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FFCP PHASE1:Mm9::chr3:103664301..103664312,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:103664301..103664312,+
|DHSsupport=NA
|short_description=p5@Ptpn22
|DPIdataset=NA
|description=CAGE_peak_5_at_Ptpn22_5end
|association_with_transcript=86bp_to_NM_008979,uc008qtv.1_5end
|EntrezGene=19260
|EntrezGene=19260
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=P29352
|UniProt=P29352
|association_with_transcript=86bp_to_NM_008979,uc008qtv.1_5end
|cluster_id=chr3:103664301..103664312,+
|description=CAGE_peak_5_at_Ptpn22_5end
|id=chr3:103664301..103664312,+
|ontology_enrichment_celltype=CL:0000838!5.72e-13!12;CL:0000084!1.68e-12!11;CL:0000827!1.68e-12!11;CL:0000542!1.28e-11!13;CL:0000051!1.28e-11!13;CL:0000791!6.39e-11!9;CL:0000789!6.39e-11!9;CL:0002420!6.39e-11!9;CL:0002419!6.39e-11!9;CL:0000790!6.39e-11!9;CL:0000988!5.76e-10!32;CL:0002032!5.76e-10!32;CL:0000037!5.76e-10!32;CL:0000566!5.76e-10!32;CL:0000837!5.76e-10!32;CL:0000624!7.68e-10!8;CL:0002031!2.45e-09!25;CL:0000738!7.35e-08!17;CL:0002087!7.35e-08!17;CL:0000893!8.13e-08!6;CL:0002489!8.13e-08!6;CL:0000898!8.13e-08!6;CL:0000809!8.13e-08!6;CL:0000810!8.13e-08!6;CL:0000895!8.13e-08!6;CL:0000808!8.13e-08!6;CL:0000894!8.13e-08!6;CL:0000806!8.13e-08!6;CL:0000807!8.13e-08!6;CL:0000805!8.13e-08!6;CL:0002425!8.13e-08!6;CL:0002436!8.13e-08!6;CL:0002427!8.13e-08!6;CL:0002428!8.13e-08!6;CL:0002429!8.13e-08!6;CL:0002433!8.13e-08!6;CL:0002431!8.13e-08!6;CL:0002432!8.13e-08!6
|ontology_enrichment_celltype_v019_2=CL:0000084,1.23e-27,11;CL:0000827,1.23e-27,11;CL:0000838,3.97e-25,12;CL:0000791,7.36e-24,9;CL:0000789,7.36e-24,9;CL:0002420,7.36e-24,9;CL:0002419,7.36e-24,9;CL:0000790,7.36e-24,9;CL:0000542,5.26e-23,13;CL:0000051,5.26e-23,13;CL:0000624,2.79e-21,8;CL:0000738,5.16e-17,17;CL:0002087,5.16e-17,17;CL:0000893,1.84e-16,6;CL:0002489,1.84e-16,6;CL:0000898,1.84e-16,6;CL:0000809,1.84e-16,6;CL:0000810,1.84e-16,6;CL:0000895,1.84e-16,6;CL:0000808,1.84e-16,6;CL:0000894,1.84e-16,6;CL:0000806,1.84e-16,6;CL:0000807,1.84e-16,6;CL:0000805,1.84e-16,6;CL:0002425,1.84e-16,6;CL:0002436,1.84e-16,6;CL:0002427,1.84e-16,6;CL:0002428,1.84e-16,6;CL:0002429,1.84e-16,6;CL:0002433,1.84e-16,6;CL:0002431,1.84e-16,6;CL:0002432,1.84e-16,6;CL:0002031,4.18e-15,25;CL:0000988,6.77e-13,32;CL:0002032,6.77e-13,32;CL:0000037,6.77e-13,32;CL:0000837,6.77e-13,32;CL:0002320,5.15e-08,46;CL:0000134,5.15e-08,46;CL:0000068,1.17e-07,3;CL:0002202,1.17e-07,3;CL:0000069,1.17e-07,3;CL:0002632,1.17e-07,3;CL:0002368,1.17e-07,3;CL:0000307,1.17e-07,3;CL:0000377,1.17e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000072!1.51e-17!27;UBERON:0002193!1.08e-15!48;UBERON:0006562!6.20e-15!24;UBERON:0001557!6.20e-15!24;UBERON:0001042!6.20e-15!24;UBERON:0008814!6.20e-15!24;UBERON:0009145!6.20e-15!24;UBERON:0004177!1.39e-14!29;UBERON:0002370!1.73e-14!23;UBERON:0000974!1.73e-14!23;UBERON:0004807!1.73e-14!23;UBERON:0005058!1.73e-14!23;UBERON:0003351!1.73e-14!23;UBERON:0009113!1.73e-14!23;UBERON:0003295!1.73e-14!23;UBERON:0009722!1.73e-14!23;UBERON:0005562!1.73e-14!23;UBERON:0007690!1.73e-14!23;UBERON:0003408!1.42e-13!24;UBERON:0000065!1.68e-13!41;UBERON:0002390!1.76e-13!45;UBERON:0003061!1.76e-13!45;UBERON:0001004!6.15e-13!42;UBERON:0000063!9.42e-13!35;UBERON:0002405!2.46e-09!70;UBERON:0003081!1.79e-07!88;UBERON:0005057!6.16e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0000072,9.21e-34,27;UBERON:0002370,4.05e-29,23;UBERON:0000974,4.05e-29,23;UBERON:0004807,4.05e-29,23;UBERON:0005058,4.05e-29,23;UBERON:0003351,4.05e-29,23;UBERON:0009113,4.05e-29,23;UBERON:0003295,4.05e-29,23;UBERON:0009722,4.05e-29,23;UBERON:0005562,4.05e-29,23;UBERON:0007690,4.05e-29,23;UBERON:0006562,9.84e-28,24;UBERON:0003408,9.84e-28,24;UBERON:0001557,9.84e-28,24;UBERON:0001042,9.84e-28,24;UBERON:0008814,9.84e-28,24;UBERON:0009145,9.84e-28,24;UBERON:0000065,7.97e-23,41;UBERON:0004177,3.05e-22,29;UBERON:0005057,3.05e-22,29;UBERON:0001004,3.66e-22,42;UBERON:0002193,5.76e-19,48;UBERON:0002405,5.76e-19,48;UBERON:0000077,9.97e-18,35;UBERON:0007811,4.02e-17,36;UBERON:0002390,1.94e-16,45;UBERON:0003061,1.94e-16,45;UBERON:0000153,1.12e-13,43;UBERON:0003929,7.94e-10,55;UBERON:0001041,2.66e-09,80;UBERON:0002368,1.10e-08,60;UBERON:0005911,4.79e-08,69;UBERON:0002384,5.15e-08,46;UBERON:0002530,1.01e-07,65;UBERON:0003126,1.17e-07,3;UBERON:0001005,1.17e-07,3;UBERON:0007196,1.17e-07,3;UBERON:0001558,1.17e-07,3;UBERON:0000490,1.51e-07,66;UBERON:0003081,2.67e-07,87;UBERON:0001007,3.55e-07,116;UBERON:0001555,3.55e-07,116;UBERON:0007026,3.55e-07,116;UBERON:0004119,5.77e-07,118;UBERON:0000925,5.77e-07,118;UBERON:0006595,5.77e-07,118
