FFCP PHASE1:Mm9::chr12:45430179..45430196,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1623 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:45430179..45430196,+ | |||
|description=CAGE_peak_at_chr12:45430179..45430196,+ | |description=CAGE_peak_at_chr12:45430179..45430196,+ | ||
|id=chr12:45430179..45430196,+ | |id=chr12:45430179..45430196,+ | ||
|ontology_enrichment_celltype=CL:0000221!4.82e-09!44;CL:0000133!4.82e-09!44;CL:0002319!1.90e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,4.93e-09,2;CL:0000328,4.93e-09,2;CL:0002573,4.93e-09,2;CL:0002376,4.93e-09,2;CL:0000218,4.93e-09,2;CL:0000692,4.93e-09,2;CL:0002377,4.93e-09,2;CL:0002375,4.93e-09,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.89e-32!75;UBERON:0001016!1.89e-32!75;UBERON:0000033!3.73e-32!63;UBERON:0001017!3.72e-30!73;UBERON:0005743!3.72e-30!73;UBERON:0004121!6.32e-30!102;UBERON:0000924!6.32e-30!102;UBERON:0006601!6.32e-30!102;UBERON:0000955!1.24e-29!50;UBERON:0006238!1.24e-29!50;UBERON:0002616!1.27e-28!49;UBERON:0001049!9.83e-26!52;UBERON:0005068!9.83e-26!52;UBERON:0006241!9.83e-26!52;UBERON:0007135!9.83e-26!52;UBERON:0002346!2.07e-25!71;UBERON:0003075!2.07e-25!71;UBERON:0007284!2.07e-25!71;UBERON:0003056!3.64e-25!49;UBERON:0003080!1.41e-22!40;UBERON:0002780!1.25e-21!39;UBERON:0001890!1.25e-21!39;UBERON:0006240!1.25e-21!39;UBERON:0007811!1.01e-19!86;UBERON:0000153!1.57e-17!94;UBERON:0002791!5.00e-15!29;UBERON:0003528!5.00e-15!29;UBERON:0001893!5.00e-15!29;UBERON:0002020!3.94e-14!34;UBERON:0000956!6.16e-14!21;UBERON:0001869!6.16e-14!21;UBERON:0000203!6.16e-14!21;UBERON:0002619!4.50e-13!17;UBERON:0002021!7.11e-12!10;UBERON:0000411!7.11e-12!10;UBERON:0001950!7.11e-12!10;UBERON:0004111!6.97e-09!122;UBERON:0000025!3.53e-08!114;UBERON:0001894!1.32e-07!10;UBERON:0006222!1.32e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.52e-29,10;UBERON:0000411,2.52e-29,10;UBERON:0001950,2.52e-29,10;UBERON:0000955,1.04e-21,47;UBERON:0006238,1.04e-21,47;UBERON:0003080,1.65e-20,40;UBERON:0002619,1.69e-20,17;UBERON:0000956,7.58e-20,21;UBERON:0001869,7.58e-20,21;UBERON:0000203,7.58e-20,21;UBERON:0002616,9.55e-20,46;UBERON:0003528,2.51e-19,29;UBERON:0002791,2.51e-19,29;UBERON:0001893,2.51e-19,29;UBERON:0002780,1.64e-18,39;UBERON:0001890,1.64e-18,39;UBERON:0006240,1.64e-18,39;UBERON:0000073,1.66e-18,54;UBERON:0001016,7.41e-18,75;UBERON:0001049,4.27e-17,52;UBERON:0005068,4.27e-17,52;UBERON:0006241,4.27e-17,52;UBERON:0007135,4.27e-17,52;UBERON:0003056,3.52e-16,49;UBERON:0002020,4.03e-16,34;UBERON:0001017,1.93e-14,73;UBERON:0004121,2.72e-13,95;UBERON:0000924,2.72e-13,95;UBERON:0006601,2.72e-13,95;UBERON:0002346,2.78e-13,64;UBERON:0003075,2.78e-13,64;UBERON:0007284,2.78e-13,64;UBERON:0010371,3.05e-11,73;UBERON:0010314,3.02e-08,92;UBERON:0000025,6.43e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0.388859798148567,0.839918529752175,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0.441737081903227,0.244981598429908,0,0,2.20231761998777,0.893811366596314,0.46081959976873,0,0.0914876436024097,0,0.558365998002762,1.12552522006336,0.61119299110724,0,0.284743361598206,0,10.677393259979,6.8014404096107,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.19832511523858,2.74500361691176,0,4.69325664519146,2.55715457330331,2.49345653471472,1.78465389374533,0.101839363850316,0,0,0,0,0.689706313300419,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.514523061896422,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,1.10344600874334,0,0.637819074629948,0,0.518054945597687,0,1.50791283939272,0,0,0,1.12385412991454,0.468846746368813,0,0,0,0,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