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FFCP PHASE1:Mm9::chr11:98798983..98799049,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19401
|EntrezGene=19401
|HGNC=
|HGNC=
|MCL_coexpression_id=925
|TSSclassifier=NA
|UniProt=P11416,Q3U3R3
|UniProt=P11416,Q3U3R3
|association_with_transcript=0bp_to_ENSMUST00000068133,ENSMUST00000107475,NM_001177302,NM_009024,uc007lhx.1,uc007lhy.1_5end
|association_with_transcript=0bp_to_ENSMUST00000068133,ENSMUST00000107475,NM_001177302,NM_009024,uc007lhx.1,uc007lhy.1_5end
|cluster_id=chr11:98798983..98799049,+
|description=CAGE_peak_1_at_Rara_5end
|description=CAGE_peak_1_at_Rara_5end
|id=chr11:98798983..98799049,+
|id=chr11:98798983..98799049,+
|ontology_enrichment_celltype=CL:0000838!7.56e-08!12;CL:0000738!1.15e-07!17;CL:0002087!1.15e-07!17;CL:0000542!1.62e-07!13;CL:0000051!1.62e-07!13;CL:0000084!3.52e-07!11;CL:0000827!3.52e-07!11;CL:0000791!3.93e-07!9;CL:0000789!3.93e-07!9;CL:0002420!3.93e-07!9;CL:0002419!3.93e-07!9;CL:0000790!3.93e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000838,7.56e-08,12;CL:0000738,1.15e-07,17;CL:0002087,1.15e-07,17;CL:0000542,1.62e-07,13;CL:0000051,1.62e-07,13;CL:0000084,3.52e-07,11;CL:0000827,3.52e-07,11;CL:0000791,3.93e-07,9;CL:0000789,3.93e-07,9;CL:0002420,3.93e-07,9;CL:0002419,3.93e-07,9;CL:0000790,3.93e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=22.7411362888807,10.8182376368202,14.1049764210756,6.95667686005709,10.5188103288733,14.1018588405987,9.81173090501208,61.3335786347487,346.058679048797,348.053950640804,69.856931036006,77.4587663844716,59.5778540160596,70.1985831424549,13.6575002344422,12.755941845559,5.59649502502517,62.6192398236102,55.9426889111414,56.01943403734,17.5189177711204,32.0709772378859,27.4259778595882,13.2793710918528,11.4704640533585,13.7815671387605,12.0613358924541,11.8509177977239,6.46079626151671,7.56090389279792,5.32153225572731,5.71527606113668,7.38077745101484,0,4.91047753577167,5.31950865147176,6.12508068787107,23.0192396905299,29.6907430919044,16.7527598071615,43.5291301142951,44.397956522299,22.3334762394331,32.1036885837722,30.3117024346349,23.6775310288569,71.9800036800196,5.01457859675027,14.0599156950062,13.2212331370513,20.857976822179,15.8127820801469,103.689650543681,66.7333170650437,68.8992288242051,16.4646039063006,24.0688089548556,15.4701627683233,2.22548106945558,3.70293685490423,4.43681982454325,25.4133399051849,38.239676232779,44.5450360054292,64.2763135668533,44.7602472416043,31.1584114939141,20.7477884873639,2.7996195323289,2.56511282830212,1.89292465216244,4.28476476605705,7.28866185140325,2.32732518508413,2.68367318851062,1.83843757322004,3.30347642998166,3.19218345212969,2.4577045320999,1.97829431595291,2.47016637726506,3.64639359389732,3.90856198601933,6.75315132038016,3.51435969886663,5.30331453852602,5.26775218956681,7.08317894136142,21.809143679957,10.2777321745228,36.5229255764114,9.46466264679525,20.3991400112325,18.8896117073236,12.3457519315057,18.3691023709908,20.364440919104,42.6075806445144,48.0604108515307,37.8073344726064,26.6194063377926,96.2448580607384,193.651982177051,191.988009851399,5.19578498426914,3.54703811665138,9.0994400102661,14.7297204837587,54.8948313332004,23.4538579722423,21.685665845767,17.6589977421042,17.7573932887165,13.1128697280782,26.4574591055336,18.3473223341326,27.9330313539842,21.9791022518266,23.8844849026466,38.9858108373256,23.1883594383413,15.0311328471919,13.0474232852686,3.51336956413857,3.56059401582874,16.6047085885584,41.5758482035543,26.3957201637099,27.447169047782,2.69623150928681,4.11750542536764,2.1361239859187,3.82413504423008,4.60287823194595,3.74018480207208,2.92034273521964,28.8205399696395,22.2688477392066,13.3943061969848,9.46988351489133,19.1277051155174,9.88579049063934,20.3470206680045,22.9071323110287,20.0027307504904,17.4234659587396,13.493048336601,13.4525752784288,35.9998548197847,37.8212