Personal tools

FFCP PHASE1:Mm9::chr18:65183516..65183557,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr18:65183516..65183557,+
|DHSsupport=NA
|short_description=p1@Nedd4l
|DPIdataset=NA
|description=CAGE_peak_1_at_Nedd4l_5end
|association_with_transcript=335bp_to_ENSMUST00000080418,ENSMUST00000163809,ENSMUST00000170658,NM_031881,uc008fep.2,uc008feq.2,uc008fer.2_5end
|EntrezGene=83814
|EntrezGene=83814
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=G3X9H8,F6ZTP8,F7AT14,Q80U03,Q3TQK9,Q8CFI0
|UniProt=G3X9H8,F6ZTP8,F7AT14,Q80U03,Q3TQK9,Q8CFI0
|association_with_transcript=335bp_to_ENSMUST00000080418,ENSMUST00000163809,ENSMUST00000170658,NM_031881,uc008fep.2,uc008feq.2,uc008fer.2_5end
|cluster_id=chr18:65183516..65183557,+
|description=CAGE_peak_1_at_Nedd4l_5end
|id=chr18:65183516..65183557,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005177!1.42e-12!85;UBERON:0009569!1.05e-11!66;UBERON:0002100!3.17e-09!98;UBERON:0001008!9.02e-09!17;UBERON:0002365!1.09e-08!25;UBERON:0002330!1.09e-08!25;UBERON:0004111!1.67e-08!122;UBERON:0006554!2.15e-08!16;UBERON:0002113!2.71e-08!14;UBERON:0003918!2.71e-08!14;UBERON:0005095!2.71e-08!14;UBERON:0007687!2.71e-08!14;UBERON:0000466!4.17e-08!79;UBERON:0005153!5.20e-08!17;UBERON:0009854!2.50e-07!23;UBERON:0009856!2.50e-07!23;UBERON:0002107!2.64e-07!22;UBERON:0007499!2.64e-07!22;UBERON:0006925!2.64e-07!22;UBERON:0009497!2.64e-07!22;UBERON:0000015!2.64e-07!22;UBERON:0002423!2.64e-07!22;UBERON:0006235!2.64e-07!22;UBERON:0008835!2.64e-07!22;UBERON:0003894!2.64e-07!22;UBERON:0004161!2.64e-07!22;UBERON:0008836!2.64e-07!22;UBERON:0000468!3.59e-07!333;UBERON:0005172!4.89e-07!49;UBERON:0005173!4.89e-07!49;UBERON:0002417!4.89e-07!49;UBERON:0000916!4.89e-07!49;UBERON:0002048!5.42e-07!14;UBERON:0000117!5.42e-07!14;UBERON:0000171!5.42e-07!14;UBERON:0000170!5.42e-07!14;UBERON:0005597!5.42e-07!14;UBERON:0000118!5.42e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.39e-13,79;UBERON:0009569,3.13e-11,66;UBERON:0002100,4.97e-10,90;UBERON:0001008,1.75e-09,19;UBERON:0006554,4.59e-09,18;UBERON:0002113,6.02e-09,14;UBERON:0003918,6.02e-09,14;UBERON:0011143,6.02e-09,14;UBERON:0005095,6.02e-09,14;UBERON:0007687,6.02e-09,14;UBERON:0002365,1.60e-08,25;UBERON:0002330,1.60e-08,25;UBERON:0005153,2.42e-08,17;UBERON:0004111,6.97e-08,122;UBERON:0002048,3.18e-07,14;UBERON:0000117,3.18e-07,14;UBERON:0000171,3.18e-07,14;UBERON:0000170,3.18e-07,14;UBERON:0005597,3.18e-07,14;UBERON:0000118,3.18e-07,14;UBERON:0009854,4.36e-07,23;UBERON:0009856,4.36e-07,23;UBERON:0002107,4.79e-07,22;UBERON:0007499,4.79e-07,22;UBERON:0006925,4.79e-07,22;UBERON:0009497,4.79e-07,22;UBERON:0000015,4.79e-07,22;UBERON:0002423,4.79e-07,22;UBERON:0006235,4.79e-07,22;UBERON:0008835,4.79e-07,22;UBERON:0003894,4.79e-07,22;UBERON:0004161,4.79e-07,22;UBERON:0008836,4.79e-07,22;UBERON:0005172,5.83e-07,49;UBERON:0005173,5.83e-07,49;UBERON:0002417,5.83e-07,49;UBERON:0000916,5.83e-07,49
|phase1_expression=6.08565618998217,0.348975407639361,0,0.60492842261366,0,4.36486106970913,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6069264241712,0,0,0.95995453676044,0.45881856213434,0.57423196411502,1.29228598847722,0.646413698057667,2.28028103347649,1.26015064879965,0.665191531965914,0,0,0,0.866554859253824,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0.220868540951614,1.46988959057945,1.0543001812006,0.919218786610021,1.10115880999389,12.1302971180928,7.98753972932466,0.527545150920775,1.18933936683133,0.52091337055676,1.3959149950069,3