FFCP PHASE1:Mm9::chr2:38207200..38207210,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr2:38207200..38207210,+ to FFCP PHASE1:Mm9::chr2:38207200..38207210,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16870 | |EntrezGene=16870 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=148 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0S2,Q543C6 | |UniProt=Q9Z0S2,Q543C6 | ||
|association_with_transcript=372bp_to_ENSMUST00000000253,NM_010710,uc008jnl.1_5end | |||
|cluster_id=chr2:38207200..38207210,+ | |||
|description=CAGE_peak_13_at_Lhx2_5end | |||
|id=chr2:38207200..38207210,+ | |||
|ontology_enrichment_celltype=CL:0002453!8.49e-13!8;CL:0000128!3.36e-12!6;CL:0000126!3.36e-12!6;CL:0000127!3.36e-12!6;CL:0000333!4.45e-10!10;CL:0000095!4.45e-10!10;CL:0000243!4.45e-10!10;CL:0000123!4.45e-10!10;CL:0000125!4.45e-10!10;CL:0000030!4.45e-10!10;CL:0000339!4.45e-10!10;CL:0002604!4.56e-07!2;CL:0002605!4.56e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.66e-44,2;CL:0002604,1.66e-44,2;CL:0000128,2.62e-33,6;CL:0000126,2.62e-33,6;CL:0000127,2.62e-33,6;CL:0002453,2.89e-25,8;CL:0000333,1.99e-20,10;CL:0000095,1.99e-20,10;CL:0000243,1.99e-20,10;CL:0000123,1.99e-20,10;CL:0000125,1.99e-20,10;CL:0000030,1.99e-20,10;CL:0000339,1.99e-20,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.75e-09!3;UBERON:0000478!3.75e-09!3;UBERON:0000158!3.75e-09!3;UBERON:0004121!7.37e-08!102;UBERON:0000924!7.37e-08!102;UBERON:0006601!7.37e-08!102;UBERON:0003056!1.44e-07!49;UBERON:0000970!4.84e-07!9;UBERON:0000019!4.84e-07!9;UBERON:0000047!4.84e-07!9;UBERON:0004088!4.84e-07!9;UBERON:0002104!4.84e-07!9;UBERON:0001456!4.84e-07!9;UBERON:0003072!4.84e-07!9;UBERON:0003071!4.84e-07!9;UBERON:0004128!4.84e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.34e-13,7;UBERON:0003022,1.34e-13,7;UBERON:0002421,1.34e-13,7;UBERON:0000349,1.34e-13,7;UBERON:0002600,1.34e-13,7;UBERON:0001987,4.02e-12,2;UBERON:0003124,4.02e-12,2;UBERON:0004340,4.02e-12,2;UBERON:0005631,1.59e-08,3;UBERON:0000478,1.59e-08,3;UBERON:0000158,1.59e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,3.07560655828261,4.47188767870852,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0.191690942036473,0,0,0,0,0.395658863190582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0.390361328888111,0.919608417733892,0,0,0.0680364991513279,0,0.187403449119458,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0.23467170806371,1.69465656691056,0,0,0,0.301564624640779,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,3.07560655828261,4.47188767870852,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0.191690942036473,0,0,0,0,0.395658863190582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0.390361328888111,0.919608417733892,0,0,0.0680364991513279,0,0.187403449119458,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0.23467170806371,1.69465656691056,0,0,0,0.301564624640779,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@Lhx2 | |||
}} | }} |
Latest revision as of 16:39, 26 September 2015
Short description: | p13@Lhx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Lhx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | 372bp_to_ENSMUST00000000253, NM_010710, uc008jnl.1_5end |
EntrezGene: | Lhx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.66e-44 | 2 |
astrocyte of the hippocampus | 1.66e-44 | 2 |
oligodendrocyte | 2.62e-33 | 6 |
macroglial cell | 2.62e-33 | 6 |
astrocyte | 2.62e-33 | 6 |
oligodendrocyte precursor cell | 2.89e-25 | 8 |
migratory neural crest cell | 1.99e-20 | 10 |
neuron associated cell | 1.99e-20 | 10 |
glial cell (sensu Vertebrata) | 1.99e-20 | 10 |
neuron associated cell (sensu Vertebrata) | 1.99e-20 | 10 |
glial cell | 1.99e-20 | 10 |
glioblast | 1.99e-20 | 10 |
glioblast (sensu Vertebrata) | 1.99e-20 | 10 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.34e-13 | 7 |
lobe parts of cerebral cortex | 1.34e-13 | 7 |
hippocampal formation | 1.34e-13 | 7 |
limbic system | 1.34e-13 | 7 |
limbic lobe | 1.34e-13 | 7 |
placenta | 4.02e-12 | 2 |
chorion | 4.02e-12 | 2 |
allantois | 4.02e-12 | 2 |
extraembryonic membrane | 1.59e-08 | 3 |
extraembryonic structure | 1.59e-08 | 3 |
membranous layer | 1.59e-08 | 3 |