.428674070063185,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,1.64270195644597,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,2.76195141904306,0.572895513439397,2.40594455281163,5.48066015816514,3.0215755895588,4.72515750162264,3.15224842256954,3.62513927187364,3.62432218226274,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0,0,0,0,0,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0.388859798148567,0.839918529752175,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0.441737081903227,0.244981598429908,0,0,2.20231761998777,0.893811366596314,0.46081959976873,0,0.0914876436024097,0,0.558365998002762,1.12552522006336,0.61119299110724,0,0.284743361598206,0,10.677393259979,6.8014404096107,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.19832511523858,2.74500361691176,0,4.69325664519146,2.55715457330331,2.49345653471472,1.78465389374533,0.101839363850316,0,0,0,0,0.689706313300419,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.514523061896422,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,1.10344600874334,0,0.637819074629948,0,0.518054945597687,0,1.50791283939272,0,0,0,1.12385412991454,0.468846746368813,0,0,0,0,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.428674070063185,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,1.64270195644597,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,2.76195141904306,0.572895513439397,2.40594455281163,5.48066015816514,3.0215755895588,4.72515750162264,3.15224842256954,3.62513927187364,3.62432218226274,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0,0,0,0,0,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr12:45430179..45430196,+ | |short_description=p@chr12:45430179..45430196,+ | ||
}} | }} |
Latest revision as of 01:29, 5 August 2015
Short description: | p@chr12:45430179..45430196, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:45430179..45430196, + |
Coexpression cluster: | MCL_coexpression_mm9:1623 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 4.93e-09 | 2 |
myelin accumulating cell | 4.93e-09 | 2 |
Schwann cell | 4.93e-09 | 2 |
non-myelinating Schwann cell | 4.93e-09 | 2 |
myelinating Schwann cell;;Schwann cell | 4.93e-09 | 2 |
terminal Schwann cell | 4.93e-09 | 2 |
immature Schwann cell | 4.93e-09 | 2 |
Schwann cell precursor | 4.93e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.52e-29 | 10 |
visual cortex | 2.52e-29 | 10 |
neocortex | 2.52e-29 | 10 |
brain | 1.04e-21 | 47 |
future brain | 1.04e-21 | 47 |
anterior neural tube | 1.65e-20 | 40 |
regional part of cerebral cortex | 1.69e-20 | 17 |
cerebral cortex | 7.58e-20 | 21 |
cerebral hemisphere | 7.58e-20 | 21 |
pallium | 7.58e-20 | 21 |
regional part of brain | 9.55e-20 | 46 |
brain grey matter | 2.51e-19 | 29 |
regional part of telencephalon | 2.51e-19 | 29 |
telencephalon | 2.51e-19 | 29 |
regional part of forebrain | 1.64e-18 | 39 |
forebrain | 1.64e-18 | 39 |
future forebrain | 1.64e-18 | 39 |
regional part of nervous system | 1.66e-18 | 54 |
nervous system | 7.41e-18 | 75 |
neural tube | 4.27e-17 | 52 |
neural rod | 4.27e-17 | 52 |
future spinal cord | 4.27e-17 | 52 |
neural keel | 4.27e-17 | 52 |
pre-chordal neural plate | 3.52e-16 | 49 |
gray matter | 4.03e-16 | 34 |
central nervous system | 1.93e-14 | 73 |
ectoderm-derived structure | 2.72e-13 | 95 |
ectoderm | 2.72e-13 | 95 |
presumptive ectoderm | 2.72e-13 | 95 |
neurectoderm | 2.78e-13 | 64 |
neural plate | 2.78e-13 | 64 |
presumptive neural plate | 2.78e-13 | 64 |
ecto-epithelium | 3.05e-11 | 73 |
structure with developmental contribution from neural crest | 3.02e-08 | 92 |
tube | 6.43e-07 | 114 |