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FFCP PHASE1:Mm9::chr3:89324074..89324097,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:89324074..89324097,+
|DHSsupport=NA
|short_description=p1@Kcnn3
|DPIdataset=NA
|description=CAGE_peak_1_at_Kcnn3_5end
|association_with_transcript=0bp_to_ENSMUST00000000811,NM_080466,uc012cso.1_5end
|EntrezGene=140493
|EntrezGene=140493
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q3UUY9
|UniProt=Q3UUY9
|association_with_transcript=0bp_to_ENSMUST00000000811,NM_080466,uc012cso.1_5end
|cluster_id=chr3:89324074..89324097,+
|description=CAGE_peak_1_at_Kcnn3_5end
|id=chr3:89324074..89324097,+
|ontology_enrichment_celltype=CL:0000117!1.37e-09!23;CL:0000337!1.37e-09!23;CL:0000540!5.87e-07!33;CL:0000047!5.87e-07!33;CL:0000031!5.87e-07!33;CL:0000404!5.87e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.42e-10,23;CL:0000337,6.42e-10,23;CL:0000540,7.97e-07,33;CL:0000047,7.97e-07,33;CL:0000031,7.97e-07,33;CL:0000404,7.97e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.17e-16!73;UBERON:0005743!5.17e-16!73;UBERON:0001049!7.12e-15!52;UBERON:0005068!7.12e-15!52;UBERON:0006241!7.12e-15!52;UBERON:0007135!7.12e-15!52;UBERON:0000073!9.72e-15!75;UBERON:0001016!9.72e-15!75;UBERON:0000955!1.49e-14!50;UBERON:0006238!1.49e-14!50;UBERON:0002616!6.08e-14!49;UBERON:0002020!2.35e-13!34;UBERON:0003080!1.37e-12!40;UBERON:0002346!2.88e-12!71;UBERON:0003075!2.88e-12!71;UBERON:0007284!2.88e-12!71;UBERON:0002780!5.26e-12!39;UBERON:0001890!5.26e-12!39;UBERON:0006240!5.26e-12!39;UBERON:0000033!1.75e-11!63;UBERON:0000468!2.08e-11!333;UBERON:0004121!2.74e-11!102;UBERON:0000924!2.74e-11!102;UBERON:0006601!2.74e-11!102;UBERON:0002791!4.09e-11!29;UBERON:0003528!4.09e-11!29;UBERON:0001893!4.09e-11!29;UBERON:0003056!1.62e-10!49;UBERON:0000922!2.36e-08!328;UBERON:0000956!7.29e-08!21;UBERON:0001869!7.29e-08!21;UBERON:0000203!7.29e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.55e-17,54;UBERON:0001017,2.62e-16,73;UBERON:0001049,1.51e-15,52;UBERON:0005068,1.51e-15,52;UBERON:0006241,1.51e-15,52;UBERON:0007135,1.51e-15,52;UBERON:0001016,5.09e-15,75;UBERON:0002020,7.71e-14,34;UBERON:0000955,3.00e-13,47;UBERON:0006238,3.00e-13,47;UBERON:0003080,4.82e-13,40;UBERON:0002346,5.45e-13,64;UBERON:0003075,5.45e-13,64;UBERON:0007284,5.45e-13,64;UBERON:0002616,1.23e-12,46;UBERON:0002780,1.96e-12,39;UBERON:0001890,1.96e-12,39;UBERON:0006240,1.96e-12,39;UBERON:0003528,1.66e-11,29;UBERON:0002791,1.66e-11,29;UBERON:0001893,1.66e-11,29;UBERON:0004121,6.87e-11,95;UBERON:0000924,6.87e-11,95;UBERON:0006601,6.87e-11,95;UBERON:0010371,1.25e-10,73;UBERON:0003056,2.23e-10,49;UBERON:0010314,5.52e-10,92;UBERON:0000956,4.01e-08,21;UBERON:0001869,4.01e-08,21;UBERON:0000203,4.01e-08,21;UBERON:0002021,8.78e-07,10;UBERON:0000411,8.78e-07,10;UBERON:0001950,8.78e-07,10
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,0,3.2703773457067,1.09843091367236,1.55543919259427,2.65974201088189,2.87505128729943,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,6.06949382578793,6.87688273053643,5.70448263155561,0,0,0,0,0,1.49800055259202,3.84218305321555,8.39885859698669,8.6403800532282,6.73039876324422,6.28432165688368,4.41737081903227,2.69479758272899,2.68367318851062,3.67687514644008,13.2139057199266,17.6208526557559,18.7399970572617,6.59431438650969,6.95306091378313,2.08365348222704,8.65467296904281,7.87867654044352,14.0574387954665,13.8475435172624,15.9456282494995,7.64237727883732,0,0.151143120213571,1.15945795480671,0,0,0,0,0,1.54488862144927,0,0,0,2.25349471642689,0,0,0,1.94841936910093,2.02687892380079,3.0331466700887,0.34255163915718,0,2.3750742250372,3.29622120855658,3.04465478312141,1.61430848079241,1.50722640552623,3.99801604261396,0.628332956648377,0.988779870937496,1.59059292611903,0.884610551949874,3.23533699894818,0.883366073841574,0.969750506270444,1.86391761218122,2.92780797011547,1.46612694769419,2.04365644166873,0,0,0,11.6836698735762,32.4825428001225,6.91098936620754,9.56033761057521,6.64860189058859,25.7