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FFCP PHASE1:Mm9::chr11:29273618..29273723,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108686
|EntrezGene=108686
|HGNC=
|HGNC=
|MCL_coexpression_id=782
|TSSclassifier=NA
|UniProt=Q5SNZ0
|UniProt=Q5SNZ0
|association_with_transcript=0bp_to_ENSMUST00000040182_5end
|association_with_transcript=0bp_to_ENSMUST00000040182_5end
|cluster_id=chr11:29273618..29273723,+
|description=CAGE_peak_1_at_Ccdc88a_5end
|description=CAGE_peak_1_at_Ccdc88a_5end
|id=chr11:29273618..29273723,+
|id=chr11:29273618..29273723,+
|ontology_enrichment_celltype=CL:0000117!7.86e-07!23;CL:0000337!7.86e-07!23
|ontology_enrichment_celltype=CL:0000117!7.86e-07!23;CL:0000337!7.86e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,7.82e-07,23;CL:0000337,7.82e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.74e-13!71;UBERON:0003075!2.74e-13!71;UBERON:0007284!2.74e-13!71;UBERON:0001017!7.42e-13!73;UBERON:0005743!7.42e-13!73;UBERON:0001049!9.72e-13!52;UBERON:0005068!9.72e-13!52;UBERON:0006241!9.72e-13!52;UBERON:0007135!9.72e-13!52;UBERON:0000033!1.50e-12!63;UBERON:0003056!1.71e-12!49;UBERON:0000073!3.30e-12!75;UBERON:0001016!3.30e-12!75;UBERON:0000955!2.27e-11!50;UBERON:0006238!2.27e-11!50;UBERON:0002020!5.20e-11!34;UBERON:0002616!8.62e-11!49;UBERON:0004121!1.98e-10!102;UBERON:0000924!1.98e-10!102;UBERON:0006601!1.98e-10!102;UBERON:0003080!7.90e-10!40;UBERON:0002780!2.18e-09!39;UBERON:0001890!2.18e-09!39;UBERON:0006240!2.18e-09!39;UBERON:0000153!3.58e-09!94;UBERON:0002791!1.47e-08!29;UBERON:0003528!1.47e-08!29;UBERON:0001893!1.47e-08!29;UBERON:0007811!1.76e-07!86;UBERON:0002021!3.29e-07!10;UBERON:0000411!3.29e-07!10;UBERON:0001950!3.29e-07!10;UBERON:0000956!6.63e-07!21;UBERON:0001869!6.63e-07!21;UBERON:0000203!6.63e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.05e-15,64;UBERON:0003075,4.05e-15,64;UBERON:0007284,4.05e-15,64;UBERON:0000073,3.64e-13,54;UBERON:0001017,8.32e-13,73;UBERON:0010371,8.53e-13,73;UBERON:0001049,1.11e-12,52;UBERON:0005068,1.11e-12,52;UBERON:0006241,1.11e-12,52;UBERON:0007135,1.11e-12,52;UBERON:0003056,1.96e-12,49;UBERON:0001016,3.69e-12,75;UBERON:0004121,1.78e-11,95;UBERON:0000924,1.78e-11,95;UBERON:0006601,1.78e-11,95;UBERON:0002020,6.04e-11,34;UBERON:0010314,8.56e-11,92;UBERON:0000955,2.55e-10,47;UBERON:0006238,2.55e-10,47;UBERON:0003080,9.00e-10,40;UBERON:0002616,9.37e-10,46;UBERON:0002780,2.48e-09,39;UBERON:0001890,2.48e-09,39;UBERON:0006240,2.48e-09,39;UBERON:0003528,1.70e-08,29;UBERON:0002791,1.70e-08,29;UBERON:0001893,1.70e-08,29;UBERON:0002021,3.27e-07,10;UBERON:0000411,3.27e-07,10;UBERON:0001950,3.27e-07,10;UBERON:0000956,7.66e-07,21;UBERON:0001869,7.66e-07,21;UBERON:0000203,7.66e-07,21
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|phase1_expression=14.8938427807458,0,0,0,0,0.839396359559449,0.700837921786577,3.87369970324729,0.84473233291,3.04283884218592,0.513653904676515,2.15384829287408,0.342401459862411,2.36035086531293,8.99396356902289,10.5287139042709,9.09430441566591,3.62781490161973,5.48457734422955,3.81950686618227,24.8326407241124,0.595745707205312,0,1.27993938234725,1.14704640533585,0,0,0,0,0.252030129759931,0,6.98533740805594,4.30545351309199,0,0.288851619751275,0,0,6.69650609179052,8.5946887897618,5.23523743973798,3.52938892818609,4.09827290975067,6.311634589405,9.9458486200706,10.3404469843905,13.2153661556411,7.04152209913235,1.96222640742402,0.878744730937887,4.27745777963423,2.79972843250725,1.43752564364972,2.85230430298152,0,0.336093799142464,6.17422646486273,6.30373567865265,8.25075347643908,23.8733423814325,16.9277113367051,22.1840991227163,2.71075625655306,2.66788438833342,5.84934816232909,5.93319817540185,1.4209602298922,5.69240209984969,7.68436610643109,19.7010263386108,12.1505344498522,17.4569717921647,20.5668708770739,21.6451170132581,27.6829206225796,15.3352753629178,11.9498442259303,18.7196997698961,22.2175968268227,21.5049146558741,16.7495585417346,14.5465353327831,16.1483144872596,12.8424179540635,17.4456409109821,23.6837284054056,53.9170311416812,44.277592728521,28.519115211