FFCP PHASE1:Mm9::chr16:91931888..91931899,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:91931888..91931899,- to FFCP PHASE1:Mm9::chr16:91931888..91931899,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=28080 | |EntrezGene=28080 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3070 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DB20 | |UniProt=Q9DB20 | ||
|association_with_transcript=-13bp_to_NM_138597,uc007zys.1_5end | |||
|cluster_id=chr16:91931888..91931899,- | |||
|description=CAGE_peak_2_at_Atp5o_5end | |||
|id=chr16:91931888..91931899,- | |||
|ontology_enrichment_celltype=CL:0000117!8.25e-10!23;CL:0000337!8.25e-10!23;CL:0002319!2.47e-09!43;CL:0000221!7.89e-09!44;CL:0000133!7.89e-09!44;CL:0000055!9.54e-08!50;CL:0000540!8.03e-07!33;CL:0000047!8.03e-07!33;CL:0000031!8.03e-07!33;CL:0000404!8.03e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.00e-10,23;CL:0000337,8.00e-10,23;CL:0002319,2.40e-09,43;CL:0000221,7.68e-09,44;CL:0000133,7.68e-09,44;CL:0000540,7.87e-07,33;CL:0000047,7.87e-07,33;CL:0000031,7.87e-07,33;CL:0000404,7.87e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.77e-13!75;UBERON:0001016!6.77e-13!75;UBERON:0001017!7.07e-13!73;UBERON:0005743!7.07e-13!73;UBERON:0002020!5.32e-12!34;UBERON:0001049!3.21e-10!52;UBERON:0005068!3.21e-10!52;UBERON:0006241!3.21e-10!52;UBERON:0007135!3.21e-10!52;UBERON:0002791!3.86e-09!29;UBERON:0003528!3.86e-09!29;UBERON:0001893!3.86e-09!29;UBERON:0000955!9.53e-09!50;UBERON:0006238!9.53e-09!50;UBERON:0002616!9.92e-09!49;UBERON:0000956!5.76e-07!21;UBERON:0001869!5.76e-07!21;UBERON:0000203!5.76e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.85e-13,75;UBERON:0001017,7.16e-13,73;UBERON:0002020,5.11e-12,34;UBERON:0000073,2.88e-11,54;UBERON:0001049,3.29e-10,52;UBERON:0005068,3.29e-10,52;UBERON:0006241,3.29e-10,52;UBERON:0007135,3.29e-10,52;UBERON:0010314,1.10e-09,92;UBERON:0003528,3.76e-09,29;UBERON:0002791,3.76e-09,29;UBERON:0001893,3.76e-09,29;UBERON:0000955,2.68e-07,47;UBERON:0006238,2.68e-07,47;UBERON:0002616,2.84e-07,46;UBERON:0002346,5.16e-07,64;UBERON:0003075,5.16e-07,64;UBERON:0007284,5.16e-07,64;UBERON:0000956,5.64e-07,21;UBERON:0001869,5.64e-07,21;UBERON:0000203,5.64e-07,21 | |||
|phase1_expression=1.12104192973356,2.44282785347553,0.909998478779072,3.0246421130683,4.50806156951712,2.35030980676646,1.86890112476421,0.387369970324729,0.281577444303333,0.234064526321993,0.856089841127525,1.67521533890206,0.171200729931206,0,1.66554880907831,2.83465374345756,3.49780939064073,0.630924330716475,0.548457734422955,0.84877930359606,4.16712121740242,1.09220046320974,0.522399578277871,4.31979541542198,3.67054849707472,6.31655160526522,3.87685796543167,4.30942465371778,4.3705386474966,1.51218077855958,2.88249663851896,5.71527606113668,1.23012957516914,0,3.75507105676657,2.49351968037739,2.6542016314108,1.25559489221072,3.906676722619,2.61761871986899,2.35292595212406,0.683045484958446,2.42755176515577,1.25896817975577,1.82478476195126,1.83546752161682,3.9119567217402,7.63088047331563,4.39372365468944,3.30530828426282,6.29938897314131,14.3752564364972,0.503347818173209,0,0,3.34437266846731,4.01146815914259,1.54701627683233,6.67644320836673,5.81890077199236,6.33831403506179,10.8430250262122,2.66788438833342,1.7997994345628,5.93319817540185,1.4209602298922,4.79360176829448,6.91592949578798,3.31806759387129,4.18518408