160335639,36.0699804536095,37.2632745126877,38.0924731439069,33.432207986128,41.1564272815887,26.4715574868596,18.2575428701441,12.610047448621,17.6181369625267,23.8194638415827,20.1692411583743,22.5077576826269,27.6991340634696,27.3502282128891,24.6827380619805,28.8342091490506,31.9245347665547,33.044591889909,34.0638889320905,25.6101243963389,26.428431911949,21.3451981640985,23.0527621055603,21.7414398391802,4.41608891984667,3.08713837137853,6.93879444265976,9.78467096655114,23.8882840599462,28.1006372951131,25.5157573417745,18.9582513145942,22.6825604721768,14.8375988367796,9.49058123089023,22.3990578424655,22.1174983744237,21.8852119245266,22.8107981929371,14.3811105384675,12.9682829924817,11.3510525754989,25.7948345296191,18.6225075553858,38.3206301288473,23.4199027022111,24.2440608959532,27.4932413970049,23.0813360503539,28.0459281161244,25.5907926381441,22.2114895059241,12.1545577105731,7.50802975722423,8.84515478009414,6.52100125916076,6.08580364165509,9.16473207059184,9.67578236769395,14.9601991474422,16.8620635846037,10.7078951143352,63.258010872036,23.8170206507842,19.6583734062173,18.185679212192,10.225652570749,20.2626278972614,42.1237273579859,21.7915123536057,24.93364139563,25.8012530378286,25.3465468151582,26.8010011906905,31.8978478787258,40.78293240228,37.8324345854858,37.427532550643,36.1962324852496,34.5751594050207,26.420802225482,32.5460381808401,48.2532108605671,27.1952841909355,12.7858710984949,9.65778612066564,4.0137647496948,4.33683240391152,51.6395077936528,47.9694761688309,22.7165917979705,16.3984272604588,18.0955654095551,25.8086301788756,21.1658740378274,21.7968928707401,29.5511812222673,21.0424217696145,28.8560077900962,5.46246237917072,23.4201140593643,27.2440373610901,33.7176005861903,29.5296520120838,15.9294166007955,16.7518638946937,14.2092071773433,12.8251454234011,22.147641966058,19.6758494684114,13.6966995379157,18.9037539328303,15.6858846489277,23.3867200872504,14.7586052004998,12.3762651897824,12.9367050186439,30.9705081733854,44.240669853702,46.2967995668239,39.546872102227,38.8844022372514,25.5050981933287,49.9322516547943,13.3762873596315,3.1774810629573,8.82113592219848,28.0306630000516,63.9399129715786,39.5049658279421,30.5593200648029,24.2928531622691,24.4843902769075,4.45020724825223,24.9471485964865,39.4198917809755,27.593984578087,9.98352822124862,18.0436380591753,14.870581258424,83.1194522669953,79.6323763721614,82.3671843874366,31.5041303944987,29.5774153998362,30.4979200690273,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|phase1_expression=22.7411362888807,10.8182376368202,14.1049764210756,6.95667686005709,10.5188103288733,14.1018588405987,9.81173090501208,61.3335786347487,346.058679048797,348.053950640804,69.856931036006,77.4587663844716,59.5778540160596,70.1985831424549,13.6575002344422,12.755941845559,5.59649502502517,62.6192398236102,55.9426889111414,56.01943403734,17.5189177711204,32.0709772378859,27.4259778595882,13.2793710918528,11.4704640533585,13.7815671387605,12.0613358924541,11.8509177977239,6.46079626151671,7.56090389279792,5.32153225572731,5.71527606113668,7.38077745101484,0,4.91047753577167,5.31950865147176,6.12508068787107,23.0192396905299,29.6907430919044,16.7527598071615,43.5291301142951,44.397956522299,22.3334762394331,32.1036885837722,30.3117024346349,23.6775310288569,71.9800036800196,5.01457859675027,14.0599156950062,13.2212331370513,20.857976822179,15.8127820801469,103.689650543681,66.7333170650437,68.8992288242051,16.4646039063006,24.0688089548556,15.4701627683233,2.22548106945558,3.70293685490423,4.43681982454325,25.4133399051849,38.239676232779,44.5450360054292,64.2763135668533,44.7602472416043,31.1584114939141,20.7477884873639,2.7996195323289,2.56511282830212,1.89292465216244,4.28476476605705,7.28866185140325,2.32732518508413,2.68367318851062,1.83843757322004,3.30347642998166,3.19218345212969,2.4577045320999,1.97829431