271,6.6639050133202,8.08615693142605,7.24661221754194,5.16254326188832,0.679971333707751,0.539703191637817,0.649776417447669,0,6.17955448579708,15.6795896771813,4.67614808285164,11.3068663843309,10.2815696436977,20.5322363862909,20.3844191765317,28.4426681261332,3.030874574157,1.52015919285059,3.0331466700887,7.65031994117702,17.0899003207133,11.1331604298619,10.235634279202,7.30717147949139,6.6878494204257,8.74191315205211,11.7588707135705,6.40899615781345,3.46072954828123,10.5557530551536,19.4614321428972,17.794353494215,10.1587098491781,10.1823803158397,1.86391761218122,15.2246014446005,21.154117388159,2.04365644166873,10.543730956521,10.7982491578813,8.51370521389534,23.666921025962,23.33253074375,42.8481340704868,27.4642425903797,29.6629930503183,20.5710164113964,22.5515355664183,15.5814226690984,12.5651040316194,3.79084137650512,6.94458124425364,21.7301139747715,21.8406999211799,20.1669585381991,23.3592467645358,33.4739575824533,34.2063633160549,28.3916225415978,12.9351685369508,9.26942369611222,34.7955187508787,29.3838377353795,18.4124415239163,23.0779216857246,18.805616992197,14.1989674121481,15.723707078661,4.21327912387941,4.37491442095016,9.09323198065896,18.8484453007307,13.1334593589414,13.6847166710371,19.6498130535725,13.9702604540657,13.4212388212019,10.4640275137684,13.6819434713806,10.0418194435766,9.37991144506839,12.148392341853,9.72825714550269,6.28659945928929,7.68425403518677,5.77087600669599,21.2392848049769,38.5892296422317,0.330418782983798,1.32225283331772,16.423195291213,16.2565670302307,13.6599509001419,9.4791256572971,9.11749979763968,7.22857379227725,2.37264530772256,3.45867804920423,6.53471542880701,7.36138946552258,6.43381487493096,5.39291645192533,3.24207074812041,2.38969527905241,5.69003702859245,15.1950521770939,11.270773567308,17.514014194697,11.6371492300575,13.1153983194896,11.7619959051119,6.4948465111025,6.12295038581362,3.33172342588861,0.592905254174298,9.00963570866908,6.6830058338489,5.39669069723649,7.50582449137461,8.20002343158217,5.34714288740982,3.45235364940973,3.72911021582581,3.56929837144506,8.62609239164127,6.69853705803306,3.43241440426017,4.04126204715379,1.61457672169721,1.92977408545347,10.5309318394965,20.6545638829828,20.5335870316953,16.4652733201932,18.0711491182147,12.730475565578,13.5684875305028,13.8544889979037,20.3349335896986,16.1669223443606,17.0616602463511,11.3065687153859,11.0518388394173,9.83613598354279,10.5553898757491,5.98296252200581,3.44234991113325,4.69092468718045,20.5504755184374,23.2079139452562,7.37707254195039,5.55436039849621,9.14973836307144,10.1514073517126,16.5876016254255,8.12493913038677,14.0363164671908,17.5507449089076,10.9298889452221,15.4895604692995,15.8115111178609,47.5555548304274,16.3231097989509,11.5742642383716,15.8000350572969,15.0122811905007,1.32745138339963,8.01176099311439,6.95344181018927,5.84675747243284,4.42952839321159,14.1420168054207,11.8877014857382,10.5424781548477,8.55593708123331,5.37262488490887,3.16255825724996,1.03135543248187,21.4476951624886,20.1668425315067,5.17434735131018,12.2172109968008,26.4236948126988,20.334045206636,19.2522354104482,1.8267896946876,5.86679270159276,4.02480934641258,2.42581237860458,9.39851641766436,15.9849782428946,10.2531972377865,6.68485126417564,7.87876318776294,3.49777003955821,31.5223013417866,11.619219894254,14.2406938894624,10.926477114813,8.85331747922048,10.5254555345189,8.23601423543482,11.2185763795945,10.636310376598,9.81219814011409,0,16.9239756565907,16.4688768372747,11.4485661271109,11.4998562807958,8.51613998610093,10.3845546716312,10.083721598491,3.14107130380836,2.72191443912765,2.4853572523477,88.4997913734179,20.4837668080251,13.4021377270249,21.0007283411571,13.8201011121172,18.0783054275133,16.6647278876971,21.4837234992518,22.9641964292307,50.4910812526353,61.0623613266675,9.48033361884535,8.71718425747706,6.88163413004343,8.18501184760109,12.8899220880587,12.1195626416572,10.6973950072772,8.4183030489509,10.0966449948148,11.507227804905,8.26774718122092,6.1398464866044,5.09922760693746,5.02570679380746,2.49