FFCP PHASE1:Mm9::chr18:24364223..24364263,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:24364223..24364263,+ to FFCP PHASE1:Mm9::chr18:24364223..24364263,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14423 | |EntrezGene=14423 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O08912 | |UniProt=O08912 | ||
|association_with_transcript=-4bp_to_ENSMUST00000170243_5end | |||
|cluster_id=chr18:24364223..24364263,+ | |||
|description=CAGE_peak_2_at_Galnt1_5end | |||
|id=chr18:24364223..24364263,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!7.33e-11!147;UBERON:0000065!9.07e-10!41;UBERON:0001004!6.88e-09!42;UBERON:0000926!7.53e-09!193;UBERON:0004120!7.53e-09!193;UBERON:0006603!7.53e-09!193;UBERON:0003081!3.05e-08!88;UBERON:0004177!7.13e-08!29;UBERON:0002370!1.21e-07!23;UBERON:0000974!1.21e-07!23;UBERON:0004807!1.21e-07!23;UBERON:0005058!1.21e-07!23;UBERON:0003351!1.21e-07!23;UBERON:0009113!1.21e-07!23;UBERON:0003295!1.21e-07!23;UBERON:0009722!1.21e-07!23;UBERON:0005562!1.21e-07!23;UBERON:0007690!1.21e-07!23;UBERON:0006562!3.65e-07!24;UBERON:0001557!3.65e-07!24;UBERON:0001042!3.65e-07!24;UBERON:0008814!3.65e-07!24;UBERON:0009145!3.65e-07!24;UBERON:0000072!5.72e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.32e-11,134;UBERON:0000065,7.34e-10,41;UBERON:0001004,4.80e-09,42;UBERON:0000926,1.26e-08,120;UBERON:0004120,1.26e-08,120;UBERON:0006603,1.26e-08,120;UBERON:0003081,5.23e-08,87;UBERON:0004177,5.79e-08,29;UBERON:0005057,5.79e-08,29;UBERON:0002370,9.66e-08,23;UBERON:0000974,9.66e-08,23;UBERON:0004807,9.66e-08,23;UBERON:0005058,9.66e-08,23;UBERON:0003351,9.66e-08,23;UBERON:0009113,9.66e-08,23;UBERON:0003295,9.66e-08,23;UBERON:0009722,9.66e-08,23;UBERON:0005562,9.66e-08,23;UBERON:0007690,9.66e-08,23;UBERON:0006562,2.95e-07,24;UBERON:0001557,2.95e-07,24;UBERON:0001042,2.95e-07,24;UBERON:0008814,2.95e-07,24;UBERON:0009145,2.95e-07,24;UBERON:0000072,4.70e-07,27;UBERON:0007811,5.24e-07,36;UBERON:0003408,8.54e-07,24;UBERON:0000153,9.74e-07,43 | |||
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|phase1_expression=4.00372117761985,1.39590163055744,1.36499771816861,0.90739263392049,2.50447864973174,1.17515490338323,1.86890112476421,9.16775596435192,3.09735188733667,4.68129052643987,2.91070545983358,2.79202556483677,6.33442700745461,5.15780374272085,2.6648780945253,2.42970320867791,2.09868563438444,8.3597473819933,10.4206969540361,7.63901373236454,2.89147186513637,3.97163804803541,3.13439746966722,1.43993180514066,1.60586496747019,1.72269589234506,1.29228598847722,1.29282739611533,2.09025761402011,1.00812051903972,1.77384408524244,1.27006134691926,0.61506478758457,0,0.866554859253824,0.664938581433969,2.24586291888606,0.837063261473815,0.7813353445238,1.57057123192139,0.588231488031014,1.36609096991689,1.94204141212461,0.251793635951155,0.202753862439029,1.65192076945513,0,1.74420125104357,1.97717564461025,0.777719596297134,2.65974201088189,1.43752564364972,11.7447824240415,6.5282592781021,5.37750078627942,1.28629718017973,1.71920063963254,2.06268836910977,1.82084814773638,2.64495489636016,2.53532561402472,0.677689064138264,0.889294796111139,1.7997994345628,0,0.7104801149461,0.599200221036809,0.768436610643109,2.59224030771194,1.62007125998029,1.68259969081106,2.57085885963423,1.10434270475807,2.08234358665422,2.58782771749238,2.75765635983006,0,1.65993539510744,2.15049146558741,3.56092976871523,2.28719109006024,0.52091337055676,2.51264699101243,3.93933827022176,1.37518422999129,0.883885756421003,2.27794689278565,2.60959224155421,2.12033341332915,3.47629176491213,4.34796733052517,1.72084775396277,0,0.539703191637817,1.29955283489534,0.448026887097336,2.66844398250329,1.1930122580464,1.03914401841148,0.70667914902068,5.91542363062058,1.28326477414318,5.09610479413291,0,1.94841936910093,2.28023878927589,5.05524445014783,3.4255163915718,6.47344709117929,1.33597925158342,2.94925055502431,1.82679286987285,1.84492397804847,2.86373017049983,3.41007250693544,2.89033160058254,0.741584903203122,1.44599356919912,3.5384422077995,3.39710384889559,3.97514733228708,3.87900202508178,0,1.46390398505774,1.46612694769419,2.29911349687732,6.94927722134338,4.79922184794726,3.81210681219194,2.84602214869163,1.37250180845588,1.63350657746724,1.56441888173049,0.767146371990992