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FFCP PHASE1:Mm9::chrX:53627727..53627794,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:53627727..53627794,+
|DHSsupport=NA
|short_description=p1@Ncrna00086
|DPIdataset=NA
|description=CAGE_peak_1_at_Ncrna00086_5end
|association_with_transcript=0bp_to_ENSMUST00000068106,NR_028086,uc009tgd.2_5end
|EntrezGene=320237
|EntrezGene=320237
|HGNC=
|HGNC=
|MCL_coexpression_id=1296
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000068106,NR_028086,uc009tgd.2_5end
|cluster_id=chrX:53627727..53627794,+
|description=CAGE_peak_1_at_Ncrna00086_5end
|id=chrX:53627727..53627794,+
|ontology_enrichment_celltype=CL:0000117!7.59e-12!23;CL:0000337!7.59e-12!23;CL:0000540!1.67e-08!33;CL:0000047!1.67e-08!33;CL:0000031!1.67e-08!33;CL:0000404!1.67e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.24e-13,23;CL:0000337,6.24e-13,23;CL:0000540,4.03e-08,33;CL:0000047,4.03e-08,33;CL:0000031,4.03e-08,33;CL:0000404,4.03e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.06e-19!63;UBERON:0001049!5.77e-19!52;UBERON:0005068!5.77e-19!52;UBERON:0006241!5.77e-19!52;UBERON:0007135!5.77e-19!52;UBERON:0001017!9.76e-18!73;UBERON:0005743!9.76e-18!73;UBERON:0002346!4.48e-17!71;UBERON:0003075!4.48e-17!71;UBERON:0007284!4.48e-17!71;UBERON:0000955!7.62e-17!50;UBERON:0006238!7.62e-17!50;UBERON:0002616!8.03e-17!49;UBERON:0000073!2.39e-16!75;UBERON:0001016!2.39e-16!75;UBERON:0003056!9.50e-16!49;UBERON:0004121!9.16e-14!102;UBERON:0000924!9.16e-14!102;UBERON:0006601!9.16e-14!102;UBERON:0003080!9.63e-14!40;UBERON:0002780!2.82e-13!39;UBERON:0001890!2.82e-13!39;UBERON:0006240!2.82e-13!39;UBERON:0002020!7.45e-13!34;UBERON:0002791!1.32e-09!29;UBERON:0003528!1.32e-09!29;UBERON:0001893!1.32e-09!29;UBERON:0000153!1.79e-09!94;UBERON:0007811!2.63e-09!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.13e-21,54;UBERON:0002346,1.28e-20,64;UBERON:0003075,1.28e-20,64;UBERON:0007284,1.28e-20,64;UBERON:0001049,1.54e-19,52;UBERON:0005068,1.54e-19,52;UBERON:0006241,1.54e-19,52;UBERON:0007135,1.54e-19,52;UBERON:0001017,1.02e-17,73;UBERON:0010371,2.36e-17,73;UBERON:0003056,8.97e-17,49;UBERON:0001016,1.44e-16,75;UBERON:0004121,1.74e-15,95;UBERON:0000924,1.74e-15,95;UBERON:0006601,1.74e-15,95;UBERON:0000955,4.58e-15,47;UBERON:0006238,4.58e-15,47;UBERON:0002616,5.12e-15,46;UBERON:0003080,1.98e-14,40;UBERON:0002780,6.71e-14,39;UBERON:0001890,6.71e-14,39;UBERON:0006240,6.71e-14,39;UBERON:0002020,2.35e-13,34;UBERON:0003528,1.04e-09,29;UBERON:0002791,1.04e-09,29;UBERON:0001893,1.04e-09,29;UBERON:0010314,2.02e-09,92;UBERON:0002021,7.81e-07,10;UBERON:0000411,7.81e-07,10;UBERON:0001950,7.81e-07,10
|phase1_expression=6.24580503708696,0,0,0,0,0.16787927191189,0,2.06597317506522,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,4.33720779770456,0.198581902401771,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.25896817975577,0.506884656097573,0.917733760808408,0.782391344348039,0.65407546914134,0.219686182734472,0.388859798148567,1.39986421625363,0,0,1.45072428402269,0.336093799142464,0.514518872071894,0,0,8.6996078169627,12.1667925232568,7.60597684207415,0,0,0,0,0,0.299600110518405,0,1.24427534770173,1.21505344498522,2.73422449756797,40.8480907697439,30.7007271922743,1.83736198822431,0.862609239164127,3.67687514644008,13.2139057199266,9.57655035638908,11.981309593987,9.23204014111357,8.23388792421687,8.85552729946492,17.8677119360884,12.9435400307286,10.0846843532695,30.0521157183141,27.4777343942269,16.7759501242771,0,0.151143120213571,1.44932244350839,0,0,0,0,0,0.842666520790511,0,0,0,7.46470124816407,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,1.1418387971906,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.60289056221049,0.587943535678524,0.628332956648377,0.988779870937496,0.289198713839823,0,0.485300