.37657566019008,7.02871939773326,1.17851434189467,1.13897344639282,0.186399445825301,0,0,44.9289957487601,25.8127163094416,25.8389106808945,29.6836755400799,35.0879265421741,20.6092368064774,6.03911006566533,0,0,0,14.9294024963281,0,0,0,0.432982082022428,0.760079596425296,2.02209778005913,23.2935114626882,0,0,0,0,1.15307748628029,0.60289056221049,0.705532242814229,0.251333182659351,24.7194967734374,0.144599356919912,0,0.647067399789637,0.220841518460394,0,3.72783522436244,0.585561594023094,2.30391377494801,1.78819938646014,0,0,0,5.54225365797844,43.4625572677695,7.28795242254614,25.0307021076878,20.9686675010871,16.2074674756457,22.064811777215,5.70300437561771,15.6752782968717,59.3898482319136,0.631325567659422,0,0.229902104433473,0.360124259610698,0.60281927134286,0.544291993210623,0.640568601424249,0.937017245597288,1.55222022443409,0,0.567318240503458,0.351902248327898,0,0.556094498451196,0.348252166522167,2.05782136407943,2.18937693500343,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,0,0.232533944750408,1.07309360559848,0,0.16455984991348,0.164167464079095,0,0,0,0,14.7202963994889,0.308713837137853,2.64335026387038,1.05780226665418,0.853153002140936,0.696710015581316,2.70621668776396,2.8235693447268,3.55804870151792,4.1849637744763,1.89811624617805,3.78807595865225,3.2673577144035,2.58643413653496,2.14460495831032,1.79763881730844,3.02593269824572,4.38110801159608,4.36236172192088,9.48262654660749,27.0498565615393,18.3286195060783,28.511015613641,31.701390590424,34.7800954183415,37.3453674388393,43.0176514285367,43.312404536552,30.2381679628892,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,2.41177159752417,5.60176873919124,23.8787794084173,32.9134510353322,10.4333337011471,21.5652309791032,20.8398930694362,12.793544597697,20.2063102357689,20.451305141498,28.4641677604387,27.7129785249907,0.37898282354097,3.58522948172457,9.16623463186016,38.7238909676028,94.3060229397423,103.072896503644,71.80918241167,18.9162172927429,14.1737401375216,10.8429242687091,19.99132439532,18.8226630233826,35.5836684110518,0,0,14.7529281905711,25.1102439137307,2.40825884981688,3.16471553798949,0,0.252470927204373,0,0,0,0,0,0,0,0,0,6.42642632843614,4.68402281187286,2.67098405500883,3.09485222771795,11.8778488540226,2.65490276679926,4.12727081463468,3.62788268357701,3.58349651536206,3.54362271456927,6.7635732547664,7.49442050187841,7.63420831902762,6.77345018930971,8.21695570633122,4.21674434299995,2.06271086496374,17.0219802876894,0.18006109403131,0.905510786479282,3.00071849044229,4.07882537377229,5.88617098086833,4.93647061806363,4.87143918583359,5.39744928546534,4.02480934641258,5.29268155331909,3.2977250588296,3.55221738730992,2.71408162176701,2.14870219205646,2.29797259643086,3.49777003955821,1.8542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,7.72613975082025,5.72428306355547,4.18176592028937,3.05707589244649,2.29269388854195,1.98368293740806,0,6.61036363788144,16.776161453347,0,0,0,0,0.645799117388655,0,0.58678619322877,1.5624526181274,0.104859344425711,0,1.72818003754719,0.316011120628178,2.43270258348197,2.05421914329655,1.42912905275575,0.537080087002444,0.39736270956253,0.120195449519969,0.738447635872886,0.302899349844443,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0,4.30787728868902,0,0.0897138566094757,2.51826924546118,6.37525660306228,3.94133198447482,17.7657075539247,12.862102744744,36.1131914905462,10.1655331671072,11.5081309126794,13.1765968091061,15.4667864109319,12.3314853558716,11.3309