FFCP PHASE1:Mm9::chr10:126497314..126497362,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216438 | |EntrezGene=216438 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TZ87 | |UniProt=Q3TZ87 | ||
|association_with_transcript=-74bp_to_ENSMUST00000040307,NM_001033262,uc007hhu.1_5end | |association_with_transcript=-74bp_to_ENSMUST00000040307,NM_001033262,uc007hhu.1_5end | ||
|cluster_id=chr10:126497314..126497362,- | |||
|description=CAGE_peak_2_at_March9_5end | |description=CAGE_peak_2_at_March9_5end | ||
|id=chr10:126497314..126497362,- | |id=chr10:126497314..126497362,- | ||
|ontology_enrichment_celltype=CL:0000540!2.63e-13!33;CL:0000047!2.63e-13!33;CL:0000031!2.63e-13!33;CL:0000404!2.63e-13!33;CL:0000221!3.69e-13!44;CL:0000133!3.69e-13!44;CL:0002319!1.05e-12!43;CL:0000393!6.56e-12!39;CL:0000211!6.56e-12!39;CL:0000055!7.12e-11!50;CL:0000117!7.20e-11!23;CL:0000337!7.20e-11!23 | |ontology_enrichment_celltype=CL:0000540!2.63e-13!33;CL:0000047!2.63e-13!33;CL:0000031!2.63e-13!33;CL:0000404!2.63e-13!33;CL:0000221!3.69e-13!44;CL:0000133!3.69e-13!44;CL:0002319!1.05e-12!43;CL:0000393!6.56e-12!39;CL:0000211!6.56e-12!39;CL:0000055!7.12e-11!50;CL:0000117!7.20e-11!23;CL:0000337!7.20e-11!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.56e-14,33;CL:0000047,8.56e-14,33;CL:0000031,8.56e-14,33;CL:0000404,8.56e-14,33;CL:0000221,5.93e-13,44;CL:0000133,5.93e-13,44;CL:0002319,1.74e-12,43;CL:0000393,3.48e-12,39;CL:0000211,3.48e-12,39;CL:0000117,2.96e-11,23;CL:0000337,2.96e-11,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.64e-26!102;UBERON:0000924!2.64e-26!102;UBERON:0006601!2.64e-26!102;UBERON:0001017!9.14e-24!73;UBERON:0005743!9.14e-24!73;UBERON:0000073!1.65e-22!75;UBERON:0001016!1.65e-22!75;UBERON:0002346!6.91e-19!71;UBERON:0003075!6.91e-19!71;UBERON:0007284!6.91e-19!71;UBERON:0000033!2.05e-17!63;UBERON:0001049!2.95e-17!52;UBERON:0005068!2.95e-17!52;UBERON:0006241!2.95e-17!52;UBERON:0007135!2.95e-17!52;UBERON:0003056!3.21e-16!49;UBERON:0003080!3.17e-15!40;UBERON:0002780!6.64e-15!39;UBERON:0001890!6.64e-15!39;UBERON:0006240!6.64e-15!39;UBERON:0000955!1.26e-14!50;UBERON:0006238!1.26e-14!50;UBERON:0002616!2.17e-14!49;UBERON:0002020!6.21e-13!34;UBERON:0002791!3.31e-10!29;UBERON:0003528!3.31e-10!29;UBERON:0001893!3.31e-10!29;UBERON:0000153!5.45e-09!94;UBERON:0007811!3.16e-08!86;UBERON:0000956!1.59e-07!21;UBERON:0001869!1.59e-07!21;UBERON:0000203!1.59e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.53e-26,95;UBERON:0000924,7.53e-26,95;UBERON:0006601,7.53e-26,95;UBERON:0001017,3.96e-24,73;UBERON:0001016,2.13e-22,75;UBERON:0010371,1.01e-19,73;UBERON:0002346,6.69e-19,64;UBERON:0003075,6.69e-19,64;UBERON:0007284,6.69e-19,64;UBERON:0001049,2.28e-17,52;UBERON:0005068,2.28e-17,52;UBERON:0006241,2.28e-17,52;UBERON:0007135,2.28e-17,52;UBERON:0000073,2.48e-17,54;UBERON:0003056,2.56e-16,49;UBERON:0003080,1.54e-15,40;UBERON:0002780,3.33e-15,39;UBERON:0001890,3.33e-15,39;UBERON:0006240,3.33e-15,39;UBERON:0000955,6.61e-15,47;UBERON:0006238,6.61e-15,47;UBERON:0002616,1.15e-14,46;UBERON:0002020,3.72e-13,34;UBERON:0003528,2.49e-10,29;UBERON:0002791,2.49e-10,29;UBERON:0001893,2.49e-10,29;UBERON:0010314,5.97e-10,92;UBERON:0000956,1.52e-07,21;UBERON:0001869,1.52e-07,21;UBERON:0000203,1.52e-07,21 | |||
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| ||
|short_description=p2@March9 | |short_description=p2@March9 | ||
}} | }} |
Latest revision as of 17:11, 25 September 2015
Short description: | p2@March9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_March9_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -74bp_to_ENSMUST00000040307, NM_001033262, uc007hhu.1_5end |
EntrezGene: | March9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.56e-14 | 33 |
neuronal stem cell | 8.56e-14 | 33 |
neuroblast | 8.56e-14 | 33 |
electrically signaling cell | 8.56e-14 | 33 |
ectodermal cell | 5.93e-13 | 44 |
neurectodermal cell | 5.93e-13 | 44 |
neural cell | 1.74e-12 | 43 |
electrically responsive cell | 3.48e-12 | 39 |
electrically active cell | 3.48e-12 | 39 |
CNS neuron (sensu Vertebrata) | 2.96e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.96e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 7.53e-26 | 95 |
ectoderm | 7.53e-26 | 95 |
presumptive ectoderm | 7.53e-26 | 95 |
central nervous system | 3.96e-24 | 73 |
nervous system | 2.13e-22 | 75 |
ecto-epithelium | 1.01e-19 | 73 |
neurectoderm | 6.69e-19 | 64 |
neural plate | 6.69e-19 | 64 |
presumptive neural plate | 6.69e-19 | 64 |
neural tube | 2.28e-17 | 52 |
neural rod | 2.28e-17 | 52 |
future spinal cord | 2.28e-17 | 52 |
neural keel | 2.28e-17 | 52 |
regional part of nervous system | 2.48e-17 | 54 |
pre-chordal neural plate | 2.56e-16 | 49 |
anterior neural tube | 1.54e-15 | 40 |
regional part of forebrain | 3.33e-15 | 39 |
forebrain | 3.33e-15 | 39 |
future forebrain | 3.33e-15 | 39 |
brain | 6.61e-15 | 47 |
future brain | 6.61e-15 | 47 |
regional part of brain | 1.15e-14 | 46 |
gray matter | 3.72e-13 | 34 |
brain grey matter | 2.49e-10 | 29 |
regional part of telencephalon | 2.49e-10 | 29 |
telencephalon | 2.49e-10 | 29 |
structure with developmental contribution from neural crest | 5.97e-10 | 92 |
cerebral cortex | 1.52e-07 | 21 |
cerebral hemisphere | 1.52e-07 | 21 |
pallium | 1.52e-07 | 21 |