828241,3.78584930432488,9.99778445413313,15.9025349485162,3.91970557487853,3.35459148563827,4.5960939330501,9.91042928994498,8.17198963745201,11.2132769277058,4.61602007055678,2.56165402086747,4.68822033501084,17.8677119360884,12.9435400307286,7.33431589328689,7.66034322231536,8.39992916714707,7.45597783301202,3.63485727999283,2.49386148352392,0.869593466105033,2.58127163094416,3.39985666853875,5.39703191637817,1.94932925234301,2.68816132258401,2.10666630197628,1.36344258062446,2.59786004602869,4.59341446863442,1.54927761754349,0,0,7.11066703153331,4.32982082022428,5.32055717497707,4.54972000513305,2.2836775943812,1.03575153458869,1.33597925158342,2.08182392119363,3.65358573974569,2.99800146432876,1.80867168663147,1.99900802130698,2.01066546127481,2.47194967734374,3.7595832799177,0.884610551949874,3.39710384889559,2.65009822152472,3.39412677194655,1.86391761218122,2.04946557908083,2.30391377494801,3.0654846625031,2.27648736561249,2.39961092397363,2.1601938602421,5.99162557619291,4.57500602818627,3.01570445070875,5.21472960576829,3.83573185995496,7.2725815595846,5.19172041816825,1.01839363850316,1.7416975885413,1.0108910337347,1.47309299120532,2.21204753036596,2.5289231487682,1.62055916824814,2.10986744970001,1.02054748726992,0.640568601424249,1.68663104207512,1.81092359517311,3.44908788692548,2.08016688184601,2.46331573829528,1.31517439456545,2.22437799380478,0.696504333044333,0.205782136407943,2.18937693500343,3.51106593656617,2.31613116403244,3.12579849335152,4.14251545071004,8.67746421930056,8.64297895012871,4.97163944728941,6.09969118416952,6.32495162838251,4.88321283975857,8.04820204198858,6.889155199663,4.27855609775049,7.55170334763838,5.91802309684747,5.84799949701329,5.48875288227627,5.77087600669599,5.04695876553905,4.32199371992995,3.30418782983798,3.96675849995316,2.55945900642281,3.0190767341857,3.22168653305233,1.81515172161008,3.11329261382818,3.23383564391351,4.2707615539006,2.47048432086016,1.75934646160189,1.39269530428806,0.779856348476481,3.59527763461689,2.80979464837102,3.58454291857861,2.46568271239006,1.82797620175566,4.50830942692322,2.24016460629846,2.90928730751439,1.68325967736765,1.70738650235495,2.06654207171443,2.66897837330337,3.20832626196681,2.37162101669719,1.83529616287703,1.96558995113203,1.79889689907883,1.42002084971952,2.17059443777175,2.03700681425136,2.87696137450811,2.2698931748505,3.29473695825698,0,1.86070473834252,1.5601883655728,0.757736633841335,2.33216637578486,1.4473305640901,1.29327233116623,3.7898282354097,1.95557971730431,2.37643120085263,2.81628297946203,1.17254380209271,1.19021820443007,0.195133647857799,1.10344600874334,0.8858587585951,0.318909537314974,0.81931657357869,0.518054945597687,0.578596234326046,1.50791283939272,7.07077388964322,1.96705709207614,0.827810238914197,10.7568895291821,12.3072270921813,2.13115428989678,4.54447668967871,3.47059041357882,3.51394869866975,2.15423397732799,3.34556317133573,1.78238939265915,3.67999490025482,1.61924280669958,2.33804686329049,1.58115111178609,3.21321316421807,0.567760340833074,1.6025904330053,0.977321756121456,0.164970122972535,1.32745138339963,3.39892890616974,2.41858845571801,4.71512699389745,1.77181135728464,2.76691633149535,0.516856586336442,1.09060118843252,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,1.02131881726136,1.08036656418786,2.32845630808958,1.28602221018