FFCP PHASE1:Mm9::chr11:69482493..69482498,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=64 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000158917_5end | |association_with_transcript=0bp_to_ENSMUST00000158917_5end | ||
|cluster_id=chr11:69482493..69482498,- | |||
|description=CAGE_peak_1_at_ENSMUST00000158917_5end | |description=CAGE_peak_1_at_ENSMUST00000158917_5end | ||
|id=chr11:69482493..69482498,- | |id=chr11:69482493..69482498,- | ||
|ontology_enrichment_celltype=CL:0000034!9.18e-15!97;CL:0000548!8.88e-14!115;CL:0000004!8.88e-14!115;CL:0000255!8.88e-14!115;CL:0000144!1.10e-13!121;CL:0000012!1.10e-13!121;CL:0000723!1.13e-13!91;CL:0000048!1.13e-13!91;CL:0002371!7.84e-13!118;CL:0002319!2.01e-11!43;CL:0000055!2.28e-11!50;CL:0000221!6.82e-11!44;CL:0000133!6.82e-11!44;CL:0002321!2.04e-10!70;CL:0000220!2.04e-10!70;CL:0000117!3.28e-10!23;CL:0000337!3.28e-10!23;CL:0000393!6.24e-10!39;CL:0000211!6.24e-10!39;CL:0000540!1.46e-09!33;CL:0000047!1.46e-09!33;CL:0000031!1.46e-09!33;CL:0000404!1.46e-09!33;CL:0000219!2.29e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,2.14e-15,3;CL:0002540,2.14e-15,3;CL:0002614,4.13e-15,3;CL:0000117,3.71e-12,23;CL:0000337,3.71e-12,23;CL:0000723,6.32e-11,91;CL:0000048,6.32e-11,91;CL:0000034,4.29e-10,97;CL:0000540,3.60e-08,33;CL:0000047,3.60e-08,33;CL:0000031,3.60e-08,33;CL:0000404,3.60e-08,33;CL:0002319,1.30e-07,43;CL:0000221,2.07e-07,44;CL:0000133,2.07e-07,44;CL:0002610,3.37e-07,3;CL:0000120,7.29e-07,3;CL:0000393,9.32e-07,39;CL:0000211,9.32e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.59e-10!73;UBERON:0005743!9.59e-10!73;UBERON:0000073!1.61e-09!75;UBERON:0001016!1.61e-09!75;UBERON:0002020!2.48e-09!34;UBERON:0002791!1.03e-07!29;UBERON:0003528!1.03e-07!29;UBERON:0001893!1.03e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.13e-15,3;UBERON:0009663,4.13e-15,3;UBERON:0009661,4.13e-15,3;UBERON:0000125,4.13e-15,3;UBERON:0002308,4.13e-15,3;UBERON:0002950,1.82e-11,4;UBERON:0001891,1.82e-11,4;UBERON:0009616,1.82e-11,4;UBERON:0010286,1.82e-11,4;UBERON:0002371,3.00e-07,16;UBERON:0004684,3.37e-07,3;UBERON:0002275,3.37e-07,3 | |||
|phase1_expression=0,0,0,0.90739263392049,0,0.16787927191189,0.233612640595526,0.129123323441576,0.281577444303333,1.40438715793196,0.513653904676515,0.159544317990673,0.171200729931206,0.174840804837995,0.999329285446988,1.01237633694913,0,0,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,15.8481681015439,0,0,0,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0.65407546914134,0.659058548203415,0.58328969722285,0.55994568650145,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0.606949382578793,1.05798195854407,1.26766280701236,0.338844532069132,0.889294796111139,1.7997994345628,2.96659908770092,2.1314403448383,0.599200221036809,1.15265491596466,0.311068836925433,0.810035629990144,0,0,0.662605622854841,0.122490799214954,0.479227355091182,1.83843757322004,0,1.53224805702225,1.68967186581868,0.659431438650969,0.548925861614458,0,1.11673199600552,4.50210088025344,2.44477196442896,0.294628585473668,0.711858403995515,0.745597783301202,0,0.0755715601067855,0,0,0.679971333707751,1.61910957491345,0.649776417447669,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,0,1.01104889002957,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,0,0.127070227073065,0.149790639404823,0.457500602818626,0,0.347648640384553,0,0,0,0,0,0.252722758433675,0,0,0,0.180062129805349,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0.284163499395593,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0.219550115291051,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0,0,0.54390568381871,0,0.275936746304732,0.160550589987792,0,0,0.252470927204373,0.315508219416257,0,0.861693590931196,0,0,0.566153061577665,0.404810701674894,0.584511715822624,0,0,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.158167996790568,0.406638934253697,0,0,0,0,0.247960