|phase1_expression=0.160148847104794,0,0,0,0,0,0,3.09895976259783,210.901505783197,151.205684004008,37.4967350413856,26.2450403094657,9.41604014621631,2.62261207256992,0.666219523631325,0.809901069559304,0,2.68142840554502,1.37114433605739,0.84877930359606,0.425216450755349,1.88652807281682,1.04479915655574,0.639969691173627,1.60586496747019,0,0,0,0.570070258369122,1.76421090831952,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0.125896817975577,0,0,0,0,0,0,0,0,0.335565212115473,34.8173828165445,69.2353226233476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,3.24736561516821,2.02687892380079,1.01104889002957,0.34255163915718,7.50919862576798,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.289198713839823,0,0.323533699894818,0,0,0,0,0,0.766371165625774,1.07833612055328,0,0.762421362438388,0,0,0,0,0,0,0,0,0.746441823660558,2.52722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0,2.31293148088659,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,1.66277871149944,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.709700426041343,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0.854354403989263,0,0.185194527369712,0,0.136694227721025,0.228778173206523,1.01987057996313,1.25956307091292,1.52019971184866,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,4.10814456816632,0,0.308132871494482,0.77952493786677,1.25318686967237,2.78153896693771,2.28371354087941,2.21534290761866,2.22126189885925,2.43861781295999,2.52065462842101,2.53390489923356,3.65604998233252,6.19447581562315,0.226730383615211,0,0,0.167884616364078,0,0.93841237725591,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.377252682772152,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,3.09895976259783,210.901505783197,151.205684004008,37.4967350413856,26.2450403094657,9.41604014621631,2.62261207256992,0.666219523631325,0.809901069559304,0,2.68142840554502,1.37114433605739,0.84877930359606,0.425216450755349,1.88652807281682,1.04479915655574,0.639969691173627,1.60586496747019,0,0,0,0.570070258369122,1.76421090831952,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0.125896817975577,0,0,0,0,0,0,0,0,0.335565212115473,34.8173828165445,69.2353226233476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,3.24736561516821,2.02687892380079,1.01104889002957,0.34255163915718,7.50919862576798,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.289198713839823,0,0.323533699894818,0,0,0,0,0,0.766371165625774,1.07833612055328,0,0.762421362438388,0,0,0,0,0,0,0,0,0.746441823660558,2.52722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0,2.31293148088659,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,1.66277871149944,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.709700426041343,0.178065603667255,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0.854354403989263,0,0.185194527369712,0,0.136694227721025,0.228778173206523,1.01987057996313,1.25956307091292,1.52019971184866,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,4.10814456816632,0,0.308132871494482,0.77952493786677,1.25318686967237,2.78153896693771,2.28371354087941,2.21534290761866,2.22126189885925,2.43861781295999,2.52065462842101,2.53390489923356,3.65604998233252,6.19447581562315,0.226730383615211,0,0,0.167884616364078,0,0.93841237725591,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.377252682772152,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0
|short_description=p5@Ptpn22
}}
}}