657175253855,17.1975738851823,7.94347038032467,1.36847667671102,0.758168275301024,0.841767423545896,0.780722657776222,1.60931473103431,2.70093194708024,2.10986744970001,1.83698547708585,2.0498195245576,2.62364828767241,2.58703370739016,0.646703978798527,3.40390944302075,5.10258260075452,2.41115305670332,4.72680323683516,6.61679116392116,5.76189981942242,2.58744546864041,0,0,0,0.414251545071004,1.17263029990548,1.98068267607116,4.49814997611899,4.32881309844288,2.46827380619805,2.55787339225449,2.41446061259657,2.10177616260905,2.13927804887525,4.76085645829376,3.72916523910936,3.21639972335731,2.63460138349261,1.07365135008297,10.3042074796422,5.45394445610208,0.330418782983798,3.96675849995316,2.55945900642281,4.41249676534833,6.82997545007095,6.45387278794696,6.89371935919098,6.46767128782701,8.54152310780121,5.27036655116835,6.53471542880701,3.58121649674071,5.06906626509712,3.59527763461689,6.70027954611552,5.97423819763102,1.13800740571849,2.17072173958485,5.63538678365402,1.22190796707189,1.93952487167626,1.40271639780637,1.96033265085198,1.03327103585722,0.941992367048249,0.616985819609003,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.549122826376163,1.43768206527355,0,0.624075346229121,0.252578877947112,0.538192240565737,0,5.17308932466493,1.32643988239339,1.46668478797823,0.678980343100753,0.938760993154008,0.335012514883631,0.714130922658041,2.14647012643579,4.57141917907954,5.09368786192182,2.55127629851979,3.60499292374624,5.69860440157455,6.36455857758651,0,0,1.96705709207614,2.20749397043786,7.70642831941401,5.62616095642575,0,2.52470927204373,2.2085575359138,1.56175497718655,6.46270193198397,0,0.891194696329576,1.98153571552183,2.02405350837447,2.33804686329049,3.55759000151871,12.5315313404505,3.83238230062325,6.94455854302295,7.16702621155735,28.2098910283036,3.98235415019888,5.09839335925461,1.81394134178851,1.88605079755898,3.2483208216885,4.30409207121498,2.84271122485043,2.18120237686503,2.85197902707777,8.84902922220285,6.32511651449993,6.18813259489121,11.5749465956288,1.8006109403131,1.55230420539305,1.71469628025274,7.27094957933322,3.0322698992352,3.45552943264454,2.13125464380219,0.23467170806371,0,2.64634077665954,2.63818004706368,2.26050197374268,1.32688434841943,0.358117032009409,0.820704498725306,10.2018292820448,8.90041449650446,0.341741761595705,2.27025554759545,2.59272338317596,0,0.27338845544205,0,0,0,0,3.81868247206045,2.21435195506795,5.89626454667861,5.50827238191186,6.89991376847747,6.33251434863915,7.28267470478032,12.4806718145257,9.6849698534091,6.73997861117323,0,0,3.43888055901151,1.15820943319968,3.50012139019286,2.97067593998782,4.56181538825101,4.5769323071844,2.99470085141085,0.629156066554265,0,0,0,2.02725215290164,0.718976700153791,0.649604114888975,0.537080087002444,0,0.360586348559907,0.738447635872886,0.403865799792591,0.0762068066549998,0.302478555410522,0.487289403698762,0.481059208201647,0.350630706544707,3.62768613784338,0,0.0897138566094757,0.335769232728157,11.7845652359636,6.75656911624255,12.0880072016395,2.35805216986972,2.50786052017682,10.7302850097243,8.28585425712918,13.7494923225455,8.07709957015332,6.85082519770642,7.55393897389701,8.77529250301348,7.20513925158753,8.15656336171568,7.24864436452548,1.3492355185943,2.79317411380722,2.90247129782028,5.59145449257076,1.88651846365184,2.20612210140017,4.22268782823069,5.15087643097235,4.81378814387723,5.81203587056734,6.33698249725599,6.79054828989874,5.61849044819294,6.21043978327232,6.83482080571798,4.76293691283074,3.94006708212509,5.40145817298374,7.82963211526283,5.2991611248383,3.42869252385415,3.90446773550542,4.5302876089991,3.6336604158082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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,0,3.2703773457067,1.09843091367236,1.55543919259427,2.65974201088189,2.87505128729943,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,6.06949382578793,6.87688273053643,5.70448263155561,0,0,0,0,0,1.49800055259202,3.84218305321555,8.39885859