403421976732,3.32978930061097,4.57540668708326,3.02192309455341,6.18206700903009,9.75948872346146,12.454310450174,4.28736758158132,4.01257683228291,37.2736216127264,34.0640675015311,31.5092532391668,27.8402155396774,29.4585483501376,33.2373314851468,27.675922509504,28.3702358031259,31.7199686288943,26.4057758993428,19.0968719554885,33.5180893656866,23.3905039883164,23.8244582726928,18.4459583112624,19.4874118957015,17.335244768526,22.2517861818006,20.5388294138762,20.2157769411038,18.5039888919875,23.3896663318734,21.3502637031332,24.3295579138503,25.6162191542035,28.5776214769844,23.0609808630262,19.6767404872979,19.3680373377554,22.5214347805628,18.172070376427,16.5052499728184,21.4592570952589,20.784537578423,17.9748916593281,18.3613699124938,14.8171658026946,13.6796249947678,17.5187306861162,17.9565526930476,21.3543032623513,21.7694906049995,19.2338590289754,20.6065998777335,19.4835677090953,17.2369298777183,19.6502551094143,18.693781702202,20.0852748672286,12.3531194706929,12.7527309591232
|short_description=p1@Ccdc88a
|short_description=p1@Ccdc88a
}}
}}

Latest revision as of 06:14, 27 September 2015

Short description:p1@Ccdc88a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccdc88a_5end
Coexpression cluster:MCL_coexpression_mm9:782
Association with transcript: 0bp_to_ENSMUST00000040182_5end
EntrezGene:Ccdc88a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ccdc88a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.53
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.48
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.95
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.34
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C323.87
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C722.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.15
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D227.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D653.92
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F644.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.52
Mouse Schwann, donor1.CNhs12507.11728-123D96.66
Mouse Schwann, donor2.CNhs12573.11746-123F98.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I715.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.65
accessory axillary lymph node, adult.CNhs10475.1063-29H917.09
adrenal gland, adult.CNhs10508.49-24D711.13
adrenal gland, embryo E14.CNhs11038.406-44C510.24
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I16.69
adrenal gland, embryo E18.CNhs11026.1262-18F58.74
adrenal gland, neonate N00.CNhs11191.1311-23C111.76
adrenal gland, neonate N25.CNhs11223.1377-27I36.41
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H110.56
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F517.79
bone (os femoris), neonate N16.CNhs11225.1525-43A610.16
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I221.15
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.54
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.51
corpora quadrigemina, adult.CNhs10501.16-22A423.67
corpus striatum, adult.CNhs10487.19-21D823.33
corpus striatum, neonate N00.CNhs11226.630-43F142.85
cortex, adult.CNhs10473.12-14D527.46
cortex, neonate N30.CNhs11107.1392-42F229.66
diencephalon, adult.CNhs10482.20-12F220.57
diencephalon, neonate N30.CNhs11201.1388-42B222.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.57
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C621.73
eyeball, embryo E14.CNhs10521.399-16E221.84
eyeball, embryo E15.CNhs10593.426-16C920.17
eyeball, embryo E17.CNhs11023.1261-18D423.36
eyeball, neonate N00.CNhs11207.633-15C633.47
eyeball, neonate N01.CNhs11140.1532-43E734.21
eyeball, neonate N02.CNhs11205.1551-44G828.39
eyeball, neonate N16.CNhs11188.777-19A212.94
forelimb, embryo E11.CNhs10596.335-25E29.27
forelimb, embryo E12.CNhs10600.359-14H234.80
forelimb, embryo E13.CNhs10589.384-1E229.38
forelimb, embryo E14.CNhs10577.413-26A818.41
forelimb, embryo E15.CNhs11007.437-20E723.08
forelimb, embryo E17.CNhs10598.1517-43C418.81
forelimb, embryo E18.CNhs11008.1520-43B514.20