084608455,12.8254275044043,14.4102785031751,14.0474146785103,14.497288729051,0,0.399024873401031,0.853668028770671,1.94485373654635,1.46729213839588,3.30918315210025,8.44537565646138,6.59312183164461,8.98573786857083,8.59170519996911,8.61829619626815,7.9223063382152,9.45779225445812,9.66779801313526,10.7978681636553,5.71552429539688,7.88013416425017,9.64546102318525,7.41754621445952,10.1567254892734,5.82877729055206,7.27650805253284,10.9680647375768,9.01147783120437,10.4461412261017,9.13837765230106,8.23175877927476,12.8904158604543,8.01244271690584,5.61142271657738,7.71127617807132,7.38783617816726,7.36615877705441,7.2820315357404,5.78719832943424,1.24905288968973,7.48581147025307,4.51229213501426,0.382576664137687,1.32354851471709,0.231867835620421
|phase1_expression=6.08565618998217,0.348975407639361,0,0.60492842261366,0,4.36486106970913,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6069264241712,0,0,0.95995453676044,0.45881856213434,0.57423196411502,1.29228598847722,0.646413698057667,2.28028103347649,1.26015064879965,0.665191531965914,0,0,0,0.866554859253824,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0.220868540951614,1.46988959057945,1.0543001812006,0.919218786610021,1.10115880999389,12.1302971180928,7.98753972932466,0.527545150920775,1.18933936683133,0.52091337055676,1.3959149950069,3.37657566019008,7.02871939773326,1.17851434189467,1.13897344639282,0.186399445825301,0,0,44.9289957487601,25.8127163094416,25.8389106808945,29.6836755400799,35.0879265421741,20.6092368064774,6.03911006566533,0,0,0,14.9294024963281,0,0,0,0.432982082022428,0.760079596425296,2.02209778005913,23.2935114626882,0,0,0,0,1.15307748628029,0.60289056221049,0.705532242814229,0.251333182659351,24.7194967734374,0.144599356919912,0,0.647067399789637,0.220841518460394,0,3.72783522436244,0.585561594023094,2.30391377494801,1.78819938646014,0,0,0,5.54225365797844,43.4625572677695,7.28795242254614,25.0307021076878,20.9686675010871,16.2074674756457,22.064811777215,5.70300437561771,15.6752782968717,59.3898482319136,0.631325567659422,0,0.229902104433473,0.360124259610698,0.60281927134286,0.544291993210623,0.640568601424249,0.937017245597288,1.55222022443409,0,0.567318240503458,0.351902248327898,0,0.556094498451196,0.348252166522167,2.05782136407943,2.18937693500343,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,0,0.232533944750408,1.07309360559848,0,0.16455984991348,0.164167464079095,0,0,0,0,14.7202963994889,0.308713837137853,2.64335026387038,1.05780226665418,0.853153002140936,0.696710015581316,2.70621668776396,2.8235693447268,3.55804870151792,4.1849637744763,1.89811624617805,3.78807595865225,3.2673577144035,2.58643413653496,2.14460495831032,1.79763881730844,3.02593269824572,4.38110801159608,4.36236172192088,9.48262654660749,27.0498565615393,18.3286195060783,28.511015613641,31.701390590424,34.7800954183415,37.3453674388393,43.0176514285367,43.312404536552,30.2381679628892,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,2.41177159752417,5.60176873919124,23.8787794084173,32.9134510353322,10.4333337011471,21.5652309791032,20.8398930694362,12.793544597697,20.2063102357689,20.451305141498,28.4641677604387,27.7129785249907,0.37898282354097,3.58522948172457,9.16623463186016,38.7238909676028,94.3060229397423,103.072896503644,71.80918241167,18.9162172927429,14.1737401375216,10.8429242687091,19.99132439532,18.8226630233826,35.5836684110518,0,0,14.7529281905711,25.1102439137307,2.40825884981688,3.16471553798949,0,0.252470927204373,0,0