698669,8.6403800532282,6.73039876324422,6.28432165688368,4.41737081903227,2.69479758272899,2.68367318851062,3.67687514644008,13.2139057199266,17.6208526557559,18.7399970572617,6.59431438650969,6.95306091378313,2.08365348222704,8.65467296904281,7.87867654044352,14.0574387954665,13.8475435172624,15.9456282494995,7.64237727883732,0,0.151143120213571,1.15945795480671,0,0,0,0,0,1.54488862144927,0,0,0,2.25349471642689,0,0,0,1.94841936910093,2.02687892380079,3.0331466700887,0.34255163915718,0,2.3750742250372,3.29622120855658,3.04465478312141,1.61430848079241,1.50722640552623,3.99801604261396,0.628332956648377,0.988779870937496,1.59059292611903,0.884610551949874,3.23533699894818,0.883366073841574,0.969750506270444,1.86391761218122,2.92780797011547,1.46612694769419,2.04365644166873,0,0,0,11.6836698735762,32.4825428001225,6.91098936620754,9.56033761057521,6.64860189058859,25.7657175253855,17.1975738851823,7.94347038032467,1.36847667671102,0.758168275301024,0.841767423545896,0.780722657776222,1.60931473103431,2.70093194708024,2.10986744970001,1.83698547708585,2.0498195245576,2.62364828767241,2.58703370739016,0.646703978798527,3.40390944302075,5.10258260075452,2.41115305670332,4.72680323683516,6.61679116392116,5.76189981942242,2.58744546864041,0,0,0,0.414251545071004,1.17263029990548,1.98068267607116,4.49814997611899,4.32881309844288,2.46827380619805,2.55787339225449,2.41446061259657,2.10177616260905,2.13927804887525,4.76085645829376,3.72916523910936,3.21639972335731,2.63460138349261,1.07365135008297,10.3042074796422,5.45394445610208,0.330418782983798,3.96675849995316,2.55945900642281,4.41249676534833,6.82997545007095,6.45387278794696,6.89371935919098,6.46767128782701,8.54152310780121,5.27036655116835,6.53471542880701,3.58121649674071,5.06906626509712,3.59527763461689,6.70027954611552,5.97423819763102,1.13800740571849,2.17072173958485,5.63538678365402,1.22190796707189,1.93952487167626,1.40271639780637,1.96033265085198,1.03327103585722,0.941992367048249,0.616985819609003,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.549122826376163,1.43768206527355,0,0.624075346229121,0.252578877947112,0.538192240565737,0,5.17308932466493,1.32643988239339,1.46668478797823,0.678980343100753,0.938760993154008,0.335012514883631,0.714130922658041,2.14647012643579,4.57141917907954,5.09368786192182,2.55127629851979,3.60499292374624,5.69860440157455,6.36455857758651,0,0,1.96705709207614,2.20749397043786,7.70642831941401,5.62616095642575,0,2.52470927204373,2.2085575359138,1.56175497718655,6.46270193198397,0,0.891194696329576,1.98153571552183,2.02405350837447,2.33804686329049,3.55759000151871,12.5315313404505,3.83238230062325,6.94455854302295,7.16702621155735,28.2098910283036,3.98235415019888,5.09839335925461,1.81394134178851,1.88605079755898,3.2483208216885,4.30409207121498,2.84271122485043,2.18120237686503,2.85197902707777,8.84902922220285,6.32511651449993,6.18813259489121,11.5749465956288,1.8006109403131,1.55230420539305,1.71469628025274,7.27094957933322,3.0322698992352,3.45552943264454,2.13125464380219,0.23467170806371,0,2.64634077665954,2.63818004706368,2.26050197374268,1.32688434841943,0.358117032009409,0.820704498725306,10.2018292820448,8.90041449650446,0.341741761595705,2.27025554759545,2.59272338317596,0,0.27338845544205,0,0,0,0,3.81868247206045,2.21435195506795,5.89626454667861,5.50827238191186,6.89991376847747,6.33251434863915,7.28267470478032,12.4806718145257,9.6849698534091,6.73997861117323,0,0,3.43888055901151,1.15820943319968,3.50012139019286,2.97067593998782,4.56181538825101,4.5769323071844,2.99470085141085,0.629156066554265,0,0,0,2.02725215290164,0.718976700153791,0.649604114888975,0.537080087002444,0,0.360586348559907,0.738447635872886,0.403865799792591,0.0762068066549998,0.302478555410522,0.487289403698762,0.481059208201647,0.350630706544707,3.62768613784338,0,0.0897138566094757,0.335769232728157,11.7845652359636,6.75656911624255,12.0880072016395,2.35805216986972,2.50786052017682,10.7302850097243,8.28585425712918,13.7494923225