595291,2.47016637726506,3.64639359389732,3.90856198601933,6.75315132038016,3.51435969886663,5.30331453852602,5.26775218956681,7.08317894136142,21.809143679957,10.2777321745228,36.5229255764114,9.46466264679525,20.3991400112325,18.8896117073236,12.3457519315057,18.3691023709908,20.364440919104,42.6075806445144,48.0604108515307,37.8073344726064,26.6194063377926,96.2448580607384,193.651982177051,191.988009851399,5.19578498426914,3.54703811665138,9.0994400102661,14.7297204837587,54.8948313332004,23.4538579722423,21.685665845767,17.6589977421042,17.7573932887165,13.1128697280782,26.4574591055336,18.3473223341326,27.9330313539842,21.9791022518266,23.8844849026466,38.9858108373256,23.1883594383413,15.0311328471919,13.0474232852686,3.51336956413857,3.56059401582874,16.6047085885584,41.5758482035543,26.3957201637099,27.447169047782,2.69623150928681,4.11750542536764,2.1361239859187,3.82413504423008,4.60287823194595,3.74018480207208,2.92034273521964,28.8205399696395,22.2688477392066,13.3943061969848,9.46988351489133,19.1277051155174,9.88579049063934,20.3470206680045,22.9071323110287,20.0027307504904,17.4234659587396,13.493048336601,13.4525752784288,35.9998548197847,37.8212160335639,36.0699804536095,37.2632745126877,38.0924731439069,33.432207986128,41.1564272815887,26.4715574868596,18.2575428701441,12.610047448621,17.6181369625267,23.8194638415827,20.1692411583743,22.5077576826269,27.6991340634696,27.3502282128891,24.6827380619805,28.8342091490506,31.9245347665547,33.044591889909,34.0638889320905,25.6101243963389,26.428431911949,21.3451981640985,23.0527621055603,21.7414398391802,4.41608891984667,3.08713837137853,6.93879444265976,9.78467096655114,23.8882840599462,28.1006372951131,25.5157573417745,18.9582513145942,22.6825604721768,14.8375988367796,9.49058123089023,22.3990578424655,22.1174983744237,21.8852119245266,22.8107981929371,14.3811105384675,12.9682829924817,11.3510525754989,25.7948345296191,18.6225075553858,38.3206301288473,23.4199027022111,24.2440608959532,27.4932413970049,23.0813360503539,28.0459281161244,25.5907926381441,22.2114895059241,12.1545577105731,7.50802975722423,8.84515478009414,6.52100125916076,6.08580364165509,9.16473207059184,9.67578236769395,14.9601991474422,16.8620635846037,10.7078951143352,63.258010872036,23.8170206507842,19.6583734062173,18.185679212192,10.225652570749,20.2626278972614,42.1237273579859,21.7915123536057,24.93364139563,25.8012530378286,25.3465468151582,26.8010011906905,31.8978478787258,40.78293240228,37.8324345854858,37.427532550643,36.1962324852496,34.5751594050207,26.420802225482,32.5460381808401,48.2532108605671,27.1952841909355,12.7858710984949,9.65778612066564,4.0137647496948,4.33683240391152,51.6395077936528,47.9694761688309,22.7165917979705,16.3984272604588,18.0955654095551,25.8086301788756,21.1658740378274,21.7968928707401,29.5511812222673,21.0424217696145,28.8560077900962,5.46246237917072,23.4201140593643,27.2440373610901,33.7176005861903,29.5296520120838,15.9294166007955,16.7518638946937,14.2092071773433,12.8251454234011,22.147641966058,19.6758494684114,13.6966995379157,18.9037539328303,15.6858846489277,23.3867200872504,14.7586052004998,12.3762651897824,12.9367050186439,30.9705081733854,44.240669853702,46.2967995668239,39.546872102227,38.8844022372514,25.5050981933287,49.9322516547943,13.3762873596315,3.1774810629573,8.82113592219848,28.0306630000516,63.9399129715786,39.5049658279421,30.5593200648029,24.2928531622691,24.4843902769075,4.45020724825223,24.9471485964865,39.4198917809755,27.593984578087,9.98352822124862,18.0436380591753,14.870581258424,83.1194522669953,79.6323763721614,82.3671843874366,31.5041303944987,29.5774153998362,30.4979200690273,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|short_description=p1@Rara
|short_description=p1@Rara
}}
}}

Latest revision as of 03:33, 26 September 2015

Short description:p1@Rara
