FFCP PHASE1:Mm9::chr19:55982995..55983007,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:55982995..55983007,+ | |||
|description=CAGE_peak_at_chr19:55982995..55983007,+ | |||
|id=chr19:55982995..55983007,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.44e-16,3;CL:0000120,2.04e-15,3;CL:0000117,2.51e-13,23;CL:0000337,2.51e-13,23;CL:0000540,5.47e-09,33;CL:0000047,5.47e-09,33;CL:0000031,5.47e-09,33;CL:0000404,5.47e-09,33;CL:0002319,2.30e-08,43;CL:0000221,3.81e-08,44;CL:0000133,3.81e-08,44;CL:0002610,9.02e-08,3;CL:0000393,1.89e-07,39;CL:0000211,1.89e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,3.79e-10,5;UBERON:0002435,3.79e-10,5;UBERON:0000204,3.79e-10,5;UBERON:0010082,3.79e-10,5;UBERON:0004684,9.02e-08,3;UBERON:0002275,9.02e-08,3 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.183546752161682,0.782391344348039,0.436050312760893,0,0,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,1.26766280701236,0,0,0.449949858640699,0,0,0.898800331555214,1.15265491596466,0,0,0,0,0.662605622854841,0,0,0,0,1.78762273319263,1.53606533256243,4.2203612073662,11.2529801630964,2.08365348222704,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0.140444420131752,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,1.3481157546434,0.457500602818626,0.125654352112864,0,0,1.0389402227978,0.486723789203273,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,1.66828349535359,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.703578179943289,0.540186184383045,0.710234206755631,0,0.154267112887378,0.465067889500816,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0,0.205809224758569,0,0.793351699990633,0.426576501070468,0.696710015581316,0.644337306610467,0.605050573870028,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,0.948339504765408,0,0,0.407302655690628,0.193952487167626,0.350679099451593,0.126473074248515,0.295220295959204,0.470996183524124,0.370191491765402,0,0.333690211432188,0,0,0.202860121388503,0,0,0.287696137450811,0.486405680325106,0,1.43768206527355,1.48856379067401,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0.234690248288502,0.670025029767263,0,0.390267295715598,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0.491764273019036,1.37968373152366,0,0.234423373184406,0.655739781506702,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0,0.141940085208269,0.712262414669021,0.162886959353576,0.164970122972535,0,0,0.906970670894253,0.188605079755898,1.18120757152309,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0.517434735131018,0.428674070063185,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0.847328283455281,0.220528398054962,0,0.322928853391811,0.180938774784468,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0,0.324016022465404,0.627264888043406,0.436725127492355,0,0.165306911450672,0.523511883968059,0.777689839750757,0,0.56369293868419,0.448549638131936,0.165458490457098,0.194451188344048,0.387479470433193,0.506868376472335,0.469428954583016,0.2604087696879,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.443971906748129,0,0.671538465456314,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0.682934423016537,0,0.628839487883947,0,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0,0.192075457214608,0.402048282689293,0.476293691283074,0.115884325944855,0.192909220463705,0,0.441596760403192,1.02860775715625,0,0.476872379894642,0.436039249896986,0.376437521661322,0.25384382367503,0,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.394017929502254,0,0.154936841185966,0,1.49886346762768,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0 | |phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.183546752161682,0.782391344348039,0.436050312760893,0,0,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,1.26766280701236,0,0,0.449949858640699,0,0,0.898800331555214,1.15265491596466,0,0,0,0,0.662605622854841,0,0,0,0,1.78762273319263,1.53606533256243,4.2203612073662,11.2529801630964,2.08365348222704,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0.140444420131752,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,1.3481157546434,0.457500602818626,0.125654352112864,0,0,1.0389402227978,0.486723789203273,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,1.66828349535359,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.703578179943289,0.540186184383045,0.710234206755631,0,0.154267112887378,0.465067889500816,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0,0.205809224758569,0,0.793351699990633,0.426576501070468,0.696710015581316,0.644337306610467,0.605050573870028,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,0.948339504765408,0,0,0.407302655690628,0.193952487167626,0.350679099451593,0.126473074248515,0.295220295959204,0.470996183524124,0.370191491765402,0,0.333690211432188,0,0,0.202860121388503,0,0,0.287696137450811,0.486405680325106,0,1.43768206527355,1.48856379067401,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0.234690248288502,0.670025029767263,0,0.390267295715598,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0.491764273019036,1.37968373152366,0,0.234423373184406,0.655739781506702,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0,0.141940085208269,0.712262414669021,0.162886959353576,0.164970122972535,0,0,0.906970670894253,0.188605079755898,1.18120757152309,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0.517434735131018,0.428674070063185,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0.847328283455281,0.220528398054962,0,0.322928853391811,0.180938774784468,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0,0.324016022465404,0.627264888043406,0.436725127492355,0,0.165306911450672,0.523511883968059,0.777689839750757,0,0.56369293868419,0.448549638131936,0.165458490457098,0.194451188344048,0.387479470433193,0.506868376472335,0.469428954583016,0.2604087696879,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.443971906748129,0,0.671538465456314,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0.682934423016537,0,0.628839487883947,0,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0,0.192075457214608,0.402048282689293,0.476293691283074,0.115884325944855,0.192909220463705,0,0.441596760403192,1.02860775715625,0,0.476872379894642,0.436039249896986,0.376437521661322,0.25384382367503,0,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.394017929502254,0,0.154936841185966,0,1.49886346762768,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0 | ||
|short_description=p@chr19:55982995..55983007,+ | |||
}} | }} |
Latest revision as of 09:01, 4 August 2015
Short description: | p@chr19:55982995..55983007, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:55982995..55983007, + |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.44e-16 | 3 |
granule cell | 2.04e-15 | 3 |
CNS neuron (sensu Vertebrata) | 2.51e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.51e-13 | 23 |
neuron | 5.47e-09 | 33 |
neuronal stem cell | 5.47e-09 | 33 |
neuroblast | 5.47e-09 | 33 |
electrically signaling cell | 5.47e-09 | 33 |
neural cell | 2.30e-08 | 43 |
ectodermal cell | 3.81e-08 | 44 |
neurectodermal cell | 3.81e-08 | 44 |
raphe nuclei neuron | 9.02e-08 | 3 |
electrically responsive cell | 1.89e-07 | 39 |
electrically active cell | 1.89e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 3.79e-10 | 5 |
striatum | 3.79e-10 | 5 |
ventral part of telencephalon | 3.79e-10 | 5 |
future corpus striatum | 3.79e-10 | 5 |
raphe nuclei | 9.02e-08 | 3 |
reticular formation | 9.02e-08 | 3 |