549842228,0.220841518460394,0,0,2.34224637609238,4.1889341362691,0.255457055208591,0.599075622529601,0,1.01656181658452,4.79330046095433,0.915001205637253,3.8952849154988,4.69325664519146,4.85859368927628,4.77912502486988,6.16516799657479,1.32391173005411,0.622034853050465,5.55990068554084,1.26265113531884,2.08192708740326,3.21862946206862,2.52086981727489,2.56198190320716,2.51735046859913,2.0498195245576,2.34254311399322,3.10444044886819,2.37124792226126,1.89106080167819,2.99116911078713,1.97276159184817,1.66828349535359,0.696504333044333,0.411564272815887,2.38841120182192,0,0,0,1.44988040774851,0.703578179943289,0.720248245844059,0.473489471170421,0.393528463494808,0.154267112887378,0.465067889500816,0.536546802799238,0.350296027101508,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0,3.15434922846191,3.70456604565424,0.330418782983798,0.264450566663544,2.13288250535234,2.78684006232526,1.80414445850931,1.61346819698674,1.33426826306922,1.14135375667535,0.474529061544512,1.31759163779209,0.754005626400808,0.198956472041151,1.16978452271472,0,0.216138049874694,1.1948476395262,2.84501851429623,2.62771579002376,2.25415471346161,1.4255592949172,1.35766741017338,1.75339549725796,1.51767689098217,0.295220295959204,0.941992367048249,0.616985819609003,0,0.166845105716094,0.786235980452812,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0.324270453550071,0,0,0,0,0,0,0,0.923765950833023,4.16881105895066,2.44447464663039,1.69745085775188,1.17345124144251,0.670025029767263,0.238043640886014,0.975668239288994,0.315270288212382,0.44292937929755,0.478364305972461,0.81931657357869,0.690739927463582,0.723245292907558,0,0,0,0.551873492609465,6.74312477948726,11.1351102262593,0,0,0.315508219416257,1.56175497718655,0.430846795465598,0.238968797952552,0.891194696329576,0,0.809621403349789,1.46127928955656,0.395287777946524,1.60660658210904,6.52924391958036,1.78065603667255,1.95464351224291,0.329940245945071,3.98235415019888,3.39892890616974,3.32555912661226,2.64047111658257,5.31543407185391,4.91896236710284,2.84271122485043,3.63533729477506,3.92147116223193,5.05658812697306,7.37930260024991,2.06271086496374,1.70219802876894,2.88097750450096,4.39819524861365,3.42939256050548,2.30542303734956,3.92411398724555,4.60737257685939,5.78483403317739,0.704015124191131,2.1183207086382,0.441056796109924,0.16488625294148,0.484393280087717,0.361877549568935,0.119372344003136,0,0.582961673259701,7.41701208042039,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,2.71965487990169,2.6590775941495,2.62579950228405,0.954670618015114,2.05618395827738,2.03319467126849,1.40406943068342,0.418176592028937,0.87345025498471,0.944050424693745,1.07449492442937,0.26175594198403,0.90730481304255,1.86401793926078,13.5286305284206,0.897099276263873,1.15820943319968,1.16670713006429,3.7456348808542,2.19642963138012,2.58185925020659,2.99470085141085,8.17902886520545,14.4950472495604,12.3852902690882,0,2.02725215290164,1.84879722896689,1.03936658382236,0.179026695667481,0.596044064343795,0.721172697119813,0.443068581523732,0.100966449948148,0.15241361331,0.403304740547362,0.194915761479505,0.0962118416403295,0.350630706544707,0.226730383615211,5.10567692760349,3.22969883794113,2.18250001273302,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,3.00943262421218,5.64751842617067,5.9842280745933,6.30185064783336,6.8741272937475,3.42541259885321,5.2877572817279,6.75022500231806,5.85417564191487,3.62513927187364,4.65984280576638,1.66059756134683,1.59609949360412,1.36586884603307,0.729320151204882,1.67690530102386,2.75765262675021,0.888986911206461,1.03017528619447,0.962757628775446,1.51618327058278,1.77435509923168,1.32038438970253,1.87283014939765,2.24088033417042,1.55075766180156,0.476293691283074,2.0859178670074,1.92909220463705,1.64834360321323,1.17759136107518,2.05721551431249,1.4198064492747,2.38436189947321,1.0174249164263,1.78807822789128,1.60767754994185,1.82927972872773,1.31534855718921,1.08643291076689,1.68342681497322,2.01679530811096,2.1670986122624,2.04615521584845,1.08455788830176,1.35034627686799,3.2475375131933,1.16965804222704,1.07435527024149,1.72159498861959,1.10295709559758,0.927471342481686