955,0.709360934569094,2.49716344642899,1.15184314421485,1.8267896946876,6.8054795338476,3.81297727554876,1.10264199027481,1.15420377059036,1.29171541356724,1.68876189798836,1.90995750405018,0.656563598980245,1.45740418314925,10.7546675166096,1.19609616558497,1.44470807574256,2.22233432843654,2.82552685507037,1.77702496037333,1.83022538565218,0.849892149969277,1.11961161858926,0.829199842826543,6.68269432610579,2.05618395827738,2.43983360552218,1.72808545314882,2.29997125615916,3.05707589244649,1.61837215661785,1.48776220305605,2.09404753587224,2.46268449254406,1.24267862617385,28.1846469342095,2.24274819065968,2.97825282822776,1.94451188344048,2.58319646955462,2.53434188236167,1.99507305697782,2.73429208172295,1.99232754408851,9.90494895386625,12.3852902690882,1.26404448251271,3.64905387522296,2.05421914329655,1.68897069871134,1.61124026100733,2.18549490259391,1.68273629327956,0.886137163047463,2.52416124870369,1.447929326445,0.806609481094724,1.16949456887703,1.25075394132428,1.05189211963412,1.13365191807606,7.5475224147182,3.40912655116008,6.04384618910682,0.772758376128762,1.50145980360946,1.09890974560359,1.07184189539533,0.501572104035363,4.51801474093653,4.60325236507177,9.16632821503035,6.70227411140382,5.48066015816514,6.7985450765073,8.10027000278167,5.85417564191487,6.34399372577886,5.1776031175182,2.17953429926771,1.99512436700516,2.56100408631201,1.94485373654635,4.19226325255965,3.30918315210025,4.66718128383392,3.09052585858341,2.24643446714271,6.06473308233114,2.5347929989024,4.52703219326583,5.15028291084353,3.39333307745807,4.82457939227151,5.23923060411381,3.24476112645595,3.08654752741928,3.70877310722976,3.23837624295674,3.77156177623957,6.74408063405482,3.09967046931517,5.23247099876383,4.89368778159719,4.23073039458383,3.10977553883713,5.5244639401947,3.66671107383827,5.05028044491965,4.74540072496697,3.25064791839359,7.36615877705441,5.11291575913688,4.05103883060397,2.74791635731741,3.27504251823572,1.93383948643468,6.69509162240952,3.52946270591225,5.56482805489012 | |phase1_expression=1.12104192973356,2.44282785347553,0.909998478779072,3.0246421130683,4.50806156951712,2.35030980676646,1.86890112476421,0.387369970324729,0.281577444303333,0.234064526321993,0.856089841127525,1.67521533890206,0.171200729931206,0,1.66554880907831,2.83465374345756,3.49780939064073,0.630924330716475,0.548457734422955,0.84877930359606,4.16712121740242,1.09220046320974,0.522399578277871,4.31979541542198,3.67054849707472,6.31655160526522,3.87685796543167,4.30942465371778,4.3705386474966,1.51218077855958,2.88249663851896,5.71527606113668,1.23012957516914,0,3.75507105676657,2.49351968037739,2.6542016314108,1.25559489221072,3.906676722619,2.61761871986899,2.35292595212406,0.683045484958446,2.42755176515577,1.25896817975577,1.82478476195126,1.83546752161682,3.9119567217402,7.63088047331563,4.39372365468944,3.30530828426282,6.29938897314131,14.3752564364972,0.503347818173209,0,0,3.34437266846731,4.01146815914259,1.54701627683233,6.67644320836673,5.81890077199236,6.33831403506179,10.8430250262122,2.66788438833342,1.7997994345628,5.93319817540185,1.4209602298922,4.79360176829448,6.91592949578798,3.31806759387129,4.18518408828241,3.78584930432488,9.99778445413313,15.9025349485162,3.91970557487853,3.35459148563827,4.5960939330501,9.91042928994498,8.17198963745201,11.2132769277058,4.61602007055