FFCP PHASE1:Mm9::chr11:44431626..44431637,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13591 | |EntrezGene=13591 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=243 | |||
|TSSclassifier=NA | |||
|UniProt=Q07802,Q5SWK5,Q3V317,Q8K4J2,O08791 | |UniProt=Q07802,Q5SWK5,Q3V317,Q8K4J2,O08791 | ||
|association_with_transcript=0bp_to_NM_007897,uc007inj.1,uc007ink.1,uc007inl.1,uc007inm.1,uc007inn.1_5end | |association_with_transcript=0bp_to_NM_007897,uc007inj.1,uc007ink.1,uc007inl.1,uc007inm.1,uc007inn.1_5end | ||
|cluster_id=chr11:44431626..44431637,+ | |||
|description=CAGE_peak_10_at_Ebf1_5end | |description=CAGE_peak_10_at_Ebf1_5end | ||
|id=chr11:44431626..44431637,+ | |id=chr11:44431626..44431637,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.59e-11,23;CL:0000337,3.59e-11,23;CL:0000540,2.11e-08,33;CL:0000047,2.11e-08,33;CL:0000031,2.11e-08,33;CL:0000404,2.11e-08,33;CL:0002293,3.09e-08,3;CL:0002612,4.94e-08,3;CL:0002608,3.00e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.14e-11,5;UBERON:0002315,1.14e-11,5;UBERON:0002240,1.22e-09,6;UBERON:0005174,1.22e-09,6;UBERON:0001137,1.22e-09,6;UBERON:0000075,5.35e-09,6;UBERON:0005856,5.35e-09,6;UBERON:0005866,5.35e-09,6;UBERON:0005863,5.35e-09,6;UBERON:0002257,4.94e-08,3 | |||
|phase1_expression=3.04282809499109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,1.39912375625629,3.62781490161973,2.33094537129756,2.12194825899015,0.595303031057488,0.397163804803541,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0,0,0,0,0,0,0,1.8456086666351,0,0,0.514518872071894,0.573066879877513,0,1.01158230429799,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0,0.135005938331691,0,1.71390590642282,1.54607978666129,1.46988959057945,2.49198224647415,1.83843757322004,0,0,0.153606533256243,0.395658863190582,0.640413505216868,0,0,1.12552522006336,0.61119299110724,5.59794312399969,3.70166370077668,3.54158947068071,0.075726193333184,0.302286240427142,0.579728977403356,0,0,0,0,0,0.280888840263504,0.852151612890289,1.29893002301434,0.70667914902068,1.97180787687353,5.13305909657271,12.7402619853323,7.11066703153331,0,0,0,0.34255163915718,1.29468941823586,0,0.173485326766136,0,0,0.301445281105245,0.470354828542819,0.376999773989026,0,0.578397427679647,0,1.29413479957927,2.20841518460394,1.45462575940567,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,1.88481528169297,0,0,0,0,0.509196819251581,1.11966273549084,0,0,0.780722657776222,0,0.540186389416048,0.30140963567143,0.476255494059295,0.768682321709099,0.562210347358373,0,0.862271971731369,0.756424320671277,1.05570674498369,1.53437012699302,0.278047249225598,0,0.823128545631774,0,0,0,0,0.207125772535502,0.234526059981096,0,0.710234206755631,0.787056926989615,0.308534225774757,0,0.268273401399619,0.700592054203017,0.822799249567402,0.820837320395476,0.729619285912702,0.146199987425332,0.878200461164203,0.402619256281115,0.210289948564127,0.205809224758569,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0.19496408711912,0.898819408654221,0,0,0,0.571242563048644,0,0.203651327845314,0.193952487167626,0.49095073923223,0.379419222745544,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0.648540907100142,0,0,0,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0,0.162964976442026,0.848725428875941,0.234690248288502,0,0,0.390267295715598,0.472905432318573,0,0.797273843287435,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,0,0,0.35163505977661,0.491804836130026,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0,0,0,1.29214146584111,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0.322928853391811,0.542816324353403,1.19372344003136,0.164140899745061,0.582961673259701,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,1.31857919903284,1.50363650493128,3.66045077130436,0,0,0.138199973804424,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.269728692769641,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0.645799117388655,0.675824501963113,0.234714477291508,1.0416350787516,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,0,0.682934423016537,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.655490552289177,0.256100609619477,1.03383844120104,0.476293691283074,1.39061191133827,0.578727661391115,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,1.43061713968393,0.290692833264657,0.658765662907314,1.01537529470012,0.914639864363863,0,0.543216455383447,0.561142271657738,0.593175090620871,1.0835493061312,0.409231043169689,0.309873682371932,0,0.999242311751784,1.40358965067245,0.859484216193193,0.765153328275374,0.882365676478062,0 | |phase1_expression=3.04282809499109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,1.39912375625629,3.62781490161973,2.33094537129756,2.12194825899015,0.595303031057488,0.397163804803541,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0,0,0,0,0,0,0,1.8456086666351,0,0,0.514518872071894,0.573066879877513,0,1.01158230429799,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0,0.135005938331691,0,1.71390590642282,1.54607978666129,1.46988959057945,2.49198224647415,1.83843757322004,0,0,0.153606533256243,0.395658863190582,0.640413505216868,0,0,1.12552522006336,0.61119299110724,5.59794312399969,3.70166370077668,3.54158947068071,0.075726193333184,0.302286240427142,0.579728977403356,0,0,0,0,0,0.280888840263504,0.852151612890289,1.29893002301434,0.70667914902068,1.97180787687353,5.13305909657271,12.7402619853323,7.11066703153331,0,0,0,0.34255163915718,1.29468941823586,0,0.173485326766136,0,0,0.301445281105245,0.470354828542819,0.376999773989026,0,0.578397427679647,0,1.29413479957927,2.20841518460394,1.45462575940567,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,1.88481528169297,0,0,0,0,0.509196819251581,1.11966273549084,0,0,0.780722657776222,0,0.540186389416048,0.30140963567143,0.476255494059295,0.768682321709099,0.562210347358373,0,0.862271971731369,0.756424320671277,1.05570674498369,1.53437012699302,0.278047249225598,0,0.823128545631774,0,0,0,0,0.207125772535502,0.234526059981096,0,0.710234206755631,0.787056926989615,0.308534225774757,0,0.268273401399619,0.700592054203017,0.822799249567402,0.820837320395476,0.729619285912702,0.146199987425332,0.878200461164203,0.402619256281115,0.210289948564127,0.205809224758569,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0.19496408711912,0.898819408654221,0,0,0,0.571242563048644,0,0.203651327845314,0.193952487167626,0.49095073923223,0.379419222745544,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0.648540907100142,0,0,0,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0,0.162964976442026,0.848725428875941,0.234690248288502,0,0,0.390267295715598,0.472905432318573,0,0.797273843287435,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,0,0,0.35163505977661,0.491804836130026,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0,0,0,1.29214146584111,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0.322928853391811,0.542816324353403,1.19372344003136,0.164140899745061,0.582961673259701,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,1.31857919903284,1.50363650493128,3.66045077130436,0,0,0.138199973804424,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.269728692769641,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0.645799117388655,0.675824501963113,0.234714477291508,1.0416350787516,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,0,0.682934423016537,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.655490552289177,0.256100609619477,1.03383844120104,0.476293691283074,1.39061191133827,0.578727661391115,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,1.43061713968393,0.290692833264657,0.658765662907314,1.01537529470012,0.914639864363863,0,0.543216455383447,0.561142271657738,0.593175090620871,1.0835493061312,0.409231043169689,0.309873682371932,0,0.999242311751784,1.40358965067245,0.859484216193193,0.765153328275374,0.882365676478062,0 | ||
|short_description=p10@Ebf1 | |short_description=p10@Ebf1 | ||
}} | }} |
Latest revision as of 13:00, 1 October 2015
Short description: | p10@Ebf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Ebf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:243 |
Association with transcript: | 0bp_to_NM_007897, uc007inj.1, uc007ink.1, uc007inl.1, uc007inm.1, uc007inn.1_5end |
EntrezGene: | Ebf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.59e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.59e-11 | 23 |
neuron | 2.11e-08 | 33 |
neuronal stem cell | 2.11e-08 | 33 |
neuroblast | 2.11e-08 | 33 |
electrically signaling cell | 2.11e-08 | 33 |
epithelial cell of thymus | 3.09e-08 | 3 |
neuron of the ventral spinal cord | 4.94e-08 | 3 |
hippocampal neuron | 3.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 1.14e-11 | 5 |
gray matter of spinal cord | 1.14e-11 | 5 |
spinal cord | 1.22e-09 | 6 |
dorsal region element | 1.22e-09 | 6 |
dorsum | 1.22e-09 | 6 |
subdivision of skeletal system | 5.35e-09 | 6 |
developing mesenchymal condensation | 5.35e-09 | 6 |
pre-cartilage condensation | 5.35e-09 | 6 |
cartilaginous condensation | 5.35e-09 | 6 |
ventral horn of spinal cord | 4.94e-08 | 3 |