FFCP PHASE1:Mm9::chr18:69752864..69752875,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21413 | |EntrezGene=21413 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=Q60722 | |UniProt=Q60722 | ||
|association_with_transcript=-195bp_to_ENSMUST00000114978_5end | |||
|cluster_id=chr18:69752864..69752875,+ | |||
|description=CAGE_peak_25_at_Tcf4_5end | |||
|id=chr18:69752864..69752875,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.51e-14!33;CL:0000047!2.51e-14!33;CL:0000031!2.51e-14!33;CL:0000404!2.51e-14!33;CL:0002319!5.05e-13!43;CL:0000221!1.99e-12!44;CL:0000133!1.99e-12!44;CL:0000393!5.84e-11!39;CL:0000211!5.84e-11!39;CL:0000055!6.10e-10!50;CL:0000107!1.99e-09!9;CL:0000117!3.03e-07!23;CL:0000337!3.03e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.28e-45,9;CL:0002319,4.83e-24,43;CL:0000540,5.01e-24,33;CL:0000047,5.01e-24,33;CL:0000031,5.01e-24,33;CL:0000404,5.01e-24,33;CL:0000221,1.90e-23,44;CL:0000133,1.90e-23,44;CL:0000393,4.82e-20,39;CL:0000211,4.82e-20,39;CL:0002321,6.05e-14,70;CL:0002609,4.58e-13,6;CL:0000723,8.92e-09,91;CL:0000048,8.92e-09,91;CL:0000034,4.25e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.44e-16!73;UBERON:0005743!1.44e-16!73;UBERON:0000073!3.76e-16!75;UBERON:0001016!3.76e-16!75;UBERON:0004121!1.28e-11!102;UBERON:0000924!1.28e-11!102;UBERON:0006601!1.28e-11!102;UBERON:0001049!5.08e-11!52;UBERON:0005068!5.08e-11!52;UBERON:0006241!5.08e-11!52;UBERON:0007135!5.08e-11!52;UBERON:0002346!1.81e-10!71;UBERON:0003075!1.81e-10!71;UBERON:0007284!1.81e-10!71;UBERON:0002020!2.51e-10!34;UBERON:0002410!1.99e-09!9;UBERON:0002616!2.43e-08!49;UBERON:0003080!3.17e-08!40;UBERON:0002780!4.25e-08!39;UBERON:0001890!4.25e-08!39;UBERON:0006240!4.25e-08!39;UBERON:0003056!4.72e-08!49;UBERON:0000955!5.92e-08!50;UBERON:0006238!5.92e-08!50;UBERON:0000010!7.18e-08!11;UBERON:0002791!7.22e-08!29;UBERON:0003528!7.22e-08!29;UBERON:0001893!7.22e-08!29;UBERON:0000033!3.73e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.28e-45,9;UBERON:0000010,6.25e-37,11;UBERON:0000011,1.28e-16,3;UBERON:0010313,5.18e-16,3;UBERON:0002342,5.18e-16,3;UBERON:0002005,5.18e-16,3;UBERON:0005428,5.18e-16,3;UBERON:0005062,5.18e-16,3;UBERON:0000013,7.32e-16,3;UBERON:0001017,2.52e-15,73;UBERON:0001016,7.42e-15,75;UBERON:0004121,7.18e-13,95;UBERON:0000924,7.18e-13,95;UBERON:0006601,7.18e-13,95;UBERON:0000956,8.12e-08,21;UBERON:0001869,8.12e-08,21;UBERON:0000203,8.12e-08,21 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,1.09843091367236,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,2.7996195323289,1.89008313664367,2.73422449756797,0.285650984403804,0.883474163806454,0.979926393719632,1.24599112323707,0.919218786610021,0,0.255374676170375,0.153606533256243,0.395658863190582,0.365950574409639,0.52091337055676,0,0.56276261003168,0.30559649555362,0.589257170947335,0.569486723196412,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0.585561594023094,0.83778682725382,0,0.599075622529601,0,0.254140454146129,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0.62336413367868,0.162241263067758,0,0,0.252722758433675,0,0,0.229902104433473,0,0,0.748401490664606,0.896796041993948,1.12442069471675,0,0,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,1.74126083261083,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0.536546802799238,0.116765342367169,0,0.492502392237286,0.162137619091711,0.146199987425332,0,0.268412837520744,0.630869845692382,2.98423375899925,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0.476087281772027,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0.321101179975584,0,0,0.252470927204373,4.73262329124385,4.29482618726302,4.52389135238878,6.21318874676635,6.68396022247182,7.92614286208731,3.64329631507405,3.50707029493574,4.74345333535828,0,0.141940085208269,0.178065603667255,0.651547837414304,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0.428674070063185,0,0,0.329098041204242,0,0,0,0.220528398054962,0,0,0.180938774784468,0.119372344003136,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0.419854356970974,0.138199973804424,0,0.474503990371703,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0.549454872801795,0.214368379079066,0,0.564751842617067,0,0,0.343706364687375,0,0,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0.207574695168353,0,0.170733605754134,0.729320151204882,0