678,2.56165402086747,4.68822033501084,17.8677119360884,12.9435400307286,7.33431589328689,7.66034322231536,8.39992916714707,7.45597783301202,3.63485727999283,2.49386148352392,0.869593466105033,2.58127163094416,3.39985666853875,5.39703191637817,1.94932925234301,2.68816132258401,2.10666630197628,1.36344258062446,2.59786004602869,4.59341446863442,1.54927761754349,0,0,7.11066703153331,4.32982082022428,5.32055717497707,4.54972000513305,2.2836775943812,1.03575153458869,1.33597925158342,2.08182392119363,3.65358573974569,2.99800146432876,1.80867168663147,1.99900802130698,2.01066546127481,2.47194967734374,3.7595832799177,0.884610551949874,3.39710384889559,2.65009822152472,3.39412677194655,1.86391761218122,2.04946557908083,2.30391377494801,3.0654846625031,2.27648736561249,2.39961092397363,2.1601938602421,5.99162557619291,4.57500602818627,3.01570445070875,5.21472960576829,3.83573185995496,7.2725815595846,5.19172041816825,1.01839363850316,1.7416975885413,1.0108910337347,1.47309299120532,2.21204753036596,2.5289231487682,1.62055916824814,2.10986744970001,1.02054748726992,0.640568601424249,1.68663104207512,1.81092359517311,3.44908788692548,2.08016688184601,2.46331573829528,1.31517439456545,2.22437799380478,0.696504333044333,0.205782136407943,2.18937693500343,3.51106593656617,2.31613116403244,3.12579849335152,4.14251545071004,8.67746421930056,8.64297895012871,4.97163944728941,6.09969118416952,6.32495162838251,4.88321283975857,8.04820204198858,6.889155199663,4.27855609775049,7.55170334763838,5.91802309684747,5.84799949701329,5.48875288227627,5.77087600669599,5.04695876553905,4.32199371992995,3.30418782983798,3.96675849995316,2.55945900642281,3.0190767341857,3.22168653305233,1.81515172161008,3.11329261382818,3.23383564391351,4.2707615539006,2.47048432086016,1.75934646160189,1.39269530428806,0.779856348476481,3.59527763461689,2.80979464837102,3.58454291857861,2.46568271239006,1.82797620175566,4.50830942692322,2.24016460629846,2.90928730751439,1.68325967736765,1.70738650235495,2.06654207171443,2.66897837330337,3.20832626196681,2.37162101669719,1.83529616287703,1.96558995113203,1.79889689907883,1.42002084971952,2.17059443777175,2.03700681425136,2.87696137450811,2.2698931748505,3.29473695825698,0,1.86070473834252,1.5601883655728,0.757736633841335,2.33216637578486,1.4473305640901,1.29327233116623,3.7898282354097,1.95557971730431,2.37643120085263,2.81628297946203,1.17254380209271,1.19021820443007,0.195133647857799,1.10344600874334,0.8858587585951,0.318909537314974,0.81931657357869,0.518054945597687,0.578596234326046,1.50791283939272,7.07077388964322,1.96705709207614,0.827810238914197,10.7568895291821,12.3072270921813,2.13115428989678,4.54447668967871,3.47059041357882,3.51394869866975,2.15423397732799,3.34556317133573,1.78238939265915,3.67999490025482,1.61924280669958,2.33804686329049,1.58115111178609,3.21321316421807,0.567760340833074,1.6025904330053,0.977321756121456,0.164970122972535,1.32745138339963,3.39892890616974,2.41858845571801,4.71512699389745,1.77181135728464,2.76691633149535,0.516856586336442,1.09060118843252,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,1.02131881726136,1.08036656418786,2.32845630808958,1.28602221018955,0.709360934569094,2.49716344642899,1.15184314421485,1.8267896946876,6.8054795338476,3.81297727554876,1.10264199027481,1.15420377059036,1.29171541356724,1.68876189798836