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rara_5end
Coexpression cluster:MCL_coexpression_mm9:925
Association with transcript: 0bp_to_ENSMUST00000068133, ENSMUST00000107475, NM_001177302, NM_009024, uc007lhx.1, uc007lhy.1_5end
EntrezGene:Rara
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rara

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G722.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.10
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.81
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E961.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7346.06
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2348.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E669.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F177.46
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E459.58
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E870.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.76
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A262.62
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A455.94
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A656.02
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H232.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I927.43
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.47
GP2+ M cell, pool1.CNhs13228.11845-124H913.78
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I211.85
Ileum epithelium, pool1.CNhs13199.10252-104B96.46
Ileum epithelium, pool2.CNhs13232.10253-104C17.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H129.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.75
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G943.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H244.40
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H422.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D832.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D930.31
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B323.68
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B771.98
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.06
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.86
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2103.69
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I966.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A168.90
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E124.07
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.47
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C625.41
Mouse Meningeal cells, donor3.CNhs12109.11639-122D138.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C744.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E764.28
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D244.76
Mouse Microglia, donor1.CNhs12629.11718-123C831.16
Mouse Microglia, donor2.CNhs12634.11736-123E820.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D921.81
Mouse Schwann, donor2.CNhs12573.11746-123F910.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G336.52
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C420.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.89
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F618.37
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I742.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E348.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I837.81
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G626.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H196.24
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8193.65
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6191.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.73
accessory axillary lymph node, adult.CNhs10475.1063-29H954.89
adrenal gland, adult.CNhs10508.49-24D723.45
adrenal gland, embryo E14.CNhs11038.406-44C521.69
adrenal gland, embryo E16.CNhs11004.1254-43D617.66