gonad, embryo E13.CNhs11044.1564-45I615.72
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.09
heart, embryo E11.CNhs10586.331-24E918.85
heart, embryo E12.CNhs11015.353-12F513.13
heart, embryo E13.CNhs11013.376-3I913.68
heart, embryo E14.CNhs10597.403-26D419.65
heart, embryo E15.CNhs11017.431-16C813.97
heart, embryo E16.CNhs11021.457-17C613.42
heart, embryo E17.CNhs11025.479-18E510.46
heart, embryo E18.CNhs11030.1283-20G313.68
heart, neonate N00.CNhs11213.639-21E310.04
heart, neonate N03.CNhs11221.1349-25I29.38
heart, neonate N10.CNhs11118.749-24G112.15
heart, neonate N16.CNhs11209.782-15G19.73
heart, neonate N20.CNhs11127.821-26I66.29
heart, neonate N25.CNhs11196.1351-25D37.68
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E821.24
hippocampus, neonate N00.CNhs11228.627-43G138.59
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I516.42
intestine, embryo E13.CNhs11010.381-16D516.26
intestine, embryo E15.CNhs10602.976-16D813.66
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F77.23
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I95.69
kidney, embryo E15.CNhs10997.434-16F815.20
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I217.51
kidney, embryo E18.CNhs11001.1288-20C711.64
kidney, neonate N00.CNhs11214.646-21G713.12
kidney, neonate N10.CNhs11206.758-6D511.76
kidney, neonate N20.CNhs11113.832-19I16.49
kidney, neonate N25.CNhs11122.1353-25F36.12
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F89.01
liver, embryo E13.CNhs10524.378-3H66.68
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D77.51
liver, embryo E16.CNhs10523.462-17F58.20
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H26.70
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B110.53
lung, embryo E12.CNhs10522.354-16G220.65
lung, embryo E14.CNhs10604.404-26F820.53
lung, embryo E15.CNhs11020.432-17C516.47
lung, embryo E16.CNhs10998.458-17B618.07
lung, embryo E17.CNhs10605.480-44A612.73
lung, embryo E18.CNhs10583.1287-20I613.57
lung, neonate N00.CNhs11224.640-42C613.85
lung, neonate N06.CNhs11212.683-20E520.33
lung, neonate N07.CNhs11111.715-19A316.17
lung, neonate N10.CNhs11219.750-23E617.06
lung, neonate N20.CNhs11109.822-18A411.31
lung, neonate N25.CNhs11119.1359-25C711.05
lung, neonate N30.CNhs11133.1394-42H29.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C220.55
medulla oblongata, neonate N30.CNhs11200.1396-42A323.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.38
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.15
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.49
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I947.56
ovary, adult.CNhs10507.91-2I716.32
ovary, embryo E18.CNhs11040.505-44H711.57
ovary, neonate N00.CNhs11217.1299-22I415.80
oviduct, adult pregnant day01.CNhs10500.988-6G615.01
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F48.01
pancreas, embryo E15.CNhs11042.1556-45F26.95
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I714.14
pancreas, neonate N00.CNhs11105.645-26G911.89
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G821.45
pituitary gland, embryo E12.CNhs11018.346-16E620.17
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A512.22
pituitary gland, embryo E15.CNhs10592.427-16B926.42
pituitary gland, embryo E16.CNhs11036.449-43F620.33
pituitary gland, embryo E17.CNhs11039.1265-44F519.25
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C39.40
skin, neonate N00.CNhs11124.650-25G415.98
skin, neonate N03.CNhs11215.662-22H310.25
skin, neonate N06.CNhs11097.693-20I56.68
skin, neonate N10.CNhs11108.762-6C47.88
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C931.52
spleen, adult.CNhs10465.25-2G211.62
spleen, embryo E16.CNhs11035.461-43C114.24
spleen, embryo E18.CNhs11011.1271-21F210.93
spleen, neonate N10.CNhs11116.752-24D18.85
spleen, neonate N20.CNhs11112.824-19H110.53
spleen, neonate N25.CNhs11099.1354-25G38.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.81
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E316.92
stomach, embryo E15.CNhs10603.1252-16G816.47
stomach, embryo E16.CNhs11022.459-17D411.45