,0,0,0,0,0,0,0,6.42642632843614,4.68402281187286,2.67098405500883,3.09485222771795,11.8778488540226,2.65490276679926,4.12727081463468,3.62788268357701,3.58349651536206,3.54362271456927,6.7635732547664,7.49442050187841,7.63420831902762,6.77345018930971,8.21695570633122,4.21674434299995,2.06271086496374,17.0219802876894,0.18006109403131,0.905510786479282,3.00071849044229,4.07882537377229,5.88617098086833,4.93647061806363,4.87143918583359,5.39744928546534,4.02480934641258,5.29268155331909,3.2977250588296,3.55221738730992,2.71408162176701,2.14870219205646,2.29797259643086,3.49777003955821,1.8542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,7.72613975082025,5.72428306355547,4.18176592028937,3.05707589244649,2.29269388854195,1.98368293740806,0,6.61036363788144,16.776161453347,0,0,0,0,0.645799117388655,0,0.58678619322877,1.5624526181274,0.104859344425711,0,1.72818003754719,0.316011120628178,2.43270258348197,2.05421914329655,1.42912905275575,0.537080087002444,0.39736270956253,0.120195449519969,0.738447635872886,0.302899349844443,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0,4.30787728868902,0,0.0897138566094757,2.51826924546118,6.37525660306228,3.94133198447482,17.7657075539247,12.862102744744,36.1131914905462,10.1655331671072,11.5081309126794,13.1765968091061,15.4667864109319,12.3314853558716,11.3309084608455,12.8254275044043,14.4102785031751,14.0474146785103,14.497288729051,0,0.399024873401031,0.853668028770671,1.94485373654635,1.46729213839588,3.30918315210025,8.44537565646138,6.59312183164461,8.98573786857083,8.59170519996911,8.61829619626815,7.9223063382152,9.45779225445812,9.66779801313526,10.7978681636553,5.71552429539688,7.88013416425017,9.64546102318525,7.41754621445952,10.1567254892734,5.82877729055206,7.27650805253284,10.9680647375768,9.01147783120437,10.4461412261017,9.13837765230106,8.23175877927476,12.8904158604543,8.01244271690584,5.61142271657738,7.71127617807132,7.38783617816726,7.36615877705441,7.2820315357404,5.78719832943424,1.24905288968973,7.48581147025307,4.51229213501426,0.382576664137687,1.32354851471709,0.231867835620421
|short_description=p1@Nedd4l
}}
}}

Latest revision as of 15:13, 1 October 2015

Short description:p1@Nedd4l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nedd4l_5end
Coexpression cluster:NA
Association with transcript: 335bp_to_ENSMUST00000080418, ENSMUST00000163809, ENSMUST00000170658, NM_031881, uc008fep.2, uc008feq.2, uc008fer.2_5end
EntrezGene:Nedd4l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nedd4l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G344.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F725.81
Mouse hepatocyte, donor1.CNhs13078.11714-123C425.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C829.68
Mouse hepatocyte, donor6.CNhs13090.11822-124F435.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.61
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.29
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A824.72
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D843.46
corpus striatum, neonate N00.CNhs11226.630-43F17.29
cortex, adult.CNhs10473.12-14D525.03
cortex, neonate N30.CNhs11107.1392-42F220.97
diencephalon, adult.CNhs10482.20-12F216.21
diencephalon, neonate N30.CNhs11201.1388-42B222.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.68
epididymis, adult.CNhs10490.58-23B259.39
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E814.72
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F89.48