adrenal gland, embryo E17.CNhs11043.1263-45I117.76
adrenal gland, embryo E18.CNhs11026.1262-18F513.11
adrenal gland, neonate N00.CNhs11191.1311-23C126.46
adrenal gland, neonate N25.CNhs11223.1377-27I318.35
amnion, adult pregnant day17.5.CNhs10488.583-22A827.93
aorta, adult.CNhs10498.46-23H121.98
bone (os femoris), adult.CNhs10483.56-12G223.88
bone (os femoris), neonate N02.CNhs11227.1985-43F538.99
bone (os femoris), neonate N16.CNhs11225.1525-43A623.19
bone (os femoris), neonate N20.CNhs11195.1350-25C315.03
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H716.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C741.58
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D126.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D427.45
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B128.82
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.27
epididymis, adult.CNhs10490.58-23B213.39
eyeball, adult.CNhs10484.31-12G49.47
eyeball, embryo E12.CNhs11016.345-16C619.13
eyeball, embryo E14.CNhs10521.399-16E29.89
eyeball, embryo E15.CNhs10593.426-16C920.35
eyeball, embryo E17.CNhs11023.1261-18D422.91
eyeball, neonate N00.CNhs11207.633-15C620.00
eyeball, neonate N01.CNhs11140.1532-43E717.42
eyeball, neonate N02.CNhs11205.1551-44G813.49
eyeball, neonate N16.CNhs11188.777-19A213.45
forelimb, embryo E11.CNhs10596.335-25E236.00
forelimb, embryo E12.CNhs10600.359-14H237.82
forelimb, embryo E13.CNhs10589.384-1E236.07
forelimb, embryo E14.CNhs10577.413-26A837.26
forelimb, embryo E15.CNhs11007.437-20E738.09
forelimb, embryo E17.CNhs10598.1517-43C433.43
forelimb, embryo E18.CNhs11008.1520-43B541.16
gonad, embryo E13.CNhs11044.1564-45I626.47
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.26
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.61
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.62
heart, embryo E11.CNhs10586.331-24E923.82
heart, embryo E12.CNhs11015.353-12F520.17
heart, embryo E13.CNhs11013.376-3I922.51
heart, embryo E14.CNhs10597.403-26D427.70
heart, embryo E15.CNhs11017.431-16C827.35
heart, embryo E16.CNhs11021.457-17C624.68
heart, embryo E17.CNhs11025.479-18E528.83
heart, embryo E18.CNhs11030.1283-20G331.92
heart, neonate N00.CNhs11213.639-21E333.04
heart, neonate N03.CNhs11221.1349-25I234.06
heart, neonate N10.CNhs11118.749-24G125.61
heart, neonate N16.CNhs11209.782-15G126.43
heart, neonate N20.CNhs11127.821-26I621.35
heart, neonate N25.CNhs11196.1351-25D323.05
heart, neonate N30.CNhs11202.1390-42D221.74
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A39.78
intestine, embryo E12.CNhs11019.1251-16I523.89
intestine, embryo E13.CNhs11010.381-16D528.10
intestine, embryo E15.CNhs10602.976-16D825.52
intestine, embryo E16.CNhs10585.463-22H418.96
intestine, embryo E17.CNhs10582.482-18D322.68
intestine, embryo E18.CNhs10526.1289-20F714.84
intestine, neonate N00.CNhs11126.644-26D19.49
intestine, neonate N01.CNhs11192.1322-23E922.40
intestine, neonate N06.CNhs11102.688-20B822.12
intestine, neonate N07.CNhs11095.720-20F221.89
intestine, neonate N10.CNhs11098.755-23A522.81
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E312.97
intestine, neonate N30.CNhs11131.1384-42G111.35
kidney, embryo E14.CNhs10606.411-4I925.79
kidney, embryo E15.CNhs10997.434-16F818.62
kidney, embryo E16.CNhs10584.464-22A538.32
kidney, embryo E17.CNhs11028.483-18I223.42
kidney, embryo E18.CNhs11001.1288-20C724.24
kidney, neonate N00.CNhs11214.646-21G727.49
kidney, neonate N10.CNhs11206.758-6D523.08
kidney, neonate N20.CNhs11113.832-19I128.05
kidney, neonate N25.CNhs11122.1353-25F325.59
kidney, neonate N30.CNhs11203.1385-42H122.21
liver, adult pregnant day01.CNhs10466.508-5B212.15
liver, embryo E12.CNhs10601.355-15F87.51
liver, embryo E13.CNhs10524.378-3H68.85
liver, embryo E14.CNhs10594.409-16E16.52
liver, embryo E15.CNhs10520.433-16D76.09
liver, embryo E16.CNhs10523.462-17F59.16
liver, embryo E17.CNhs10510.481-18A39.68