|phase1_expression=6.24580503708696,0,0,0,0,0.16787927191189,0,2.06597317506522,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,4.33720779770456,0.198581902401771,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.25896817975577,0.506884656097573,0.917733760808408,0.782391344348039,0.65407546914134,0.219686182734472,0.388859798148567,1.39986421625363,0,0,1.45072428402269,0.336093799142464,0.514518872071894,0,0,8.6996078169627,12.1667925232568,7.60597684207415,0,0,0,0,0,0.299600110518405,0,1.24427534770173,1.21505344498522,2.73422449756797,40.8480907697439,30.7007271922743,1.83736198822431,0.862609239164127,3.67687514644008,13.2139057199266,9.57655035638908,11.981309593987,9.23204014111357,8.23388792421687,8.85552729946492,17.8677119360884,12.9435400307286,10.0846843532695,30.0521157183141,27.4777343942269,16.7759501242771,0,0.151143120213571,1.44932244350839,0,0,0,0,0,0.842666520790511,0,0,0,7.46470124816407,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,1.1418387971906,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.60289056221049,0.587943535678524,0.628332956648377,0.988779870937496,0.289198713839823,0,0.485300549842228,0.220841518460394,0,0,2.34224637609238,4.1889341362691,0.255457055208591,0.599075622529601,0,1.01656181658452,4.79330046095433,0.915001205637253,3.8952849154988,4.69325664519146,4.85859368927628,4.77912502486988,6.16516799657479,1.32391173005411,0.622034853050465,5.55990068554084,1.26265113531884,2.08192708740326,3.21862946206862,2.52086981727489,2.56198190320716,2.51735046859913,2.0498195245576,2.34254311399322,3.10444044886819,2.37124792226126,1.89106080167819,2.99116911078713,1.97276159184817,1.66828349535359,0.696504333044333,0.411564272815887,2.38841120182192,0,0,0,1.44988040774851,0.703578179943289,0.720248245844059,0.473489471170421,0.393528463494808,0.154267112887378,0.465067889500816,0.536546802799238,0.350296027101508,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0,3.15434922846191,3.70456604565424,0.330418782983798,0.264450566663544,2.13288250535234,2.78684006232526,1.80414445850931,1.61346819698674,1.33426826306922,1.14135375667535,0.474529061544512,1.31759163779209,0.754005626400808,0.198956472041151,1.16978452271472,0,0.216138049874694,1.1948476395262,2.84501851429623,2.62771579002376,2.25415471346161,1.4255592949172,1.35766741017338,1.75339549725796,1.51767689098217,0.295220295959204,0.941992367048249,0.616985819609003,0,0.166845105716094,0.786235980452812,0.224862112384854,0,0.241177159752417,0.25462585178142,0,0.324270453550071,0,0,0,0,0,0,0,0.923765950833023,4.16881105895066,2.44447464663039,1.69745085775188,1.17345124144251,0.670025029767263,0.238043640886014,0.975668239288994,0.315270288212382,0.44292937929755,0.478364305972461,0.81931657357869,0.690739927463582,0.723245292907558,0,0,0,0.551873492609465,6.74312477948726,11.1351102262593,0,0,0.315508219416257,1.56175497718655,0.430846795465598,0.238968797952552,0.891194696329576,0,0.809621403349789,1.46127928955656,0.395287777946524,1.60660658210904,6.52924391958036,1.78065603667255,1.95464351224291,0.329940245945071,3.98235415019888,3.39892890616974,3.32555912661226,2.64047111658257,5.31543407185391,4.91896236710284,2.84271122485043,3.63533729477506,3.92147116223193,5.05658812697306,7.37930260024991,2.06271086496374,1.70219802876894,2.88097750450096,4.39819524861365,3.42939256050548,2.30542303734956,3.92411398724555,4.60737257685939,5.78483403317739