kidney, embryo E16.CNhs10584.464-22A527.05
kidney, embryo E17.CNhs11028.483-18I218.33
kidney, embryo E18.CNhs11001.1288-20C728.51
kidney, neonate N00.CNhs11214.646-21G731.70
kidney, neonate N10.CNhs11206.758-6D534.78
kidney, neonate N20.CNhs11113.832-19I137.35
kidney, neonate N25.CNhs11122.1353-25F343.02
kidney, neonate N30.CNhs11203.1385-42H143.31
liver, adult pregnant day01.CNhs10466.508-5B230.24
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G423.88
liver, neonate N00.CNhs11117.641-24F432.91
liver, neonate N03.CNhs11123.1345-25G210.43
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H220.84
liver, neonate N10.CNhs11115.751-24B912.79
liver, neonate N20.CNhs11220.823-25A320.21
liver, neonate N25.CNhs11198.1368-26H120.45
liver, neonate N30.CNhs11106.1382-42D128.46
lung, adult.CNhs10474.28-22B127.71
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C59.17
lung, embryo E16.CNhs10998.458-17B638.72
lung, embryo E17.CNhs10605.480-44A694.31
lung, embryo E18.CNhs10583.1287-20I6103.07
lung, neonate N00.CNhs11224.640-42C671.81
lung, neonate N06.CNhs11212.683-20E518.92
lung, neonate N07.CNhs11111.715-19A314.17
lung, neonate N10.CNhs11219.750-23E610.84
lung, neonate N20.CNhs11109.822-18A419.99
lung, neonate N25.CNhs11119.1359-25C718.82
lung, neonate N30.CNhs11133.1394-42H235.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B614.75
mammary gland, adult pregnant day19.CNhs10476.588-5H225.11
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G611.88
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G97.49
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B68.22
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G817.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H32.71
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G87.73
stomach, embryo E16.CNhs11022.459-17D45.72
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I16.61
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E46.38
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E517.77
vagina, adult.CNhs10502.89-27D512.86
vesicular gland, adult.CNhs10491.51-27F836.11
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.67
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.16
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.01
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.01
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.28
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element2.39e-1379
subdivision of trunk3.13e-1166
trunk4.97e-1090
renal system1.75e-0919
urinary system structure4.59e-0918
kidney6.02e-0914
kidney mesenchyme6.02e-0914
upper urinary tract6.02e-0914
kidney rudiment6.02e-0914
kidney field6.02e-0914
exocrine gland1.60e-0825
exocrine system1.60e-0825
epithelial bud2.42e-0817
anatomical conduit6.97e-08122
lung3.18e-0714
respiratory tube3.18e-0714
respiration organ3.18e-0714
pair of lungs3.18e-0714
lung primordium3.18e-0714
lung bud3.18e-0714
digestive tract diverticulum4.36e-0723
sac4.36e-0723
liver4.79e-0722
epithelial sac4.79e-0722
digestive gland4.79e-0722
epithelium of foregut-midgut junction4.79e-0722
anatomical boundary4.79e-0722
hepatobiliary system4.79e-0722
foregut-midgut junction4.79e-0722
hepatic diverticulum4.79e-0722
liver primordium4.79e-0722
septum transversum4.79e-0722
liver bud4.79e-0722
abdomen element5.83e-0749
abdominal segment element5.83e-0749
abdominal segment of trunk5.83e-0749
abdomen5.83e-0749
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:65183516..65183557,%2B&oldid=4308952"