liver, embryo E18.CNhs10579.499-43G414.96
liver, neonate N00.CNhs11117.641-24F416.86
liver, neonate N03.CNhs11123.1345-25G210.71
liver, neonate N06.CNhs11101.684-20A863.26
liver, neonate N07.CNhs11103.716-20H223.82
liver, neonate N10.CNhs11115.751-24B919.66
liver, neonate N20.CNhs11220.823-25A318.19
liver, neonate N25.CNhs11198.1368-26H110.23
liver, neonate N30.CNhs11106.1382-42D120.26
lung, adult.CNhs10474.28-22B142.12
lung, embryo E12.CNhs10522.354-16G221.79
lung, embryo E14.CNhs10604.404-26F824.93
lung, embryo E15.CNhs11020.432-17C525.80
lung, embryo E16.CNhs10998.458-17B625.35
lung, embryo E17.CNhs10605.480-44A626.80
lung, embryo E18.CNhs10583.1287-20I631.90
lung, neonate N00.CNhs11224.640-42C640.78
lung, neonate N06.CNhs11212.683-20E537.83
lung, neonate N07.CNhs11111.715-19A337.43
lung, neonate N10.CNhs11219.750-23E636.20
lung, neonate N20.CNhs11109.822-18A434.58
lung, neonate N25.CNhs11119.1359-25C726.42
lung, neonate N30.CNhs11133.1394-42H232.55
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A148.25
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A127.20
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H29.66
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C751.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C247.97
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E122.72
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.10
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D725.81
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D821.17
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D921.80
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D429.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.86
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I723.42
ovary, embryo E18.CNhs11040.505-44H727.24
ovary, neonate N00.CNhs11217.1299-22I433.72
oviduct, adult pregnant day01.CNhs10500.988-6G629.53
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F416.75
pancreas, embryo E15.CNhs11042.1556-45F214.21
pancreas, embryo E16.CNhs11003.460-26E512.83
pancreas, embryo E17.CNhs10599.1558-45G322.15
pancreas, embryo E18.CNhs10580.1535-43I719.68
pancreas, neonate N00.CNhs11105.645-26G913.70
pancreas, neonate N01.CNhs11138.1531-43D718.90
pancreas, neonate N02.CNhs11139.1539-43D815.69
pancreas, neonate N16.CNhs11136.787-43B623.39
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G812.94
pituitary gland, embryo E12.CNhs11018.346-16E630.97
pituitary gland, embryo E13.CNhs11009.370-44C744.24
pituitary gland, embryo E14.CNhs11037.398-44A546.30
pituitary gland, embryo E15.CNhs10592.427-16B939.55
pituitary gland, embryo E16.CNhs11036.449-43F638.88
pituitary gland, embryo E17.CNhs11039.1265-44F525.51
pituitary gland, neonate N00.CNhs11190.1308-22E949.93
placenta, adult pregnant day10.CNhs10472.539-13I713.38
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C328.03
skin, neonate N00.CNhs11124.650-25G463.94
skin, neonate N03.CNhs11215.662-22H339.50
skin, neonate N06.CNhs11097.693-20I530.56
skin, neonate N10.CNhs11108.762-6C424.29
small intestine, neonate N16.CNhs11114.790-21I124.48
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G224.95
spleen, embryo E16.CNhs11035.461-43C139.42
spleen, embryo E18.CNhs11011.1271-21F227.59
spleen, neonate N10.CNhs11116.752-24D19.98
spleen, neonate N20.CNhs11112.824-19H118.04
spleen, neonate N25.CNhs11099.1354-25G314.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C683.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C979.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D382.37
stomach, adult.CNhs10503.33-1H631.50
stomach, embryo E12.CNhs10588.356-43E329.58
stomach, embryo E15.CNhs10603.1252-16G830.50
stomach, embryo E16.CNhs11022.459-17D425.27
stomach, embryo E17.CNhs11006.1035-18D526.14
stomach, embryo E18.CNhs10999.1286-20C627.51
stomach, neonate N03.CNhs11193.1340-24B821.17
stomach, neonate N07.CNhs11210.718-18A927.36