367176008,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0,0.0962118416403295,0,0,0.443971906748129,0.0897138566094757,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0.515559547031063,0.685082519770642,0,0.675022500231806,0,1.81256963593682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.90739263392049,0,0.16787927191189,0.233612640595526,0.129123323441576,0.281577444303333,1.40438715793196,0.513653904676515,0.159544317990673,0.171200729931206,0.174840804837995,0.999329285446988,1.01237633694913,0,0,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,15.8481681015439,0,0,0,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0.65407546914134,0.659058548203415,0.58328969722285,0.55994568650145,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0.606949382578793,1.05798195854407,1.26766280701236,0.338844532069132,0.889294796111139,1.7997994345628,2.96659908770092,2.1314403448383,0.599200221036809,1.15265491596466,0.311068836925433,0.810035629990144,0,0,0.662605622854841,0.122490799214954,0.479227355091182,1.83843757322004,0,1.53224805702225,1.68967186581868,0.659431438650969,0.548925861614458,0,1.11673199600552,4.50210088025344,2.44477196442896,0.294628585473668,0.711858403995515,0.745597783301202,0,0.0755715601067855,0,0,0.679971333707751,1.61910957491345,0.649776417447669,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,0,1.01104889002957,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,0,0.127070227073065,0.149790639404823,0.457500602818626,0,0.347648640384553,0,0,0,0,0,0.252722758433675,0,0,0,0.180062129805349,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0.284163499395593,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0.219550115291051,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0,0,0.54390568381871,0,0.275936746304732,0.160550589987792,0,0,0.252470927204373,0.315508219416257,0,0.861693590931196,0,0,0.566153061577665,0.404810701674894,0.584511715822624,0,0,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.158167996790568,0.406638934253697,0,0,0,0,0.247960367176008,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0,0.0962118416403295,0,0,0.443971906748129,0.0897138566094757,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,0.515559547031063,0.685082519770642,0,0.675022500231806,0,1.81256963593682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000158917 | |short_description=p1@ENSMUST00000158917 | ||
}} | }} |
Latest revision as of 10:26, 6 August 2015
Short description: | p1@ENSMUST00000158917 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000158917_5end |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | 0bp_to_ENSMUST00000158917_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 2.14e-15 | 3 |
mesenchymal stem cell of the bone marrow | 2.14e-15 | 3 |
neuron of the substantia nigra | 4.13e-15 | 3 |
CNS neuron (sensu Vertebrata) | 3.71e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.71e-12 | 23 |
somatic stem cell | 6.32e-11 | 91 |
multi fate stem cell | 6.32e-11 | 91 |
stem cell | 4.29e-10 | 97 |
neuron | 3.60e-08 | 33 |
neuronal stem cell | 3.60e-08 | 33 |
neuroblast | 3.60e-08 | 33 |
electrically signaling cell | 3.60e-08 | 33 |
neural cell | 1.30e-07 | 43 |
ectodermal cell | 2.07e-07 | 44 |
neurectodermal cell | 2.07e-07 | 44 |
raphe nuclei neuron | 3.37e-07 | 3 |
granule cell | 7.29e-07 | 3 |
electrically responsive cell | 9.32e-07 | 39 |
electrically active cell | 9.32e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 4.13e-15 | 3 |
telencephalic nucleus | 4.13e-15 | 3 |
midbrain nucleus | 4.13e-15 | 3 |
neural nucleus | 4.13e-15 | 3 |
nucleus of brain | 4.13e-15 | 3 |
regional part of midbrain | 1.82e-11 | 4 |
midbrain | 1.82e-11 | 4 |
presumptive midbrain | 1.82e-11 | 4 |
midbrain neural tube | 1.82e-11 | 4 |
bone marrow | 3.00e-07 | 16 |
raphe nuclei | 3.37e-07 | 3 |
reticular formation | 3.37e-07 | 3 |