897389701,0,0.900642406448441,1.35942722695261,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,1.10434270475807,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0,0.365950574409639,0,0.558365998002762,0,0.30559649555362,0.589257170947335,0.711858403995515,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,6.14839673724249,4.1889341362691,0,0,0,0,0.898743836428936,0.457500602818626,0,0.869121600961382,0.767146371990992,1.24672826735736,0.162241263067758,0,0,0,0.631325567659422,0,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0,0,0.171853182343688,0,0.755393897389701,0,0.900642406448441,1.35942722695261,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p9@Car10 | |||
}} | }} |
Latest revision as of 23:21, 25 September 2015
Short description: | p9@Car10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Car10_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 375bp_to_ENSMUST00000092780, ENSMUST00000107863, NM_028296, uc007kxj.2_5end |
EntrezGene: | Car10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 3.36e-12 | 12 |
chordal neural plate | 3.36e-12 | 12 |
neurectoderm | 9.81e-11 | 64 |
neural plate | 9.81e-11 | 64 |
presumptive neural plate | 9.81e-11 | 64 |
neural tube | 1.68e-10 | 52 |
neural rod | 1.68e-10 | 52 |
future spinal cord | 1.68e-10 | 52 |
neural keel | 1.68e-10 | 52 |
cerebellum | 4.16e-10 | 4 |
regional part of metencephalon | 4.16e-10 | 4 |
metencephalon | 4.16e-10 | 4 |
future metencephalon | 4.16e-10 | 4 |
rhombic lip | 4.16e-10 | 4 |
regional part of nervous system | 4.81e-10 | 54 |
ecto-epithelium | 2.40e-09 | 73 |
central nervous system | 2.73e-09 | 73 |
nervous system | 4.99e-09 | 75 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
structure with developmental contribution from neural crest | 2.71e-07 | 92 |
segmental subdivision of hindbrain | 4.99e-07 | 6 |
segmental subdivision of nervous system | 4.99e-07 | 6 |
hindbrain | 4.99e-07 | 6 |
presumptive hindbrain | 4.99e-07 | 6 |
regional part of brain | 7.50e-07 | 46 |