stomach, neonate N25.CNhs11104.1355-25E424.61
stomach, neonate N30.CNhs11134.1386-42I19.85
submandibular gland, adult.CNhs10469.59-29C118.64
testis, adult.CNhs10504.57-7G511.84
testis, embryo E13.CNhs11031.389-23F532.15
testis, embryo E15.CNhs11034.443-27C529.95
testis, embryo E16.CNhs11033.470-26G531.50
testis, embryo E17.CNhs11029.486-18I531.90
testis, embryo E18.CNhs11027.503-18G534.47
testis, neonate N00.CNhs11189.1300-22B755.74
testis, neonate N07.CNhs11222.726-26I448.96
testis, neonate N10.CNhs11204.763-44D947.61
testis, neonate N20.CNhs11110.839-18H320.78
testis, neonate N30.CNhs11130.1391-42E216.42
thymus, adult.CNhs10471.38-12B517.06
thymus, embryo E14.CNhs11041.402-44I420.88
thymus, embryo E15.CNhs11005.430-45I220.44
thymus, embryo E16.CNhs11002.456-26C515.07
thymus, embryo E17.CNhs10581.478-18C115.22
thymus, embryo E18.CNhs10595.1273-19G412.91
thymus, neonate N02.CNhs11181.1541-43F814.18
thymus, neonate N03.CNhs11137.2104-43C712.85
thymus, neonate N06.CNhs11197.681-26C412.42
thymus, neonate N07.CNhs11211.713-19D311.89
thymus, neonate N10.CNhs11194.748-24E410.89
thymus, neonate N20.CNhs11186.820-7A218.22
thymus, neonate N25.CNhs11125.1362-25G716.45
thymus, neonate N30.CNhs11132.1393-42G216.01
tongue, adult.CNhs10499.32-1B435.60
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H326.86
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.39
urinary bladder, adult.CNhs10481.879-12E421.83
uterus, adult pregnant day19.CNhs10497.590-15F519.14
uterus, adult.CNhs10509.92-27E538.46
vagina, adult.CNhs10502.89-27D532.16
vesicular gland, adult.CNhs10491.51-27F817.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I829.06
whole body, embryo E12.CNhs10587.857-27C932.32
whole body, embryo E13.CNhs10512.372-23H221.51
whole body, embryo E14.5.CNhs10578.420-27D227.47
whole body, embryo E14.CNhs10519.395-14B124.52
whole body, embryo E16.CNhs10514.453-14F226.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G529.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G531.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.67
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G527.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G531.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G531.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G536.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G533.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G529.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G524.73
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.58
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G537.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.62
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G532.90
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G528.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G530.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G530.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G526.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.74
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G532.70
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G530.06
whole body, embryo E17.5.CNhs10513.490-9F931.25
whole body, embryo E17.CNhs10517.475-3I538.22
whole body, embryo E18.CNhs10516.493-3B325.73
whole body, neonate N00.CNhs10525.657-19C241.68
whole body, neonate N01.CNhs10576.659-23C647.82
whole body, neonate N06.CNhs10515.692-21D127.13
whole body, neonate N10.CNhs10518.761-6B422.95





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell7.56e-0812
leukocyte1.15e-0717
nongranular leukocyte1.15e-0717
lymphocyte1.62e-0713
common lymphoid progenitor1.62e-0713
T cell3.52e-0711
pro-T cell3.52e-0711
mature alpha-beta T cell3.93e-079
alpha-beta T cell3.93e-079
immature T cell3.93e-079
mature T cell3.93e-079
immature alpha-beta T cell3.93e-079
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