FFCP PHASE1:Mm9::chr7:13466514..13466553,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:13466514..13466553,+ to FFCP PHASE1:Mm9::chr7:13466514..13466553,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=243833 | |EntrezGene=243833 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=376 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGV5,Q8BJ50 | |UniProt=Q8BGV5,Q8BJ50 | ||
|association_with_transcript=0bp_to_ENSMUST00000081891,ENSMUST00000144578,NM_153802,uc009fek.2,uc012ezc.1_5end | |||
|cluster_id=chr7:13466514..13466553,+ | |||
|description=CAGE_peak_1_at_Zfp128_5end | |||
|id=chr7:13466514..13466553,+ | |||
|ontology_enrichment_celltype=CL:0000540!8.96e-12!33;CL:0000047!8.96e-12!33;CL:0000031!8.96e-12!33;CL:0000404!8.96e-12!33;CL:0000117!1.68e-11!23;CL:0000337!1.68e-11!23;CL:0000393!1.04e-09!39;CL:0000211!1.04e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.76e-12,33;CL:0000047,8.76e-12,33;CL:0000031,8.76e-12,33;CL:0000404,8.76e-12,33;CL:0000117,1.65e-11,23;CL:0000337,1.65e-11,23;CL:0000393,1.02e-09,39;CL:0000211,1.02e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.04e-17!73;UBERON:0005743!1.04e-17!73;UBERON:0002346!2.08e-17!71;UBERON:0003075!2.08e-17!71;UBERON:0007284!2.08e-17!71;UBERON:0000073!1.08e-16!75;UBERON:0001016!1.08e-16!75;UBERON:0000033!2.51e-16!63;UBERON:0001049!3.31e-16!52;UBERON:0005068!3.31e-16!52;UBERON:0006241!3.31e-16!52;UBERON:0007135!3.31e-16!52;UBERON:0000955!3.76e-16!50;UBERON:0006238!3.76e-16!50;UBERON:0002616!1.72e-15!49;UBERON:0003056!3.37e-15!49;UBERON:0004121!2.70e-14!102;UBERON:0000924!2.70e-14!102;UBERON:0006601!2.70e-14!102;UBERON:0003080!3.54e-14!40;UBERON:0002780!1.42e-13!39;UBERON:0001890!1.42e-13!39;UBERON:0006240!1.42e-13!39;UBERON:0002020!2.57e-12!34;UBERON:0002791!2.68e-11!29;UBERON:0003528!2.68e-11!29;UBERON:0001893!2.68e-11!29;UBERON:0000153!3.44e-11!94;UBERON:0007811!2.13e-09!86;UBERON:0000025!1.32e-08!114;UBERON:0004111!9.44e-08!122;UBERON:0000956!3.79e-07!21;UBERON:0001869!3.79e-07!21;UBERON:0000203!3.79e-07!21;UBERON:0000468!3.94e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.12e-18,64;UBERON:0003075,3.12e-18,64;UBERON:0007284,3.12e-18,64;UBERON:0001017,1.30e-17,73;UBERON:0000073,1.25e-16,54;UBERON:0001016,1.34e-16,75;UBERON:0001049,3.74e-16,52;UBERON:0005068,3.74e-16,52;UBERON:0006241,3.74e-16,52;UBERON:0007135,3.74e-16,52;UBERON:0010314,1.10e-15,92;UBERON:0003056,3.27e-15,49;UBERON:0000955,4.55e-15,47;UBERON:0006238,4.55e-15,47;UBERON:0010371,9.52e-15,73;UBERON:0004121,1.81e-14,95;UBERON:0000924,1.81e-14,95;UBERON:0006601,1.81e-14,95;UBERON:0002616,2.05e-14,46;UBERON:0003080,3.44e-14,40;UBERON:0002780,1.38e-13,39;UBERON:0001890,1.38e-13,39;UBERON:0006240,1.38e-13,39;UBERON:0002020,2.51e-12,34;UBERON:0003528,2.62e-11,29;UBERON:0002791,2.62e-11,29;UBERON:0001893,2.62e-11,29;UBERON:0000025,1.40e-08,114;UBERON:0004111,1.00e-07,122;UBERON:0000956,3.75e-07,21;UBERON:0001869,3.75e-07,21;UBERON:0000203,3.75e-07,21 | |||
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| ||
|short_description=p1@Zfp128 | |||
}} | }} |
Latest revision as of 22:52, 25 September 2015
Short description: | p1@Zfp128 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp128_5end |
Coexpression cluster: | MCL_coexpression_mm9:376 |
Association with transcript: | 0bp_to_ENSMUST00000081891, ENSMUST00000144578, NM_153802, uc009fek.2, uc012ezc.1_5end |
EntrezGene: | Zfp128 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.76e-12 | 33 |
neuronal stem cell | 8.76e-12 | 33 |
neuroblast | 8.76e-12 | 33 |
electrically signaling cell | 8.76e-12 | 33 |
CNS neuron (sensu Vertebrata) | 1.65e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.65e-11 | 23 |
electrically responsive cell | 1.02e-09 | 39 |
electrically active cell | 1.02e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.12e-18 | 64 |
neural plate | 3.12e-18 | 64 |
presumptive neural plate | 3.12e-18 | 64 |
central nervous system | 1.30e-17 | 73 |
regional part of nervous system | 1.25e-16 | 54 |
nervous system | 1.34e-16 | 75 |
neural tube | 3.74e-16 | 52 |
neural rod | 3.74e-16 | 52 |
future spinal cord | 3.74e-16 | 52 |
neural keel | 3.74e-16 | 52 |
structure with developmental contribution from neural crest | 1.10e-15 | 92 |
pre-chordal neural plate | 3.27e-15 | 49 |
brain | 4.55e-15 | 47 |
future brain | 4.55e-15 | 47 |
ecto-epithelium | 9.52e-15 | 73 |
ectoderm-derived structure | 1.81e-14 | 95 |
ectoderm | 1.81e-14 | 95 |
presumptive ectoderm | 1.81e-14 | 95 |
regional part of brain | 2.05e-14 | 46 |
anterior neural tube | 3.44e-14 | 40 |
regional part of forebrain | 1.38e-13 | 39 |
forebrain | 1.38e-13 | 39 |
future forebrain | 1.38e-13 | 39 |
gray matter | 2.51e-12 | 34 |
brain grey matter | 2.62e-11 | 29 |
regional part of telencephalon | 2.62e-11 | 29 |
telencephalon | 2.62e-11 | 29 |
tube | 1.40e-08 | 114 |
anatomical conduit | 1.00e-07 | 122 |
cerebral cortex | 3.75e-07 | 21 |
cerebral hemisphere | 3.75e-07 | 21 |
pallium | 3.75e-07 | 21 |