FFCP PHASE1:Mm9::chr12:36769063..36769103,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66109 | |EntrezGene=66109 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9D8C2,E0CY97 | |UniProt=Q9D8C2,E0CY97 | ||
|association_with_transcript=0bp_to_ENSMUST00000020896,ENSMUST00000128644,NM_025359,uc007njn.1_5end | |association_with_transcript=0bp_to_ENSMUST00000020896,ENSMUST00000128644,NM_025359,uc007njn.1_5end | ||
|cluster_id=chr12:36769063..36769103,- | |||
|description=CAGE_peak_1_at_Tspan13_5end | |description=CAGE_peak_1_at_Tspan13_5end | ||
|id=chr12:36769063..36769103,- | |id=chr12:36769063..36769103,- | ||
|ontology_enrichment_celltype=CL:0000117!3.64e-11!23;CL:0000337!3.64e-11!23;CL:0000540!1.12e-08!33;CL:0000047!1.12e-08!33;CL:0000031!1.12e-08!33;CL:0000404!1.12e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.64e-11,23;CL:0000337,3.64e-11,23;CL:0000540,1.12e-08,33;CL:0000047,1.12e-08,33;CL:0000031,1.12e-08,33;CL:0000404,1.12e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.23e-15!52;UBERON:0005068!9.23e-15!52;UBERON:0006241!9.23e-15!52;UBERON:0007135!9.23e-15!52;UBERON:0001017!9.38e-15!73;UBERON:0005743!9.38e-15!73;UBERON:0000073!1.92e-13!75;UBERON:0001016!1.92e-13!75;UBERON:0000955!4.48e-13!50;UBERON:0006238!4.48e-13!50;UBERON:0002020!5.45e-13!34;UBERON:0002616!6.17e-13!49;UBERON:0000033!4.89e-12!63;UBERON:0003080!7.55e-12!40;UBERON:0002780!1.22e-11!39;UBERON:0001890!1.22e-11!39;UBERON:0006240!1.22e-11!39;UBERON:0002791!2.61e-10!29;UBERON:0003528!2.61e-10!29;UBERON:0001893!2.61e-10!29;UBERON:0000160!6.08e-10!43;UBERON:0003056!1.10e-09!49;UBERON:0002346!2.92e-09!71;UBERON:0003075!2.92e-09!71;UBERON:0007284!2.92e-09!71;UBERON:0007811!4.64e-09!86;UBERON:0005409!5.85e-08!59;UBERON:0004121!9.00e-08!102;UBERON:0000924!9.00e-08!102;UBERON:0006601!9.00e-08!102;UBERON:0000064!3.43e-07!99;UBERON:0000956!5.70e-07!21;UBERON:0001869!5.70e-07!21;UBERON:0000203!5.70e-07!21;UBERON:0000153!6.33e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.28e-15,54;UBERON:0001049,9.22e-15,52;UBERON:0005068,9.22e-15,52;UBERON:0006241,9.22e-15,52;UBERON:0007135,9.22e-15,52;UBERON:0001017,9.37e-15,73;UBERON:0001016,1.92e-13,75;UBERON:0002020,5.45e-13,34;UBERON:0002346,8.40e-13,64;UBERON:0003075,8.40e-13,64;UBERON:0007284,8.40e-13,64;UBERON:0000955,4.50e-12,47;UBERON:0006238,4.50e-12,47;UBERON:0002616,6.15e-12,46;UBERON:0003080,7.55e-12,40;UBERON:0002780,1.21e-11,39;UBERON:0001890,1.21e-11,39;UBERON:0006240,1.21e-11,39;UBERON:0010371,1.49e-10,73;UBERON:0003528,2.61e-10,29;UBERON:0002791,2.61e-10,29;UBERON:0001893,2.61e-10,29;UBERON:0004121,2.81e-10,95;UBERON:0000924,2.81e-10,95;UBERON:0006601,2.81e-10,95;UBERON:0011216,2.99e-10,194;UBERON:0003056,1.10e-09,49;UBERON:0000956,5.70e-07,21;UBERON:0001869,5.70e-07,21;UBERON:0000203,5.70e-07,21 | |||
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| ||
|short_description=p1@Tspan13 | |short_description=p1@Tspan13 | ||
}} | }} |
Latest revision as of 14:10, 26 September 2015
Short description: | p1@Tspan13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tspan13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000020896, ENSMUST00000128644, NM_025359, uc007njn.1_5end |
EntrezGene: | Tspan13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.64e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.64e-11 | 23 |
neuron | 1.12e-08 | 33 |
neuronal stem cell | 1.12e-08 | 33 |
neuroblast | 1.12e-08 | 33 |
electrically signaling cell | 1.12e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.28e-15 | 54 |
neural tube | 9.22e-15 | 52 |
neural rod | 9.22e-15 | 52 |
future spinal cord | 9.22e-15 | 52 |
neural keel | 9.22e-15 | 52 |
central nervous system | 9.37e-15 | 73 |
nervous system | 1.92e-13 | 75 |
gray matter | 5.45e-13 | 34 |
neurectoderm | 8.40e-13 | 64 |
neural plate | 8.40e-13 | 64 |
presumptive neural plate | 8.40e-13 | 64 |
brain | 4.50e-12 | 47 |
future brain | 4.50e-12 | 47 |
regional part of brain | 6.15e-12 | 46 |
anterior neural tube | 7.55e-12 | 40 |
regional part of forebrain | 1.21e-11 | 39 |
forebrain | 1.21e-11 | 39 |
future forebrain | 1.21e-11 | 39 |
ecto-epithelium | 1.49e-10 | 73 |
brain grey matter | 2.61e-10 | 29 |
regional part of telencephalon | 2.61e-10 | 29 |
telencephalon | 2.61e-10 | 29 |
ectoderm-derived structure | 2.81e-10 | 95 |
ectoderm | 2.81e-10 | 95 |
presumptive ectoderm | 2.81e-10 | 95 |
organ system subdivision | 2.99e-10 | 194 |
pre-chordal neural plate | 1.10e-09 | 49 |
cerebral cortex | 5.70e-07 | 21 |
cerebral hemisphere | 5.70e-07 | 21 |
pallium | 5.70e-07 | 21 |