Latest revision as of 05:36, 27 September 2015

Short description:p5@Ptpn22
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Ptpn22_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 86bp_to_NM_008979, uc008qtv.1_5end
EntrezGene:Ptpn22
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Ptpn22

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7210.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2151.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E637.50
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F126.25
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I934.82
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A169.24
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D32.44
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A22.53
thymus, neonate N25.CNhs11125.1362-25G73.66
thymus, neonate N30.CNhs11132.1393-42G26.19
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell1.23e-2711
pro-T cell1.23e-2711
lymphoid lineage restricted progenitor cell3.97e-2512
mature alpha-beta T cell7.36e-249
alpha-beta T cell7.36e-249
immature T cell7.36e-249
mature T cell7.36e-249
immature alpha-beta T cell7.36e-249
lymphocyte5.26e-2313
common lymphoid progenitor5.26e-2313
CD4-positive, alpha-beta T cell2.79e-218
leukocyte5.16e-1717
nongranular leukocyte5.16e-1717
thymocyte1.84e-166
double negative thymocyte1.84e-166
naive T cell1.84e-166
double-positive, alpha-beta thymocyte1.84e-166
CD4-positive, alpha-beta thymocyte1.84e-166
naive thymus-derived CD4-positive, alpha-beta T cell1.84e-166
DN4 thymocyte1.84e-166
DN1 thymic pro-T cell1.84e-166
DN2 thymocyte1.84e-166
DN3 thymocyte1.84e-166
immature single positive thymocyte1.84e-166
early T lineage precursor1.84e-166
mature CD4 single-positive thymocyte1.84e-166
resting double-positive thymocyte1.84e-166
double-positive blast1.84e-166
CD69-positive double-positive thymocyte1.84e-166
CD69-positive, CD4-positive single-positive thymocyte1.84e-166
CD4-positive, CD8-intermediate double-positive thymocyte1.84e-166
CD24-positive, CD4 single-positive thymocyte1.84e-166
hematopoietic lineage restricted progenitor cell4.18e-1525
hematopoietic cell6.77e-1332
hematopoietic oligopotent progenitor cell6.77e-1332
hematopoietic stem cell6.77e-1332
hematopoietic multipotent progenitor cell6.77e-1332
connective tissue cell5.15e-0846
mesenchymal cell5.15e-0846
duct epithelial cell1.17e-073
epithelial cell of tracheobronchial tree1.17e-073
branched duct epithelial cell1.17e-073
epithelial cell of lower respiratory tract1.17e-073
respiratory epithelial cell1.17e-073
tracheal epithelial cell1.17e-073
tracheoblast1.17e-073

Uber anatomy
Ontology termp-valuen
segment of respiratory tract9.21e-3427
thymus4.05e-2923
neck4.05e-2923
respiratory system epithelium4.05e-2923
hemolymphoid system gland4.05e-2923
pharyngeal epithelium4.05e-2923
thymic region4.05e-2923
pharyngeal gland4.05e-2923
entire pharyngeal arch endoderm4.05e-2923
thymus primordium4.05e-2923
early pharyngeal endoderm4.05e-2923
pharynx9.84e-2824
gland of gut9.84e-2824
upper respiratory tract9.84e-2824
chordate pharynx9.84e-2824
pharyngeal arch system9.84e-2824
pharyngeal region of foregut9.84e-2824
respiratory tract7.97e-2341
hemopoietic organ3.05e-2229
immune organ3.05e-2229
respiratory system3.66e-2242
hemolymphoid system5.76e-1948
immune system5.76e-1948
mixed endoderm/mesoderm-derived structure9.97e-1835
craniocervical region4.02e-1736
hematopoietic system1.94e-1645
blood island1.94e-1645
anterior region of body1.12e-1343
gut epithelium7.94e-1055
foregut2.66e-0980
endocrine gland1.10e-0860
endo-epithelium4.79e-0869
connective tissue5.15e-0846
gland1.01e-0765
trachea1.17e-073
respiratory airway1.17e-073
tracheobronchial tree1.17e-073
lower respiratory tract1.17e-073
unilaminar epithelium1.51e-0766
lateral plate mesoderm2.67e-0787
digestive system3.55e-07116
digestive tract3.55e-07116
primitive gut3.55e-07116
endoderm-derived structure5.77e-07118
endoderm5.77e-07118
presumptive endoderm5.77e-07118
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