stomach, embryo E17.CNhs11006.1035-18D511.50
stomach, embryo E18.CNhs10999.1286-20C68.52
stomach, neonate N03.CNhs11193.1340-24B810.38
stomach, neonate N07.CNhs11210.718-18A910.08
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I12.72
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G588.50
testis, embryo E13.CNhs11031.389-23F520.48
testis, embryo E15.CNhs11034.443-27C513.40
testis, embryo E16.CNhs11033.470-26G521.00
testis, embryo E17.CNhs11029.486-18I513.82
testis, embryo E18.CNhs11027.503-18G518.08
testis, neonate N00.CNhs11189.1300-22B716.66
testis, neonate N07.CNhs11222.726-26I421.48
testis, neonate N10.CNhs11204.763-44D922.96
testis, neonate N20.CNhs11110.839-18H350.49
testis, neonate N30.CNhs11130.1391-42E261.06
thymus, adult.CNhs10471.38-12B59.48
thymus, embryo E14.CNhs11041.402-44I48.72
thymus, embryo E15.CNhs11005.430-45I26.88
thymus, embryo E16.CNhs11002.456-26C58.19
thymus, embryo E17.CNhs10581.478-18C112.89
thymus, embryo E18.CNhs10595.1273-19G412.12
thymus, neonate N02.CNhs11181.1541-43F810.70
thymus, neonate N03.CNhs11137.2104-43C78.42
thymus, neonate N06.CNhs11197.681-26C410.10
thymus, neonate N07.CNhs11211.713-19D311.51
thymus, neonate N10.CNhs11194.748-24E48.27
thymus, neonate N20.CNhs11186.820-7A26.14
thymus, neonate N25.CNhs11125.1362-25G75.10
thymus, neonate N30.CNhs11132.1393-42G25.03
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.58
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F59.76
uterus, adult.CNhs10509.92-27E512.45
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A331.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D727.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A429.46
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.37
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.41
whole body, embryo E11.CNhs11014.324-5I819.10
whole body, embryo E12.CNhs10587.857-27C933.52
whole body, embryo E13.CNhs10512.372-23H223.39
whole body, embryo E14.5.CNhs10578.420-27D223.82
whole body, embryo E14.CNhs10519.395-14B118.45
whole body, embryo E16.CNhs10514.453-14F219.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.54
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.50
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.39
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.35
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.52
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.46
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.97
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.35
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.61
whole body, embryo E17.5.CNhs10513.490-9F919.48
whole body, embryo E17.CNhs10517.475-3I517.24
whole body, embryo E18.CNhs10516.493-3B319.65
whole body, neonate N00.CNhs10525.657-19C218.69
whole body, neonate N01.CNhs10576.659-23C620.09
whole body, neonate N06.CNhs10515.692-21D112.35
whole body, neonate N10.CNhs10518.761-6B412.75





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.82e-0723
neuroblast (sensu Vertebrata)7.82e-0723

Uber anatomy
Ontology termp-valuen
neurectoderm4.05e-1564
neural plate4.05e-1564
presumptive neural plate4.05e-1564
regional part of nervous system3.64e-1354
central nervous system8.32e-1373
ecto-epithelium8.53e-1373
neural tube1.11e-1252
neural rod1.11e-1252
future spinal cord1.11e-1252
neural keel1.11e-1252
pre-chordal neural plate1.96e-1249
nervous system3.69e-1275
ectoderm-derived structure1.78e-1195
ectoderm1.78e-1195
presumptive ectoderm1.78e-1195
gray matter6.04e-1134
structure with developmental contribution from neural crest8.56e-1192
brain2.55e-1047
future brain2.55e-1047
anterior neural tube9.00e-1040
regional part of brain9.37e-1046
regional part of forebrain2.48e-0939
forebrain2.48e-0939
future forebrain2.48e-0939
brain grey matter1.70e-0829
regional part of telencephalon1.70e-0829
telencephalon1.70e-0829
occipital lobe3.27e-0710
visual cortex3.27e-0710
neocortex3.27e-0710
cerebral cortex7.66e-0721
cerebral hemisphere7.66e-0721
pallium7.66e-0721
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