FFCP PHASE1:Mm9::chr16:34574007..34574022,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=545156 | |EntrezGene=545156 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=A2CG49 | |UniProt=A2CG49 | ||
|association_with_transcript=-389bp_to_ENSMUST00000114961_5end | |||
|cluster_id=chr16:34574007..34574022,- | |||
|description=CAGE_peak_12_at_Kalrn_5end | |||
|id=chr16:34574007..34574022,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.69e-11!34;UBERON:0003056!1.10e-10!49;UBERON:0002791!1.22e-09!29;UBERON:0003528!1.22e-09!29;UBERON:0001893!1.22e-09!29;UBERON:0003080!1.49e-09!40;UBERON:0002780!3.35e-09!39;UBERON:0001890!3.35e-09!39;UBERON:0006240!3.35e-09!39;UBERON:0002021!4.03e-09!10;UBERON:0000411!4.03e-09!10;UBERON:0001950!4.03e-09!10;UBERON:0000033!7.88e-09!63;UBERON:0001017!1.97e-08!73;UBERON:0005743!1.97e-08!73;UBERON:0004121!2.41e-08!102;UBERON:0000924!2.41e-08!102;UBERON:0006601!2.41e-08!102;UBERON:0002346!2.54e-08!71;UBERON:0003075!2.54e-08!71;UBERON:0007284!2.54e-08!71;UBERON:0000956!3.01e-08!21;UBERON:0001869!3.01e-08!21;UBERON:0000203!3.01e-08!21;UBERON:0000955!3.05e-08!50;UBERON:0006238!3.05e-08!50;UBERON:0001049!4.42e-08!52;UBERON:0005068!4.42e-08!52;UBERON:0006241!4.42e-08!52;UBERON:0007135!4.42e-08!52;UBERON:0002616!8.79e-08!49;UBERON:0000073!9.51e-08!75;UBERON:0001016!9.51e-08!75;UBERON:0002619!1.21e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.56e-43,10;UBERON:0000411,2.56e-43,10;UBERON:0001950,2.56e-43,10;UBERON:0000956,1.35e-25,21;UBERON:0001869,1.35e-25,21;UBERON:0000203,1.35e-25,21;UBERON:0002619,2.80e-25,17;UBERON:0003528,2.49e-18,29;UBERON:0002791,2.49e-18,29;UBERON:0001893,2.49e-18,29;UBERON:0002020,1.62e-15,34;UBERON:0002780,2.01e-13,39;UBERON:0001890,2.01e-13,39;UBERON:0006240,2.01e-13,39;UBERON:0003080,4.57e-13,40;UBERON:0000073,1.14e-11,54;UBERON:0002616,3.00e-11,46;UBERON:0000955,5.43e-11,47;UBERON:0006238,5.43e-11,47;UBERON:0003056,1.66e-10,49;UBERON:0001017,3.57e-10,73;UBERON:0001016,7.16e-10,75;UBERON:0001049,7.55e-10,52;UBERON:0005068,7.55e-10,52;UBERON:0006241,7.55e-10,52;UBERON:0007135,7.55e-10,52;UBERON:0001851,1.56e-08,1;UBERON:0005889,1.56e-08,1;UBERON:0002346,7.93e-08,64;UBERON:0003075,7.93e-08,64;UBERON:0007284,7.93e-08,64;UBERON:0004121,1.54e-07,95;UBERON:0000924,1.54e-07,95;UBERON:0006601,1.54e-07,95;UBERON:0010371,9.64e-07,73 | |||
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| ||
|short_description=p12@Kalrn | |||
}} | }} |
Latest revision as of 22:23, 1 October 2015
Short description: | p12@Kalrn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Kalrn_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -389bp_to_ENSMUST00000114961_5end |
EntrezGene: | Kalrn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.56e-43 | 10 |
visual cortex | 2.56e-43 | 10 |
neocortex | 2.56e-43 | 10 |
cerebral cortex | 1.35e-25 | 21 |
cerebral hemisphere | 1.35e-25 | 21 |
pallium | 1.35e-25 | 21 |
regional part of cerebral cortex | 2.80e-25 | 17 |
brain grey matter | 2.49e-18 | 29 |
regional part of telencephalon | 2.49e-18 | 29 |
telencephalon | 2.49e-18 | 29 |
gray matter | 1.62e-15 | 34 |
regional part of forebrain | 2.01e-13 | 39 |
forebrain | 2.01e-13 | 39 |
future forebrain | 2.01e-13 | 39 |
anterior neural tube | 4.57e-13 | 40 |
regional part of nervous system | 1.14e-11 | 54 |
regional part of brain | 3.00e-11 | 46 |
brain | 5.43e-11 | 47 |
future brain | 5.43e-11 | 47 |
pre-chordal neural plate | 1.66e-10 | 49 |
central nervous system | 3.57e-10 | 73 |
nervous system | 7.16e-10 | 75 |
neural tube | 7.55e-10 | 52 |
neural rod | 7.55e-10 | 52 |
future spinal cord | 7.55e-10 | 52 |
neural keel | 7.55e-10 | 52 |
cortex | 1.56e-08 | 1 |
zygote cortex | 1.56e-08 | 1 |
neurectoderm | 7.93e-08 | 64 |
neural plate | 7.93e-08 | 64 |
presumptive neural plate | 7.93e-08 | 64 |
ectoderm-derived structure | 1.54e-07 | 95 |
ectoderm | 1.54e-07 | 95 |
presumptive ectoderm | 1.54e-07 | 95 |
ecto-epithelium | 9.64e-07 | 73 |