.419226325255965,0.551530525350042,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.561849044819294,0.512201219238954,0.17230640686684,0,0.579421629724277,0,0,0.588795680537589,0.342869252385415,0.354951612318675,0.953744759789284,0.726732083161643,0.564656282491984,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0.818462086339379,0.154936841185966,0.578719832943424,0.749431733813838,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,1.09843091367236,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,2.7996195323289,1.89008313664367,2.73422449756797,0.285650984403804,0.883474163806454,0.979926393719632,1.24599112323707,0.919218786610021,0,0.255374676170375,0.153606533256243,0.395658863190582,0.365950574409639,0.52091337055676,0,0.56276261003168,0.30559649555362,0.589257170947335,0.569486723196412,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0.585561594023094,0.83778682725382,0,0.599075622529601,0,0.254140454146129,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0.62336413367868,0.162241263067758,0,0,0.252722758433675,0,0,0.229902104433473,0,0,0.748401490664606,0.896796041993948,1.12442069471675,0,0,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,1.74126083261083,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0.536546802799238,0.116765342367169,0,0.492502392237286,0.162137619091711,0.146199987425332,0,0.268412837520744,0.630869845692382,2.98423375899925,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0.476087281772027,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0.321101179975584,0,0,0.252470927204373,4.73262329124385,4.29482618726302,4.52389135238878,6.21318874676635,6.68396022247182,7.92614286208731,3.64329631507405,3.50707029493574,4.74345333535828,0,0.141940085208269,0.178065603667255,0.651547837414304,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0.428674070063185,0,0,0.329098041204242,0,0,0,0.220528398054962,0,0,0.180938774784468,0.119372344003136,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0.419854356970974,0.138199973804424,0,0.474503990371703,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0.549454872801795,0.214368379079066,0,0.564751842617067,0,0,0.343706364687375,0,0,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0.207574695168353,0,0.170733605754134,0.729320151204882,0.419226325255965,0.551530525350042,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.561849044819294,0.512201219238954,0.17230640686684,0,0.579421629724277,0,0,0.588795680537589,0.342869252385415,0.354951612318675,0.953744759789284,0.726732083161643,0.564656282491984,0.0846146078916765,0.548783918618318,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0.818462086339379,0.154936841185966,0.578719832943424,0.749431733813838,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | ||
|short_description=p25@Tcf4 | |||
}} | }} |
Latest revision as of 16:45, 1 October 2015
Short description: | p25@Tcf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_Tcf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | -195bp_to_ENSMUST00000114978_5end |
EntrezGene: | Tcf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.28e-45 | 9 |
neural cell | 4.83e-24 | 43 |
neuron | 5.01e-24 | 33 |
neuronal stem cell | 5.01e-24 | 33 |
neuroblast | 5.01e-24 | 33 |
electrically signaling cell | 5.01e-24 | 33 |
ectodermal cell | 1.90e-23 | 44 |
neurectodermal cell | 1.90e-23 | 44 |
electrically responsive cell | 4.82e-20 | 39 |
electrically active cell | 4.82e-20 | 39 |
embryonic cell | 6.05e-14 | 70 |
neuron of cerebral cortex | 4.58e-13 | 6 |
somatic stem cell | 8.92e-09 | 91 |
multi fate stem cell | 8.92e-09 | 91 |
stem cell | 4.25e-08 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.28e-45 | 9 |
peripheral nervous system | 6.25e-37 | 11 |
parasympathetic nervous system | 1.28e-16 | 3 |
neural crest-derived structure | 5.18e-16 | 3 |
neural crest | 5.18e-16 | 3 |
enteric nervous system | 5.18e-16 | 3 |
vagal neural crest | 5.18e-16 | 3 |
neural fold | 5.18e-16 | 3 |
sympathetic nervous system | 7.32e-16 | 3 |
central nervous system | 2.52e-15 | 73 |
nervous system | 7.42e-15 | 75 |
ectoderm-derived structure | 7.18e-13 | 95 |
ectoderm | 7.18e-13 | 95 |
presumptive ectoderm | 7.18e-13 | 95 |
cerebral cortex | 8.12e-08 | 21 |
cerebral hemisphere | 8.12e-08 | 21 |
pallium | 8.12e-08 | 21 |