,0.704015124191131,2.1183207086382,0.441056796109924,0.16488625294148,0.484393280087717,0.361877549568935,0.119372344003136,0,0.582961673259701,7.41701208042039,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,2.71965487990169,2.6590775941495,2.62579950228405,0.954670618015114,2.05618395827738,2.03319467126849,1.40406943068342,0.418176592028937,0.87345025498471,0.944050424693745,1.07449492442937,0.26175594198403,0.90730481304255,1.86401793926078,13.5286305284206,0.897099276263873,1.15820943319968,1.16670713006429,3.7456348808542,2.19642963138012,2.58185925020659,2.99470085141085,8.17902886520545,14.4950472495604,12.3852902690882,0,2.02725215290164,1.84879722896689,1.03936658382236,0.179026695667481,0.596044064343795,0.721172697119813,0.443068581523732,0.100966449948148,0.15241361331,0.403304740547362,0.194915761479505,0.0962118416403295,0.350630706544707,0.226730383615211,5.10567692760349,3.22969883794113,2.18250001273302,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,3.00943262421218,5.64751842617067,5.9842280745933,6.30185064783336,6.8741272937475,3.42541259885321,5.2877572817279,6.75022500231806,5.85417564191487,3.62513927187364,4.65984280576638,1.66059756134683,1.59609949360412,1.36586884603307,0.729320151204882,1.67690530102386,2.75765262675021,0.888986911206461,1.03017528619447,0.962757628775446,1.51618327058278,1.77435509923168,1.32038438970253,1.87283014939765,2.24088033417042,1.55075766180156,0.476293691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|short_description=p1@Ncrna00086
}}
}}

Latest revision as of 21:50, 1 October 2015

Short description:p1@Ncrna00086
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ncrna00086_5end
Coexpression cluster:MCL_coexpression_mm9:1296
Association with transcript: 0bp_to_ENSMUST00000068106, NR_028086, uc009tgd.2_5end
EntrezGene:Ncrna00086
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ncrna00086

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.70
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F140.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D530.70
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.23
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.87
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D630.05
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A311.14
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I76.53
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C97.42
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I53.75
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D98.18
testis, neonate N20.CNhs11110.839-18H314.50
testis, neonate N30.CNhs11130.1391-42E212.39
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.24e-1323
neuroblast (sensu Vertebrata)6.24e-1323
neuron4.03e-0833
neuronal stem cell4.03e-0833
neuroblast4.03e-0833
electrically signaling cell4.03e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.13e-2154
neurectoderm1.28e-2064
neural plate1.28e-2064
presumptive neural plate1.28e-2064
neural tube1.54e-1952
neural rod1.54e-1952
future spinal cord1.54e-1952
neural keel1.54e-1952
central nervous system1.02e-1773
ecto-epithelium2.36e-1773
pre-chordal neural plate8.97e-1749
nervous system1.44e-1675
ectoderm-derived structure1.74e-1595
ectoderm1.74e-1595
presumptive ectoderm1.74e-1595
brain4.58e-1547
future brain4.58e-1547
regional part of brain5.12e-1546
anterior neural tube1.98e-1440
regional part of forebrain6.71e-1439
forebrain6.71e-1439
future forebrain6.71e-1439
gray matter2.35e-1334
brain grey matter1.04e-0929
regional part of telencephalon1.04e-0929
telencephalon1.04e-0929
structure with developmental contribution from neural crest2.02e-0992
occipital lobe7.81e-0710
visual cortex7.81e-0710
neocortex7.81e-0710
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