,1.90995750405018,0.656563598980245,1.45740418314925,10.7546675166096,1.19609616558497,1.44470807574256,2.22233432843654,2.82552685507037,1.77702496037333,1.83022538565218,0.849892149969277,1.11961161858926,0.829199842826543,6.68269432610579,2.05618395827738,2.43983360552218,1.72808545314882,2.29997125615916,3.05707589244649,1.61837215661785,1.48776220305605,2.09404753587224,2.46268449254406,1.24267862617385,28.1846469342095,2.24274819065968,2.97825282822776,1.94451188344048,2.58319646955462,2.53434188236167,1.99507305697782,2.73429208172295,1.99232754408851,9.90494895386625,12.3852902690882,1.26404448251271,3.64905387522296,2.05421914329655,1.68897069871134,1.61124026100733,2.18549490259391,1.68273629327956,0.886137163047463,2.52416124870369,1.447929326445,0.806609481094724,1.16949456887703,1.25075394132428,1.05189211963412,1.13365191807606,7.5475224147182,3.40912655116008,6.04384618910682,0.772758376128762,1.50145980360946,1.09890974560359,1.07184189539533,0.501572104035363,4.51801474093653,4.60325236507177,9.16632821503035,6.70227411140382,5.48066015816514,6.7985450765073,8.10027000278167,5.85417564191487,6.34399372577886,5.1776031175182,2.17953429926771,1.99512436700516,2.56100408631201,1.94485373654635,4.19226325255965,3.30918315210025,4.66718128383392,3.09052585858341,2.24643446714271,6.06473308233114,2.5347929989024,4.52703219326583,5.15028291084353,3.39333307745807,4.82457939227151,5.23923060411381,3.24476112645595,3.08654752741928,3.70877310722976,3.23837624295674,3.77156177623957,6.74408063405482,3.09967046931517,5.23247099876383,4.89368778159719,4.23073039458383,3.10977553883713,5.5244639401947,3.66671107383827,5.05028044491965,4.74540072496697,3.25064791839359,7.36615877705441,5.11291575913688,4.05103883060397,2.74791635731741,3.27504251823572,1.93383948643468,6.69509162240952,3.52946270591225,5.56482805489012 | ||
|short_description=p2@Atp5o | |||
}} | }} |
Latest revision as of 20:51, 25 September 2015
Short description: | p2@Atp5o |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Atp5o_5end |
Coexpression cluster: | MCL_coexpression_mm9:3070 |
Association with transcript: | -13bp_to_NM_138597, uc007zys.1_5end |
EntrezGene: | Atp5o |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.00e-10 | 23 |
neuroblast (sensu Vertebrata) | 8.00e-10 | 23 |
neural cell | 2.40e-09 | 43 |
ectodermal cell | 7.68e-09 | 44 |
neurectodermal cell | 7.68e-09 | 44 |
neuron | 7.87e-07 | 33 |
neuronal stem cell | 7.87e-07 | 33 |
neuroblast | 7.87e-07 | 33 |
electrically signaling cell | 7.87e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.85e-13 | 75 |
central nervous system | 7.16e-13 | 73 |
gray matter | 5.11e-12 | 34 |
regional part of nervous system | 2.88e-11 | 54 |
neural tube | 3.29e-10 | 52 |
neural rod | 3.29e-10 | 52 |
future spinal cord | 3.29e-10 | 52 |
neural keel | 3.29e-10 | 52 |
structure with developmental contribution from neural crest | 1.10e-09 | 92 |
brain grey matter | 3.76e-09 | 29 |
regional part of telencephalon | 3.76e-09 | 29 |
telencephalon | 3.76e-09 | 29 |
brain | 2.68e-07 | 47 |
future brain | 2.68e-07 | 47 |
regional part of brain | 2.84e-07 | 46 |
neurectoderm | 5.16e-07 | 64 |
neural plate | 5.16e-07 | 64 |
presumptive neural plate | 5.16e-07 | 64 |
cerebral cortex | 5.64e-07 | 21 |
cerebral hemisphere | 5.64e-07 | 21 |
pallium | 5.64e-07 | 21 |