455,8.07709957015332,6.85082519770642,7.55393897389701,8.77529250301348,7.20513925158753,8.15656336171568,7.24864436452548,1.3492355185943,2.79317411380722,2.90247129782028,5.59145449257076,1.88651846365184,2.20612210140017,4.22268782823069,5.15087643097235,4.81378814387723,5.81203587056734,6.33698249725599,6.79054828989874,5.61849044819294,6.21043978327232,6.83482080571798,4.76293691283074,3.94006708212509,5.40145817298374,7.82963211526283,5.2991611248383,3.42869252385415,3.90446773550542,4.5302876089991,3.6336604158082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|short_description=p1@Kcnn3
}}
}}

Latest revision as of 20:45, 25 September 2015

Short description:p1@Kcnn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kcnn3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000000811, NM_080466, uc012cso.1_5end
EntrezGene:Kcnn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kcnn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C36.07
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.40
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.74
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.65
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.68
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D59.56
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F225.77
diencephalon, neonate N30.CNhs11201.1388-42B217.20
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.94
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E25.10
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G14.76
heart, neonate N16.CNhs11209.782-15G13.73
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D86.83
intestine, embryo E16.CNhs10585.463-22H46.45
intestine, embryo E17.CNhs10582.482-18D36.89
intestine, embryo E18.CNhs10526.1289-20F76.47
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E95.27
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D51.96
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B15.17
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H26.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I73.83
ovary, embryo E18.CNhs11040.505-44H76.94
ovary, neonate N00.CNhs11217.1299-22I47.17
oviduct, adult pregnant day01.CNhs10500.988-6G628.21
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G811.57
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B97.27
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D45.51
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B87.28
stomach, neonate N07.CNhs11210.718-18A912.48
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I16.74
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B74.58
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E411.78
uterus, adult pregnant day19.CNhs10497.590-15F56.76
uterus, adult.CNhs10509.92-27E512.09
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.42e-1023
neuroblast (sensu Vertebrata)6.42e-1023
neuron7.97e-0733
neuronal stem cell7.97e-0733
neuroblast7.97e-0733
electrically signaling cell7.97e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.55e-1754
central nervous system2.62e-1673
neural tube1.51e-1552
neural rod1.51e-1552
future spinal cord1.51e-1552
neural keel1.51e-1552
nervous system5.09e-1575
gray matter7.71e-1434
brain3.00e-1347
future brain3.00e-1347
anterior neural tube4.82e-1340
neurectoderm5.45e-1364
neural plate5.45e-1364
presumptive neural plate5.45e-1364
regional part of brain1.23e-1246
regional part of forebrain1.96e-1239
forebrain1.96e-1239
future forebrain1.96e-1239
brain grey matter1.66e-1129
regional part of telencephalon1.66e-1129
telencephalon1.66e-1129
ectoderm-derived structure6.87e-1195
ectoderm6.87e-1195
presumptive ectoderm6.87e-1195
ecto-epithelium1.25e-1073
pre-chordal neural plate2.23e-1049
structure with developmental contribution from neural crest5.52e-1092
cerebral cortex4.01e-0821
cerebral hemisphere4.01e-0821
pallium4.01e-0821
occipital lobe8.78e-0710
visual cortex8.78e-0710
neocortex8.78e-0710
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