,1.66230435647648,3.24482526135515,3.7680564624617,3.35898820647251,4.29628689337247,1.26265113531884,2.86264974517948,2.5289231487682,1.80062129805349,3.61691562805716,4.42237244483631,3.07472928683639,4.12287588062807,2.58703370739016,3.01795190105979,4.16033376369202,3.69497360744293,2.84954452155847,1.39023624612799,1.39300866608867,2.67516777330327,4.97585667046233,4.91549231119264,3.3455227924913,4.26245249093389,4.34964122324554,3.28336483973535,5.76198596675248,4.97163944728941,3.34499193970586,3.08534225774756,3.72054311600653,4.29237442239391,6.30532848782715,4.27855609775049,4.26835406605648,2.99954595319666,4.82459958503597,2.63460138349261,4.83143107537338,2.3131894342054,2.36680608472354,1.32167513193519,1.05780226665418,4.05247676016945,0.928946687441754,1.9330119198314,2.01683524623343,1.55664630691409,2.09248188723815,3.79623249235609,1.97638745668813,1.50801125280162,1.79060824837036,3.11942539390592,0,1.72910439899755,0.995706366271836,2.0863469104839,3.42745537829186,5.63538678365402,2.8511185898344,3.68509725618489,4.55882829287071,5.75452487830741,4.57591458736767,4.55296310739987,3.45512058981041,1.48226313543574,4.00428253718626,2.55526693647164,2.24862112384854,1.01430060694251,1.4470629585145,1.78238096246994,2.01387296215567,2.59416362840057,2.19649130550465,2.87536413054709,3.34926852901653,3.12037673114561,1.26289438973556,1.07638448113147,2.41221760681684,3.51031061316549,3.60033682363921,2.44447464663039,2.20668611507745,3.52035372432753,3.35012514883632,2.38043640886014,7.21994497073856,4.41378403497335,5.3151525515706,3.98636921643718,4.91589944147214,3.9717545829156,3.47157740595628,0,0.54390568381871,0.491764273019036,1.37968373152366,1.76605648986571,1.99259867206745,1.80328439914343,2.7771801992481,3.15508219416257,1.95219372148319,2.58508077279359,1.91175038362042,1.33679204449436,3.67999490025482,0.809621403349789,2.92255857911312,3.16230222357219,3.53453448063988,2.12910127812403,3.02711526234334,3.74640006513225,1.97964147567043,0,1.69946445308487,3.02323556964751,1.88605079755898,1.77181135728464,1.84461088766356,5.42699415653264,2.54473610634254,2.13898427030833,1.58018378967908,4.21674434299995,2.06271086496374,3.06395645178409,2.88097750450096,1.16422815404479,2.7863814554107,3.01478397191865,3.56737635204141,3.62007845324666,2.43571959291679,3.28540391289194,2.54198485036584,1.54369878638473,0.98931751764888,1.13025098687134,2.29189114726992,1.55184047204077,1.80554989719567,1.7488850197791,2.03967832211561,2.39219233116994,3.50857675537478,3.51869602002452,2.26042148405629,3.41735569302563,3.43167259809784,7.64902934972349,5.73800954526998,6.90999869022119,0.954670618015114,2.21435195506795,2.03319467126849,2.05210147561422,1.67270636811575,2.40198820120795,2.02296519577231,2.97552440611209,1.3087797099201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| ||
|short_description=p2@Galnt1 | |||
}} | }} |
Latest revision as of 02:50, 27 September 2015
Short description: | p2@Galnt1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Galnt1_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENSMUST00000170243_5end |
EntrezGene: | Galnt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primordium | 1.32e-11 | 134 |
respiratory tract | 7.34e-10 | 41 |
respiratory system | 4.80e-09 | 42 |
mesoderm | 1.26e-08 | 120 |
mesoderm-derived structure | 1.26e-08 | 120 |
presumptive mesoderm | 1.26e-08 | 120 |
lateral plate mesoderm | 5.23e-08 | 87 |
hemopoietic organ | 5.79e-08 | 29 |
immune organ | 5.79e-08 | 29 |
thymus | 9.66e-08 | 23 |
neck | 9.66e-08 | 23 |
respiratory system epithelium | 9.66e-08 | 23 |
hemolymphoid system gland | 9.66e-08 | 23 |
pharyngeal epithelium | 9.66e-08 | 23 |
thymic region | 9.66e-08 | 23 |
pharyngeal gland | 9.66e-08 | 23 |
entire pharyngeal arch endoderm | 9.66e-08 | 23 |
thymus primordium | 9.66e-08 | 23 |
early pharyngeal endoderm | 9.66e-08 | 23 |
pharynx | 2.95e-07 | 24 |
upper respiratory tract | 2.95e-07 | 24 |
chordate pharynx | 2.95e-07 | 24 |
pharyngeal arch system | 2.95e-07 | 24 |
pharyngeal region of foregut | 2.95e-07 | 24 |
segment of respiratory tract | 4.70e-07 | 27 |
craniocervical region | 5.24e-07 | 36 |
gland of gut | 8.54e-07 | 24 |
anterior region of body | 9.74e-07 | 43 |